RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SLFNL1Q499Z3 407 aa21.17■□□□□ 0.98
RETREG3-212ENST00000593251 HSP90AB4PQ58FF6 505 aa21.17■□□□□ 0.98
RETREG3-212ENST00000593251 MIER1Q8N108 512 aa21.17■□□□□ 0.98
RETREG3-212ENST00000593251 TRPV1Q8NER1 839 aa21.17■□□□□ 0.98
RETREG3-212ENST00000593251 TANGO6Q9C0B7 1094 aa21.17■□□□□ 0.98
RETREG3-212ENST00000593251 SENP6Q9GZR1 1112 aaPredicted RBP21.17■□□□□ 0.98
RETREG3-212ENST00000593251 DDX20Q9UHI6 824 aaKnown RBP21.17■□□□□ 0.98
RETREG3-212ENST00000593251 TCRBV5S4A2TA0A5A2 114 aa21.16■□□□□ 0.98
RETREG3-212ENST00000593251 HOXC6P09630 235 aa21.16■□□□□ 0.98
RETREG3-212ENST00000593251 KIAA1755Q5JYT7 1200 aa21.16■□□□□ 0.98
RETREG3-212ENST00000593251 CLEC10AQ8IUN9 316 aa21.16■□□□□ 0.98
RETREG3-212ENST00000593251 CLASRPQ8N2M8 674 aaKnown RBP21.16■□□□□ 0.98
RETREG3-212ENST00000593251 DYNLL2Q96FJ2 89 aa21.16■□□□□ 0.98
RETREG3-212ENST00000593251 MOV10L1Q9BXT6 1211 aaKnown RBP21.16■□□□□ 0.98
RETREG3-212ENST00000593251 ARMT1Q9H993 441 aa21.16■□□□□ 0.98
RETREG3-212ENST00000593251 DCP1AQ9NPI6 582 aaPredicted RBP21.16■□□□□ 0.98
RETREG3-212ENST00000593251 ATN1P54259 1190 aaPredicted RBP21.15■□□□□ 0.98
RETREG3-212ENST00000593251 COG2Q14746 738 aa21.15■□□□□ 0.98
RETREG3-212ENST00000593251 LTBP2Q14767 1821 aa21.15■□□□□ 0.98
RETREG3-212ENST00000593251 DLL1O00548 723 aa21.14■□□□□ 0.97
RETREG3-212ENST00000593251 PRKAB2O43741 272 aa21.14■□□□□ 0.97
RETREG3-212ENST00000593251 IFIT2P09913 472 aaKnown RBP21.14■□□□□ 0.97
RETREG3-212ENST00000593251 GPR153Q6NV75 609 aa21.14■□□□□ 0.97
RETREG3-212ENST00000593251 DPP9Q86TI2 863 aa21.14■□□□□ 0.97
RETREG3-212ENST00000593251 LPAR1Q92633 364 aa21.14■□□□□ 0.97
RETREG3-212ENST00000593251 KIF1BPQ96EK5 621 aa21.14■□□□□ 0.97
RETREG3-212ENST00000593251 LAMA2P24043 3122 aaKnown RBP21.13■□□□□ 0.97
RETREG3-212ENST00000593251 SMIM22K7EJ46 135 aa21.13■□□□□ 0.97
RETREG3-212ENST00000593251 CYBAP13498 195 aa21.13■□□□□ 0.97
RETREG3-212ENST00000593251 ADORA2AP29274 412 aa21.13■□□□□ 0.97
RETREG3-212ENST00000593251 ANO1Q5XXA6 986 aa21.13■□□□□ 0.97
RETREG3-212ENST00000593251 SAMD1Q6SPF0 538 aaPredicted RBP21.13■□□□□ 0.97
RETREG3-212ENST00000593251 SIRT2Q8IXJ6 389 aa21.13■□□□□ 0.97
RETREG3-212ENST00000593251 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.13■□□□□ 0.97
RETREG3-212ENST00000593251 SPATC1LQ9H0A9 340 aa21.13■□□□□ 0.97
RETREG3-212ENST00000593251 HOXC10Q9NYD6 342 aa21.13■□□□□ 0.97
RETREG3-212ENST00000593251 PLXNA1Q9UIW2 1896 aa21.13■□□□□ 0.97
RETREG3-212ENST00000593251 MSCO60682 206 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 MBD4O95243 580 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 IGHA2P01877 340 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 AKR1B1P15121 316 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 ERCC3P19447 782 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 PLS1Q14651 629 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 GJC2Q5T442 439 aaPredicted RBP21.12■□□□□ 0.97
RETREG3-212ENST00000593251 TMEM179Q6ZVK1 233 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 SPICE1Q8N0Z3 855 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 BOLA2Q9H3K6 86 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 SMCHD1A6NHR9 2005 aa21.12■□□□□ 0.97
RETREG3-212ENST00000593251 CYP2D7A0A087X1C5 515 aa21.11■□□□□ 0.97
RETREG3-212ENST00000593251 COBLO75128 1261 aa21.11■□□□□ 0.97
RETREG3-212ENST00000593251 CHGBP05060 677 aa21.11■□□□□ 0.97
RETREG3-212ENST00000593251 SIAH1Q8IUQ4 282 aa21.11■□□□□ 0.97
RETREG3-212ENST00000593251 ATG4CQ96DT6 458 aa21.11■□□□□ 0.97
RETREG3-212ENST00000593251 PAG1Q9NWQ8 432 aa21.11■□□□□ 0.97
RETREG3-212ENST00000593251 MTMR10Q9NXD2 777 aa21.11■□□□□ 0.97
RETREG3-212ENST00000593251 COG6Q9Y2V7 657 aa21.11■□□□□ 0.97
RETREG3-212ENST00000593251 A0A0C4DFX4 3053 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 DNM1LO00429 736 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 STRNO43815 780 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 FLOT1O75955 427 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 DSG3P32926 999 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 RTP1P59025 263 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 ICA1Q05084 483 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 NCAPG2Q86XI2 1143 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 RPAP2Q8IXW5 612 aaPredicted RBP21.1■□□□□ 0.97
RETREG3-212ENST00000593251 SHCBP1Q8NEM2 672 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 SWAP70Q9UH65 585 aa21.1■□□□□ 0.97
RETREG3-212ENST00000593251 ZBED9Q6R2W3 1325 aa21.09■□□□□ 0.97
RETREG3-212ENST00000593251 HMMRO75330 724 aa21.09■□□□□ 0.97
RETREG3-212ENST00000593251 MYCNP04198 464 aaPredicted RBP21.09■□□□□ 0.97
RETREG3-212ENST00000593251 ADD2P35612 726 aa21.09■□□□□ 0.97
RETREG3-212ENST00000593251 PRAMEF19Q5SWL8 479 aa21.09■□□□□ 0.97
RETREG3-212ENST00000593251 OLFML2BQ68BL8 750 aa21.09■□□□□ 0.97
RETREG3-212ENST00000593251 ARHGEF10LQ9HCE6 1279 aa21.09■□□□□ 0.97
RETREG3-212ENST00000593251 LBHD1Q9BQE6 289 aaPredicted RBP21.08■□□□□ 0.97
RETREG3-212ENST00000593251 VCPKMTQ9H867 229 aa21.08■□□□□ 0.97
RETREG3-212ENST00000593251 ATP8A2Q9NTI2 1148 aa21.08■□□□□ 0.97
RETREG3-212ENST00000593251 ZBTB40Q9NUA8 1239 aa21.08■□□□□ 0.97
RETREG3-212ENST00000593251 ATP11BQ9Y2G3 1177 aa21.08■□□□□ 0.97
RETREG3-212ENST00000593251 TMX2Q9Y320 296 aa21.08■□□□□ 0.97
RETREG3-212ENST00000593251 MS4A1P11836 297 aa21.07■□□□□ 0.96
RETREG3-212ENST00000593251 CDK8P49336 464 aa21.07■□□□□ 0.96
RETREG3-212ENST00000593251 MB21D1Q8N884 522 aa21.07■□□□□ 0.96
RETREG3-212ENST00000593251 MROH8Q9H579 483 aa21.07■□□□□ 0.96
RETREG3-212ENST00000593251 DDX19BQ9UMR2 479 aa21.07■□□□□ 0.96
RETREG3-212ENST00000593251 STXBP5LQ9Y2K9 1186 aa21.07■□□□□ 0.96
RETREG3-212ENST00000593251 USP17L12C9JPN9 530 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 KBTBD13C9JR72 458 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 USP17L21D6R901 530 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 SEPT4O43236 478 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 RAB11FIP3O75154 756 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 ATP5JP18859 108 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 C12orf60Q5U649 245 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 ARRDC4Q8NCT1 418 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 SH2D4AQ9H788 454 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 PRKAG2Q9UGJ0 569 aa21.06■□□□□ 0.96
RETREG3-212ENST00000593251 WDR46O15213 610 aaKnown RBP21.05■□□□□ 0.96
RETREG3-212ENST00000593251 TMEM132BQ14DG7 1078 aa21.05■□□□□ 0.96
RETREG3-212ENST00000593251 SLC39A5Q6ZMH5 540 aa21.05■□□□□ 0.96
RETREG3-212ENST00000593251 MAML3Q96JK9 1138 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms