RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 EHD4Q9H223 541 aa13.74□□□□□ -0.21
NPC1-214ENST00000593280 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
NPC1-214ENST00000593280 PCDHAC2Q9Y5I4 1007 aa13.74□□□□□ -0.21
NPC1-214ENST00000593280 BRCA1P38398 1863 aaKnown RBP13.73□□□□□ -0.21
NPC1-214ENST00000593280 PALM3A6NDB9 673 aaPredicted RBP13.73□□□□□ -0.21
NPC1-214ENST00000593280 AKR1B1P15121 316 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 CMA1P23946 247 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 POLD1P28340 1107 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 MARCKSP29966 332 aaPredicted RBP13.73□□□□□ -0.21
NPC1-214ENST00000593280 SHMT1P34896 483 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 TOB1P50616 345 aaPredicted RBP13.73□□□□□ -0.21
NPC1-214ENST00000593280 TYRO3Q06418 890 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 UVSSAQ2YD98 709 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 FMR1NBQ8N0W7 255 aaPredicted RBP13.73□□□□□ -0.21
NPC1-214ENST00000593280 LARGE2Q8N3Y3 721 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 PIBF1Q8WXW3 757 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 PPP1R9BQ96SB3 815 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 IDI2Q9BXS1 227 aa13.73□□□□□ -0.21
NPC1-214ENST00000593280 DHX36Q9H2U1 1008 aaKnown RBP13.73□□□□□ -0.21
NPC1-214ENST00000593280 MYH4Q9Y623 1939 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 COL4A5P29400 1685 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 IGKV6D-41A0A0C4DH26 115 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 A0A1B0GVL5 298 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 CUTAO60888 179 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
NPC1-214ENST00000593280 PARP1P09874 1014 aaKnown RBP13.72□□□□□ -0.21
NPC1-214ENST00000593280 NDUFA8P51970 172 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 CACNB3P54284 484 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 NLRP5P59047 1200 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 TGFB2P61812 414 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 SASS6Q6UVJ0 657 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 VPS33BQ9H267 617 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 SH3GLB2Q9NR46 395 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
NPC1-214ENST00000593280 ZNF277Q9NRM2 450 aaPredicted RBP13.72□□□□□ -0.21
NPC1-214ENST00000593280 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 NOL7Q9UMY1 257 aaKnown RBP13.72□□□□□ -0.21
NPC1-214ENST00000593280 CEP131Q9UPN4 1083 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 CALML3P27482 149 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 TCP10Q12799 353 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 CFAP100Q494V2 611 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
NPC1-214ENST00000593280 ZFPM1Q8IX07 1006 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 SPZ1Q9BXG8 430 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 MTFR1LQ9H019 292 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 CABP5Q9NP86 173 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 PIM2Q9P1W9 311 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 FAM198AQ9UFP1 575 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 MRVI1Q9Y6F6 885 aa13.72□□□□□ -0.21
NPC1-214ENST00000593280 KLRF2D3W0D1 207 aa13.71□□□□□ -0.22
NPC1-214ENST00000593280 PFKFB1P16118 471 aa13.71□□□□□ -0.22
NPC1-214ENST00000593280 NPY5RQ15761 445 aa13.71□□□□□ -0.22
NPC1-214ENST00000593280 PPP4R3BQ5MIZ7 849 aa13.71□□□□□ -0.22
NPC1-214ENST00000593280 ZSCAN29Q8IWY8 852 aaPredicted RBP13.71□□□□□ -0.22
NPC1-214ENST00000593280 KRI1Q8N9T8 703 aaKnown RBP13.71□□□□□ -0.22
NPC1-214ENST00000593280 TNFRSF25Q93038 417 aa13.71□□□□□ -0.22
NPC1-214ENST00000593280 TRIM34Q9BYJ4 488 aa13.71□□□□□ -0.22
NPC1-214ENST00000593280 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.22
NPC1-214ENST00000593280 COL2A1P02458 1487 aaPredicted RBP13.71□□□□□ -0.22
NPC1-214ENST00000593280 FER1L6Q2WGJ9 1857 aa13.71□□□□□ -0.22
NPC1-214ENST00000593280 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 MPHOSPH10O00566 681 aaKnown RBP13.7□□□□□ -0.22
NPC1-214ENST00000593280 RAD17O75943 681 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 TTLL1O95922 423 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 GOLGA8HP0CJ92 632 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 RESP18Q5W5W9 173 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 NIM1KQ8IY84 436 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
NPC1-214ENST00000593280 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 GPKOWQ92917 476 aaPredicted RBP eCLIP13.7□□□□□ -0.22
NPC1-214ENST00000593280 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
NPC1-214ENST00000593280 CCDC17Q96LX7 622 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 TDRD3Q9H7E2 651 aaKnown RBP13.7□□□□□ -0.22
NPC1-214ENST00000593280 PI4KBQ9UBF8 816 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 HDAC9Q9UKV0 1011 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 PCDHB6Q9Y5E3 794 aa13.7□□□□□ -0.22
NPC1-214ENST00000593280 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
NPC1-214ENST00000593280 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 PSDA5PKW4 1024 aaPredicted RBP13.69□□□□□ -0.22
NPC1-214ENST00000593280 FAM205CA6NFA0 338 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 DDTLA6NHG4 134 aaPredicted RBP13.69□□□□□ -0.22
NPC1-214ENST00000593280 USP17L5A8MUK1 530 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 PSMD14O00487 310 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 CYTH3O43739 400 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 ENTPD3O75355 529 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 BMP15O95972 392 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 VIL1P09327 827 aaKnown RBP13.69□□□□□ -0.22
NPC1-214ENST00000593280 ATP2B1P20020 1258 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 SMARCA1P28370 1054 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 ANO6Q4KMQ2 910 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 ASPRV1Q53RT3 343 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 DALRD3Q5D0E6 543 aaKnown RBP13.69□□□□□ -0.22
NPC1-214ENST00000593280 USP17L2Q6R6M4 530 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 SHC4Q6S5L8 630 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
NPC1-214ENST00000593280 FAM200AQ8TCP9 573 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 PDLIM2Q96JY6 352 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms