RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DYNLL2Q96FJ2 89 aa19.8■□□□□ 0.76
LIG1-205ENST00000593425 ARMT1Q9H993 441 aa19.8■□□□□ 0.76
LIG1-205ENST00000593425 IFIT2P09913 472 aaKnown RBP19.79■□□□□ 0.76
LIG1-205ENST00000593425 CYP2C19P33261 490 aa19.79■□□□□ 0.76
LIG1-205ENST00000593425 RPAP2Q8IXW5 612 aaPredicted RBP19.79■□□□□ 0.76
LIG1-205ENST00000593425 TRPV1Q8NER1 839 aa19.79■□□□□ 0.76
LIG1-205ENST00000593425 MOV10L1Q9BXT6 1211 aaKnown RBP19.79■□□□□ 0.76
LIG1-205ENST00000593425 TANGO6Q9C0B7 1094 aa19.79■□□□□ 0.76
LIG1-205ENST00000593425 DDX20Q9UHI6 824 aaKnown RBP19.79■□□□□ 0.76
LIG1-205ENST00000593425 SMIM22K7EJ46 135 aa19.78■□□□□ 0.76
LIG1-205ENST00000593425 PRKAB2O43741 272 aa19.78■□□□□ 0.76
LIG1-205ENST00000593425 IGHA2P01877 340 aa19.78■□□□□ 0.76
LIG1-205ENST00000593425 CHGBP05060 677 aa19.78■□□□□ 0.76
LIG1-205ENST00000593425 ATP2B2Q01814 1243 aa19.78■□□□□ 0.76
LIG1-205ENST00000593425 COG2Q14746 738 aa19.78■□□□□ 0.76
LIG1-205ENST00000593425 LRIT3Q3SXY7 679 aa19.78■□□□□ 0.76
LIG1-205ENST00000593425 UBE2OQ9C0C9 1292 aaKnown RBP19.78■□□□□ 0.76
LIG1-205ENST00000593425 COG6Q9Y2V7 657 aa19.78■□□□□ 0.76
LIG1-205ENST00000593425 COL11A1P12107 1806 aaPredicted RBP19.77■□□□□ 0.76
LIG1-205ENST00000593425 MBD4O95243 580 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 CYBAP13498 195 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 AKR1B1P15121 316 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 CNGA1P29973 690 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 ADD2P35612 726 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 TMEM179Q6ZVK1 233 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 SENP6Q9GZR1 1112 aaPredicted RBP19.77■□□□□ 0.76
LIG1-205ENST00000593425 BOLA2Q9H3K6 86 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 ZBTB40Q9NUA8 1239 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 PAG1Q9NWQ8 432 aa19.77■□□□□ 0.76
LIG1-205ENST00000593425 LTBP2Q14767 1821 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 CYP2D7A0A087X1C5 515 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 HMMRO75330 724 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 ADORA2AP29274 412 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 MDM2Q00987 491 aaPredicted RBP19.76■□□□□ 0.75
LIG1-205ENST00000593425 Q7L0L9 218 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 SIAH1Q8IUQ4 282 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 LPAR1Q92633 364 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 SPATC1LQ9H0A9 340 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 HOXC10Q9NYD6 342 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 SWAP70Q9UH65 585 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 DDX19BQ9UMR2 479 aa19.76■□□□□ 0.75
LIG1-205ENST00000593425 MSCO60682 206 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 RAB11FIP3O75154 756 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 MS4A1P11836 297 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 ERCC3P19447 782 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 ICA1Q05084 483 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 GPR153Q6NV75 609 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 DPP9Q86TI2 863 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 SPICE1Q8N0Z3 855 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 SHCBP1Q8NEM2 672 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 ATG4CQ96DT6 458 aa19.75■□□□□ 0.75
LIG1-205ENST00000593425 COBLO75128 1261 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 ATP5JP18859 108 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 DSG3P32926 999 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 ATN1P54259 1190 aaPredicted RBP19.74■□□□□ 0.75
LIG1-205ENST00000593425 OLFML2BQ68BL8 750 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 DEFB123Q8N688 67 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 SLC17A8Q8NDX2 589 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 ARHGEF10LQ9HCE6 1279 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 ATP8A2Q9NTI2 1148 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 TMX2Q9Y320 296 aa19.74■□□□□ 0.75
LIG1-205ENST00000593425 DNM1LO00429 736 aa19.73■□□□□ 0.75
LIG1-205ENST00000593425 STRNO43815 780 aa19.73■□□□□ 0.75
LIG1-205ENST00000593425 FLOT1O75955 427 aa19.73■□□□□ 0.75
LIG1-205ENST00000593425 PLS1Q14651 629 aa19.73■□□□□ 0.75
LIG1-205ENST00000593425 C12orf60Q5U649 245 aa19.73■□□□□ 0.75
LIG1-205ENST00000593425 ANO1Q5XXA6 986 aa19.73■□□□□ 0.75
LIG1-205ENST00000593425 DIEXFQ68CQ4 756 aaKnown RBP19.73■□□□□ 0.75
LIG1-205ENST00000593425 HAUS7Q99871 368 aa19.73■□□□□ 0.75
LIG1-205ENST00000593425 VCPKMTQ9H867 229 aa19.73■□□□□ 0.75
LIG1-205ENST00000593425 ZNFX1Q9P2E3 1918 aaKnown RBP19.72■□□□□ 0.75
LIG1-205ENST00000593425 CDK8P49336 464 aa19.72■□□□□ 0.75
LIG1-205ENST00000593425 GJC2Q5T442 439 aaPredicted RBP19.72■□□□□ 0.75
LIG1-205ENST00000593425 NCAPG2Q86XI2 1143 aa19.72■□□□□ 0.75
LIG1-205ENST00000593425 MB21D1Q8N884 522 aa19.72■□□□□ 0.75
LIG1-205ENST00000593425 GREB1LQ9C091 1923 aaPredicted RBP19.72■□□□□ 0.75
LIG1-205ENST00000593425 USP17L12C9JPN9 530 aa19.71■□□□□ 0.75
LIG1-205ENST00000593425 USP17L21D6R901 530 aa19.71■□□□□ 0.75
LIG1-205ENST00000593425 WDR46O15213 610 aaKnown RBP19.71■□□□□ 0.75
LIG1-205ENST00000593425 SAMD1Q6SPF0 538 aaPredicted RBP19.71■□□□□ 0.75
LIG1-205ENST00000593425 C16orf86Q6ZW13 317 aa19.71■□□□□ 0.75
LIG1-205ENST00000593425 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.71■□□□□ 0.753e-7■■□□□ 13.9
LIG1-205ENST00000593425 MROH8Q9H579 483 aa19.71■□□□□ 0.75
LIG1-205ENST00000593425 SH2D4AQ9H788 454 aa19.71■□□□□ 0.75
LIG1-205ENST00000593425 PLXNA1Q9UIW2 1896 aa19.71■□□□□ 0.75
LIG1-205ENST00000593425 COL6A3P12111 3177 aa19.7■□□□□ 0.74
LIG1-205ENST00000593425 SEPT4O43236 478 aa19.7■□□□□ 0.74
LIG1-205ENST00000593425 RTP1P59025 263 aa19.7■□□□□ 0.74
LIG1-205ENST00000593425 TMEM132BQ14DG7 1078 aa19.7■□□□□ 0.74
LIG1-205ENST00000593425 UBE3CQ15386 1083 aa19.7■□□□□ 0.74
LIG1-205ENST00000593425 PRAMEF19Q5SWL8 479 aa19.7■□□□□ 0.74
LIG1-205ENST00000593425 CCDC17Q96LX7 622 aa19.7■□□□□ 0.74
LIG1-205ENST00000593425 MTMR10Q9NXD2 777 aa19.7■□□□□ 0.74
LIG1-205ENST00000593425 EEF2P13639 858 aaKnown RBP19.69■□□□□ 0.74
LIG1-205ENST00000593425 MAML3Q96JK9 1138 aa19.69■□□□□ 0.74
LIG1-205ENST00000593425 PUS7LQ9H0K6 701 aaKnown RBP19.69■□□□□ 0.74
LIG1-205ENST00000593425 FBXO28Q9NVF7 368 aa19.69■□□□□ 0.74
LIG1-205ENST00000593425 SLC4A4Q9Y6R1 1079 aa19.69■□□□□ 0.74
LIG1-205ENST00000593425 CTR9Q6PD62 1173 aa19.68■□□□□ 0.74
LIG1-205ENST00000593425 AMOTL1Q8IY63 956 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms