RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 PLXNA1Q9UIW2 1896 aa10.4□□□□□ -0.74
SMG9-202ENST00000594081 KIAA0355O15063 1070 aa10.4□□□□□ -0.74
SMG9-202ENST00000594081 PQBP1O60828 265 aaKnown RBP10.4□□□□□ -0.74
SMG9-202ENST00000594081 COBLO75128 1261 aa10.4□□□□□ -0.74
SMG9-202ENST00000594081 RAG1P15918 1043 aa10.4□□□□□ -0.74
SMG9-202ENST00000594081 ADAMTS19Q8TE59 1207 aa10.4□□□□□ -0.74
SMG9-202ENST00000594081 TIFAQ96CG3 184 aa10.4□□□□□ -0.74
SMG9-202ENST00000594081 XPNPEP3Q9NQH7 507 aa10.4□□□□□ -0.74
SMG9-202ENST00000594081 GBF1Q92538 1859 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 A0A1W2PQ45 241 aaPredicted RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 A0A1W2PQY0 241 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 STRNO43815 780 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 ERCC3P19447 782 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 DYNLL1P63167 89 aaKnown RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 ABCB5Q2M3G0 1257 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 TTC39AQ5SRH9 613 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 PRAMEF19Q5SWL8 479 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 SHCBP1Q8NEM2 672 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 ATXN2LQ8WWM7 1075 aaKnown RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 PPM1EQ8WY54 764 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 FAM122AQ96E09 287 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 MAML3Q96JK9 1138 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 GAS2L1Q99501 681 aaPredicted RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 API5Q9BZZ5 524 aaKnown RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 TANGO6Q9C0B7 1094 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 SPATC1LQ9H0A9 340 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 EHD4Q9H223 541 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 SERPINB13Q9UIV8 391 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 NOB1Q9ULX3 412 aaKnown RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 COL11A1P12107 1806 aaPredicted RBP10.39□□□□□ -0.75
SMG9-202ENST00000594081 MYH8P13535 1937 aa10.39□□□□□ -0.75
SMG9-202ENST00000594081 ANP32CO43423 234 aa10.38□□□□□ -0.75
SMG9-202ENST00000594081 CYP2E1P05181 493 aaPredicted RBP10.38□□□□□ -0.75
SMG9-202ENST00000594081 RARBP10826 455 aa10.38□□□□□ -0.75
SMG9-202ENST00000594081 CERKLQ49MI3 558 aaPredicted RBP10.38□□□□□ -0.75
SMG9-202ENST00000594081 ASB2Q96Q27 587 aa10.38□□□□□ -0.75
SMG9-202ENST00000594081 UHRF1Q96T88 793 aaPredicted RBP10.38□□□□□ -0.75
SMG9-202ENST00000594081 PIH1D3Q9NQM4 214 aaKnown RBP10.38□□□□□ -0.75
SMG9-202ENST00000594081 TMEM39AQ9NV64 488 aa10.38□□□□□ -0.75
SMG9-202ENST00000594081 SLC5A4Q9NY91 659 aa10.38□□□□□ -0.75
SMG9-202ENST00000594081 NCOR1O75376 2440 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 ZNFX1Q9P2E3 1918 aaKnown RBP10.37□□□□□ -0.75
SMG9-202ENST00000594081 BDP1A6H8Y1 2624 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 SMCHD1A6NHR9 2005 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 PGK1P00558 417 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 GNAI3P08754 354 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 CYP7A1P22680 504 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 GUCY1A2P33402 732 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 SHMT1P34896 483 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 PBX2P40425 430 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 USP5P45974 858 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 SLFN5Q08AF3 891 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 MAP3K12Q12852 859 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 COG2Q14746 738 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 AKNAD1Q5T1N1 836 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 RNF180Q86T96 592 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 NCAPG2Q86XI2 1143 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 ABRAQ8N0Z2 381 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 MIGA1Q8NAN2 632 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 LENG1Q96BZ8 264 aaPredicted RBP10.37□□□□□ -0.75
SMG9-202ENST00000594081 DBNDD2Q9BQY9 259 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMG9-202ENST00000594081 PRDM12Q9H4Q4 367 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 CABP5Q9NP86 173 aa10.37□□□□□ -0.75
SMG9-202ENST00000594081 PNMA6EA0A0J9YXQ4 647 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 A0A1W2PRG0 241 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 IGSF3O75054 1194 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 ZAP70P43403 619 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 MRPS5P82675 430 aaKnown RBP10.36□□□□□ -0.75
SMG9-202ENST00000594081 FAAP100Q0VG06 881 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 PLS1Q14651 629 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 SEPT2Q15019 361 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 TNNI3KQ59H18 835 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 CCDC158Q5M9N0 1113 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 ANKRD33Q7Z3H0 272 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 MB21D1Q8N884 522 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 IL27Q8NEV9 243 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 PBX4Q9BYU1 374 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 MROH8Q9H579 483 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 HOXC10Q9NYD6 342 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 FPGT-TNNI3KV9GXZ4 949 aa10.36□□□□□ -0.75
SMG9-202ENST00000594081 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 ADAMTS4O75173 837 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 IDH1O75874 414 aaKnown RBP10.35□□□□□ -0.75
SMG9-202ENST00000594081 FCER1AP12319 257 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 AKR1A1P14550 325 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 PLCD1P51178 756 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 G3BP1Q13283 466 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMG9-202ENST00000594081 ADGRE1Q14246 886 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 CCDC129Q6ZRS4 1044 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 TTC6Q86TZ1 520 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 CERS3Q8IU89 383 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 SLC44A5Q8NCS7 719 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 ATG4CQ96DT6 458 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 STARD7Q9NQZ5 370 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 TBX21Q9UL17 535 aa10.35□□□□□ -0.75
SMG9-202ENST00000594081 SYNRGQ9UMZ2 1314 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms