RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 RASA3Q14644 834 aa15.35■□□□□ 0.05
VRK3-205ENST00000593919 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
VRK3-205ENST00000593919 NBPF11Q86T75 865 aa15.35■□□□□ 0.05
VRK3-205ENST00000593919 SLC26A6Q9BXS9 759 aa15.35■□□□□ 0.05
VRK3-205ENST00000593919 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.35■□□□□ 0.05
VRK3-205ENST00000593919 PGAP2Q9UHJ9 254 aa15.35■□□□□ 0.05
VRK3-205ENST00000593919 UBE2Q2LH0YL09 131 aa15.34■□□□□ 0.05
VRK3-205ENST00000593919 GDF11O95390 407 aa15.34■□□□□ 0.05
VRK3-205ENST00000593919 FMNL1O95466 1100 aaPredicted RBP15.34■□□□□ 0.05
VRK3-205ENST00000593919 TOP1P11387 765 aaKnown RBP15.34■□□□□ 0.05
VRK3-205ENST00000593919 ZNF445P59923 1031 aa15.34■□□□□ 0.05
VRK3-205ENST00000593919 SSRP1Q08945 709 aaKnown RBP15.34■□□□□ 0.05
VRK3-205ENST00000593919 AIFM3Q96NN9 605 aa15.34■□□□□ 0.05
VRK3-205ENST00000593919 MTMR7Q9Y216 660 aa15.34■□□□□ 0.05
VRK3-205ENST00000593919 STK36Q9NRP7 1315 aa15.34■□□□□ 0.05
VRK3-205ENST00000593919 ATAD5Q96QE3 1844 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 TTLL1O95922 423 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 MBD3O95983 291 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 FUT2Q10981 343 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 TMTC3Q6ZXV5 915 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 RASGRP2Q7LDG7 609 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 FERMT3Q86UX7 667 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 MAP3K14Q99558 947 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 TMEM63CQ9P1W3 806 aa15.33■□□□□ 0.05
VRK3-205ENST00000593919 KIF5BP33176 963 aa15.33■□□□□ 0.04
VRK3-205ENST00000593919 GUCY1B3Q02153 619 aa15.33■□□□□ 0.04
VRK3-205ENST00000593919 RRP1BQ14684 758 aaKnown RBP15.33■□□□□ 0.04
VRK3-205ENST00000593919 GRM4Q14833 912 aa15.33■□□□□ 0.04
VRK3-205ENST00000593919 TRIM22Q8IYM9 498 aa15.33■□□□□ 0.04
VRK3-205ENST00000593919 TEPSINQ96N21 525 aa15.33■□□□□ 0.04
VRK3-205ENST00000593919 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 ABCB5Q2M3G0 1257 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 TMEM179Q6ZVK1 233 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 MIGA2Q7L4E1 593 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 USP48Q86UV5 1035 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 LRRC47Q8N1G4 583 aaKnown RBP15.32■□□□□ 0.04
VRK3-205ENST00000593919 C8orf76Q96K31 380 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 ALG1Q9BT22 464 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 RNF26Q9BY78 433 aaPredicted RBP15.32■□□□□ 0.04
VRK3-205ENST00000593919 GJB4Q9NTQ9 266 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 CLIP2Q9UDT6 1046 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 MAD2L2Q9UI95 211 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 CNPY2Q9Y2B0 182 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 CNTNAP5Q8WYK1 1306 aa15.32■□□□□ 0.04
VRK3-205ENST00000593919 TBC1D12O60347 775 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 GADD45BO75293 160 aaPredicted RBP15.31■□□□□ 0.04
VRK3-205ENST00000593919 HIRAP54198 1017 aaPredicted RBP15.31■□□□□ 0.04
VRK3-205ENST00000593919 JAG1P78504 1218 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 SEPT2Q15019 361 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
VRK3-205ENST00000593919 OTUD7BQ6GQQ9 843 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 STAG2Q8N3U4 1231 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 SRBD1Q8N5C6 995 aaKnown RBP15.31■□□□□ 0.04
VRK3-205ENST00000593919 FBXO18Q8NFZ0 1043 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 DEFB129Q9H1M3 183 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 SOCS7O14512 581 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 GRIN3BO60391 1043 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 DEXIO95424 95 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 GH2P01242 217 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 LMOD1P29536 600 aaPredicted RBP15.31■□□□□ 0.04
VRK3-205ENST00000593919 ATP2B2Q01814 1243 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 KANSL2Q9H9L4 492 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 GGA3Q9NZ52 723 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 ATP6V1DQ9Y5K8 247 aa15.31■□□□□ 0.04
VRK3-205ENST00000593919 MAP3K10Q02779 954 aa15.3■□□□□ 0.04
VRK3-205ENST00000593919 ICA1Q05084 483 aa15.3■□□□□ 0.04
VRK3-205ENST00000593919 PPP4R3BQ5MIZ7 849 aa15.3■□□□□ 0.04
VRK3-205ENST00000593919 APOBEC3FQ8IUX4 373 aaKnown RBP15.3■□□□□ 0.04
VRK3-205ENST00000593919 hCG_1642624A0A1W2PR95 340 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 SYCE3A1L190 88 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 PALM3A6NDB9 673 aaPredicted RBP15.29■□□□□ 0.04
VRK3-205ENST00000593919 PDHBP11177 359 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 EEF2P13639 858 aaKnown RBP15.29■□□□□ 0.04
VRK3-205ENST00000593919 NASPP49321 788 aaPredicted RBP15.29■□□□□ 0.04
VRK3-205ENST00000593919 AKAP17AQ02040 695 aaKnown RBP15.29■□□□□ 0.04
VRK3-205ENST00000593919 RESTQ13127 1097 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 DPY19L2Q6NUT2 758 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 USP17L2Q6R6M4 530 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 WASF1Q92558 559 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 ADARB2Q9NS39 739 aaKnown RBP15.29■□□□□ 0.04
VRK3-205ENST00000593919 USP17L5A8MUK1 530 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 PRPF3O43395 683 aaKnown RBP15.29■□□□□ 0.04
VRK3-205ENST00000593919 PARP1P09874 1014 aaKnown RBP15.29■□□□□ 0.04
VRK3-205ENST00000593919 GOLGA8HP0CJ92 632 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 NYAP2Q9P242 653 aa15.29■□□□□ 0.04
VRK3-205ENST00000593919 V9GY48 417 aaPredicted RBP15.29■□□□□ 0.04
VRK3-205ENST00000593919 ZC3H4Q9UPT8 1303 aaKnown RBP15.28■□□□□ 0.04
VRK3-205ENST00000593919 FIBPO43427 364 aa15.28■□□□□ 0.04
VRK3-205ENST00000593919 SNHG28P0DPA3 235 aa15.28■□□□□ 0.04
VRK3-205ENST00000593919 GNAQP50148 359 aa15.28■□□□□ 0.04
VRK3-205ENST00000593919 DNM1Q05193 864 aaKnown RBP15.28■□□□□ 0.04
VRK3-205ENST00000593919 PKN1Q16512 942 aa15.28■□□□□ 0.04
VRK3-205ENST00000593919 FAM173BQ6P4H8 233 aa15.28■□□□□ 0.04
VRK3-205ENST00000593919 SIAH1Q8IUQ4 282 aa15.28■□□□□ 0.04
VRK3-205ENST00000593919 ZSCAN16Q9H4T2 348 aaPredicted RBP15.28■□□□□ 0.04
VRK3-205ENST00000593919 SCN4AP35499 1836 aa15.28■□□□□ 0.04
VRK3-205ENST00000593919 KLRF2D3W0D1 207 aa15.27■□□□□ 0.04
VRK3-205ENST00000593919 SLC35G1Q2M3R5 365 aa15.27■□□□□ 0.04
VRK3-205ENST00000593919 NBPF12Q5TAG4 269 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms