RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZC3H4Q9UPT8 1303 aaKnown RBP24.15■■□□□ 1.46
PNKP-203ENST00000593946 DDX11L8A8MPP1 907 aa24.14■■□□□ 1.45
PNKP-203ENST00000593946 UBE2Q2LH0YL09 131 aa24.14■■□□□ 1.45
PNKP-203ENST00000593946 DEXIO95424 95 aa24.14■■□□□ 1.45
PNKP-203ENST00000593946 HIRAP54198 1017 aaPredicted RBP24.14■■□□□ 1.45
PNKP-203ENST00000593946 FERMT3Q86UX7 667 aa24.14■■□□□ 1.45
PNKP-203ENST00000593946 APOBEC3FQ8IUX4 373 aaKnown RBP24.14■■□□□ 1.45
PNKP-203ENST00000593946 CHAMP1Q96JM3 812 aa24.14■■□□□ 1.45
PNKP-203ENST00000593946 PALM3A6NDB9 673 aaPredicted RBP24.13■■□□□ 1.45
PNKP-203ENST00000593946 PRPF3O43395 683 aaKnown RBP24.13■■□□□ 1.45
PNKP-203ENST00000593946 LMOD1P29536 600 aaPredicted RBP24.13■■□□□ 1.45
PNKP-203ENST00000593946 GNAQP50148 359 aa24.13■■□□□ 1.45
PNKP-203ENST00000593946 SEPT2Q15019 361 aa24.13■■□□□ 1.45
PNKP-203ENST00000593946 ANGEL2Q5VTE6 544 aaKnown RBP24.13■■□□□ 1.45
PNKP-203ENST00000593946 STAG2Q8N3U4 1231 aa24.13■■□□□ 1.45
PNKP-203ENST00000593946 DEFB129Q9H1M3 183 aa24.13■■□□□ 1.45
PNKP-203ENST00000593946 NYAP2Q9P242 653 aa24.13■■□□□ 1.45
PNKP-203ENST00000593946 JAG1P78504 1218 aa24.13■■□□□ 1.45
PNKP-203ENST00000593946 RESTQ13127 1097 aa24.13■■□□□ 1.45
PNKP-203ENST00000593946 LRRC47Q8N1G4 583 aaKnown RBP24.13■■□□□ 1.45
PNKP-203ENST00000593946 MKL1Q969V6 931 aa24.13■■□□□ 1.45
PNKP-203ENST00000593946 GH2P01242 217 aa24.12■■□□□ 1.45
PNKP-203ENST00000593946 SNHG28P0DPA3 235 aa24.12■■□□□ 1.45
PNKP-203ENST00000593946 GUCY1B3Q02153 619 aa24.12■■□□□ 1.45
PNKP-203ENST00000593946 MCTP1Q6DN14 999 aa24.12■■□□□ 1.45
PNKP-203ENST00000593946 MIGA2Q7L4E1 593 aa24.12■■□□□ 1.45
PNKP-203ENST00000593946 RASGRP2Q7LDG7 609 aa24.12■■□□□ 1.45
PNKP-203ENST00000593946 ZSCAN16Q9H4T2 348 aaPredicted RBP24.12■■□□□ 1.45
PNKP-203ENST00000593946 CABP5Q9NP86 173 aa24.12■■□□□ 1.45
PNKP-203ENST00000593946 ADARB2Q9NS39 739 aaKnown RBP24.12■■□□□ 1.45
PNKP-203ENST00000593946 GJB4Q9NTQ9 266 aa24.12■■□□□ 1.45
PNKP-203ENST00000593946 PDHBP11177 359 aa24.11■■□□□ 1.45
PNKP-203ENST00000593946 EEF2P13639 858 aaKnown RBP24.11■■□□□ 1.45
PNKP-203ENST00000593946 ICA1Q05084 483 aa24.11■■□□□ 1.45
PNKP-203ENST00000593946 FOXD4L6Q3SYB3 417 aaPredicted RBP24.11■■□□□ 1.45
PNKP-203ENST00000593946 OTUD7BQ6GQQ9 843 aa24.11■■□□□ 1.45
PNKP-203ENST00000593946 DPY19L2Q6NUT2 758 aa24.11■■□□□ 1.45
PNKP-203ENST00000593946 FOXD4L3Q6VB84 417 aaPredicted RBP24.11■■□□□ 1.45
PNKP-203ENST00000593946 L3MBTL3Q96JM7 780 aaPredicted RBP24.11■■□□□ 1.45
PNKP-203ENST00000593946 GGA3Q9NZ52 723 aa24.11■■□□□ 1.45
PNKP-203ENST00000593946 MTMR7Q9Y216 660 aa24.11■■□□□ 1.45
PNKP-203ENST00000593946 SCN4AP35499 1836 aa24.1■■□□□ 1.45
PNKP-203ENST00000593946 GOLGA6L22H0YM25 854 aa24.1■■□□□ 1.45
PNKP-203ENST00000593946 PARP1P09874 1014 aaKnown RBP24.1■■□□□ 1.45
PNKP-203ENST00000593946 AKAP17AQ02040 695 aaKnown RBP24.1■■□□□ 1.45
PNKP-203ENST00000593946 PKN1Q16512 942 aa24.1■■□□□ 1.45
PNKP-203ENST00000593946 SIAH1Q8IUQ4 282 aa24.1■■□□□ 1.45
PNKP-203ENST00000593946 LZTS2Q9BRK4 669 aa24.1■■□□□ 1.45
PNKP-203ENST00000593946 PITPNM2Q9BZ72 1349 aa24.1■■□□□ 1.45
PNKP-203ENST00000593946 KRT40Q6A162 431 aa24.1■■□□□ 1.45
PNKP-203ENST00000593946 USP17L2Q6R6M4 530 aa24.1■■□□□ 1.45
PNKP-203ENST00000593946 V9GY48 417 aaPredicted RBP24.1■■□□□ 1.45
PNKP-203ENST00000593946 USP17L5A8MUK1 530 aa24.09■■□□□ 1.45
PNKP-203ENST00000593946 ATP2B2Q01814 1243 aa24.09■■□□□ 1.45
PNKP-203ENST00000593946 RBM27Q9P2N5 1060 aaKnown RBP24.09■■□□□ 1.45
PNKP-203ENST00000593946 PHF20L1A8MW92 1017 aa24.08■■□□□ 1.45
PNKP-203ENST00000593946 KLRF2D3W0D1 207 aa24.08■■□□□ 1.45
PNKP-203ENST00000593946 CAP2P40123 477 aa24.08■■□□□ 1.45
PNKP-203ENST00000593946 SLC35G1Q2M3R5 365 aa24.08■■□□□ 1.45
PNKP-203ENST00000593946 ASPRV1Q53RT3 343 aa24.08■■□□□ 1.45
PNKP-203ENST00000593946 SPZ1Q9BXG8 430 aa24.08■■□□□ 1.45
PNKP-203ENST00000593946 ZBTB21Q9ULJ3 1066 aa24.08■■□□□ 1.45
PNKP-203ENST00000593946 GOLGA8HP0CJ92 632 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 DNM1Q05193 864 aaKnown RBP24.07■■□□□ 1.44
PNKP-203ENST00000593946 TRIM29Q14134 588 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 PPP2R3BQ9Y5P8 575 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 DOCK1Q14185 1865 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 hCG_1642624A0A1W2PR95 340 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 CYTH3O43739 400 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 PTMSP20962 102 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 SMARCA1P28370 1054 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 NBPF12Q5TAG4 269 aaPredicted RBP24.07■■□□□ 1.44
PNKP-203ENST00000593946 SYNPO2Q9UMS6 1093 aa24.07■■□□□ 1.44
PNKP-203ENST00000593946 GLTPD2A6NH11 291 aa24.06■■□□□ 1.44
PNKP-203ENST00000593946 FAM173BQ6P4H8 233 aa24.06■■□□□ 1.44
PNKP-203ENST00000593946 KIF23Q02241 960 aaPredicted RBP24.05■■□□□ 1.44
PNKP-203ENST00000593946 ZNF543Q08ER8 600 aa24.05■■□□□ 1.44
PNKP-203ENST00000593946 PFKFB3Q16875 520 aaPredicted RBP24.05■■□□□ 1.44
PNKP-203ENST00000593946 CNPY2Q9Y2B0 182 aa24.05■■□□□ 1.44
PNKP-203ENST00000593946 MMP1P03956 469 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 SCG2P13521 617 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 GMCL1P1Q8NEA9 526 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 SHISA4Q96DD7 197 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 HOOK2Q96ED9 719 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 LMBRD1Q9NUN5 540 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 WDR90Q96KV7 1748 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 ASNSP08243 561 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 GPATCH4Q5T3I0 446 aaKnown RBP24.04■■□□□ 1.44
PNKP-203ENST00000593946 DCAF15Q66K64 600 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 TMEM87AQ8NBN3 555 aa24.04■■□□□ 1.44
PNKP-203ENST00000593946 FRMPD2Q68DX3 1309 aaPredicted RBP24.03■■□□□ 1.44
PNKP-203ENST00000593946 A0A1W2PRG0 241 aa24.03■■□□□ 1.44
PNKP-203ENST00000593946 KIF28PB7ZC32 967 aa24.03■■□□□ 1.44
PNKP-203ENST00000593946 XBP1P17861 261 aa24.03■■□□□ 1.44
PNKP-203ENST00000593946 KRT85P78386 507 aa24.03■■□□□ 1.44
PNKP-203ENST00000593946 BRAPQ7Z569 592 aa24.03■■□□□ 1.44
PNKP-203ENST00000593946 DCAF4Q8WV16 495 aa24.03■■□□□ 1.44
PNKP-203ENST00000593946 CPVLQ9H3G5 476 aa24.03■■□□□ 1.44
PNKP-203ENST00000593946 RIOX1Q9H6W3 641 aa24.03■■□□□ 1.44
PNKP-203ENST00000593946 ARHGEF10LQ9HCE6 1279 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms