RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 MBD3O95983 291 aa17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 NOVP48745 357 aa17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 TMEM39BQ9GZU3 492 aa17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 GDPD2Q9HCC8 539 aa17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 SIPA1L1O43166 1804 aa17.25■□□□□ 0.35
GTF2F1-202ENST00000593678 CNTNAP1P78357 1384 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 KLHL40Q2TBA0 621 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 SAMD7Q7Z3H4 446 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 LRRC47Q8N1G4 583 aaKnown RBP17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 TMEM87AQ8NBN3 555 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 BRMS1Q9HCU9 246 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 MAD2L2Q9UI95 211 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 CNTNAP5Q8WYK1 1306 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 KLRF2D3W0D1 207 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 GDF11O95390 407 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 KIF23Q02241 960 aaPredicted RBP17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 ICA1Q05084 483 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 FUT2Q10981 343 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 FAM173BQ6P4H8 233 aa17.24■□□□□ 0.35
GTF2F1-202ENST00000593678 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
GTF2F1-202ENST00000593678 ASPRV1Q53RT3 343 aa17.23■□□□□ 0.35
GTF2F1-202ENST00000593678 GJB4Q9NTQ9 266 aa17.23■□□□□ 0.35
GTF2F1-202ENST00000593678 GPRC5DQ9NZD1 345 aa17.23■□□□□ 0.35
GTF2F1-202ENST00000593678 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
GTF2F1-202ENST00000593678 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
GTF2F1-202ENST00000593678 SBF1O95248 1867 aa17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 RAD21O60216 631 aa17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 TBC1D12O60347 775 aa17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 MMP1P03956 469 aa17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 SCG2P13521 617 aa17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 RASA3Q14644 834 aa17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 STAG2Q8N3U4 1231 aa17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 TFIP11Q9UBB9 837 aaKnown RBP17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 SEC63Q9UGP8 760 aaKnown RBP17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
GTF2F1-202ENST00000593678 hCG_1642624A0A1W2PR95 340 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 GH2P01242 217 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.353e-13■■■■□ 19.7
GTF2F1-202ENST00000593678 UBE2HP62256 183 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 SEPT2Q15019 361 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 GPR162Q16538 588 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 USP17L2Q6R6M4 530 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 CLEC10AQ8IUN9 316 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 PIBF1Q8WXW3 757 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 HOOK2Q96ED9 719 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 GREB1LQ9C091 1923 aaPredicted RBP17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 ELP1O95163 1332 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 MYH4Q9Y623 1939 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 USP17L5A8MUK1 530 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 UBE2Q2LH0YL09 131 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 EGFRP00533 1210 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 PDHBP11177 359 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 EEF2P13639 858 aaKnown RBP17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 PFKFB3Q16875 520 aaPredicted RBP17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 CCDC96Q2M329 555 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 GPATCH4Q5T3I0 446 aaKnown RBP17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 APOBEC3FQ8IUX4 373 aaKnown RBP17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 DIS3L2Q8IYB7 885 aaKnown RBP17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 VPS54Q9P1Q0 977 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.35
GTF2F1-202ENST00000593678 MYH15Q9Y2K3 1946 aa17.2■□□□□ 0.34
GTF2F1-202ENST00000593678 CEBPZQ03701 1054 aaKnown RBP17.2■□□□□ 0.34
GTF2F1-202ENST00000593678 PKN1Q16512 942 aa17.2■□□□□ 0.34
GTF2F1-202ENST00000593678 C9orf131Q5VYM1 1079 aa17.2■□□□□ 0.34
GTF2F1-202ENST00000593678 SYAP1Q96A49 352 aaPredicted RBP17.2■□□□□ 0.34
GTF2F1-202ENST00000593678 GZF1Q9H116 711 aaPredicted RBP17.2■□□□□ 0.34
GTF2F1-202ENST00000593678 FOXP1Q9H334 677 aaPredicted RBP17.2■□□□□ 0.34
GTF2F1-202ENST00000593678 ARHGEF10LQ9HCE6 1279 aa17.2■□□□□ 0.34
GTF2F1-202ENST00000593678 KRT2P35908 639 aa17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 MYSM1Q5VVJ2 828 aa17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 DPY19L2Q6NUT2 758 aa17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 MIGA2Q7L4E1 593 aa17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 NOSTRINQ8IVI9 506 aa17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 CCDC148Q8NFR7 591 aa17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 MKL1Q969V6 931 aa17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 DEFB129Q9H1M3 183 aa17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 FRMPD2Q68DX3 1309 aaPredicted RBP17.19■□□□□ 0.34
GTF2F1-202ENST00000593678 U2AF2P26368 475 aaKnown RBP eCLIP17.18■□□□□ 0.343e-6■■■□□ 19.1
GTF2F1-202ENST00000593678 CALML3P27482 149 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 NLRP5P59047 1200 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 DCAF4Q8WV16 495 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 LEO1Q8WVC0 666 aaPredicted RBP17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 SH3GLB2Q9NR46 395 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 BAZ2BQ9UIF8 2168 aaKnown RBP17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 KIF28PB7ZC32 967 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms