RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.74■□□□□ 0.11
VMP1-217ENST00000593168 NAP1L2Q9ULW6 460 aaPredicted RBP15.74■□□□□ 0.11
VMP1-217ENST00000593168 CLRN2A0PK11 232 aa15.73■□□□□ 0.11
VMP1-217ENST00000593168 POTEFA5A3E0 1075 aa15.73■□□□□ 0.11
VMP1-217ENST00000593168 PPP2R5BQ15173 497 aa15.73■□□□□ 0.11
VMP1-217ENST00000593168 IFIT1BQ5T764 474 aaKnown RBP15.73■□□□□ 0.11
VMP1-217ENST00000593168 OTOP1Q7RTM1 612 aa15.73■□□□□ 0.11
VMP1-217ENST00000593168 IFNL1Q8IU54 200 aa15.73■□□□□ 0.11
VMP1-217ENST00000593168 ZSCAN29Q8IWY8 852 aaPredicted RBP15.73■□□□□ 0.11
VMP1-217ENST00000593168 SMARCC2Q8TAQ2 1214 aa15.73■□□□□ 0.11
VMP1-217ENST00000593168 TRIM17Q9Y577 477 aa15.73■□□□□ 0.11
VMP1-217ENST00000593168 NID2Q14112 1375 aa15.73■□□□□ 0.11
VMP1-217ENST00000593168 MANSC4A6NHS7 340 aaPredicted RBP15.72■□□□□ 0.11
VMP1-217ENST00000593168 TCP10L2B9ZVM9 353 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
VMP1-217ENST00000593168 ALDH1A1P00352 501 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 GJB2P29033 226 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 SHMT1P34896 483 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 METAP2P50579 478 aaKnown RBP eCLIP15.72■□□□□ 0.11
VMP1-217ENST00000593168 HMGN5P82970 282 aaKnown RBP15.72■□□□□ 0.11
VMP1-217ENST00000593168 ZNF654Q8IZM8 581 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 CRACR2BQ8N4Y2 399 aaPredicted RBP15.72■□□□□ 0.11
VMP1-217ENST00000593168 NSUN7Q8NE18 718 aaKnown RBP15.72■□□□□ 0.11
VMP1-217ENST00000593168 CLMNQ96JQ2 1002 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 CCDC17Q96LX7 622 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 DEFB129Q9H1M3 183 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 IL17RBQ9NRM6 502 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 PLIN4Q96Q06 1357 aa15.72■□□□□ 0.11
VMP1-217ENST00000593168 MKI67P46013 3256 aaKnown RBP15.72■□□□□ 0.11
VMP1-217ENST00000593168 OTOFQ9HC10 1997 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 CENPFP49454 3210 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 CTDNEP1O95476 244 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 CALM1P0DP23 149 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 CALM2P0DP24 149 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 CALM3P0DP25 149 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 NOVP48745 357 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 TNNI2P48788 182 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 RAB3GAP1Q15042 981 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 RCSD1Q6JBY9 416 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 TATDN1Q6P1N9 297 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 SLC10A4Q96EP9 437 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
VMP1-217ENST00000593168 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
VMP1-217ENST00000593168 GOLGA8AA7E2F4 631 aa15.7■□□□□ 0.1
VMP1-217ENST00000593168 NMT2O60551 498 aa15.7■□□□□ 0.1
VMP1-217ENST00000593168 DDAH1O94760 285 aa15.7■□□□□ 0.1
VMP1-217ENST00000593168 ZBTB48P10074 688 aaPredicted RBP15.7■□□□□ 0.1
VMP1-217ENST00000593168 PDCP20941 246 aa15.7■□□□□ 0.1
VMP1-217ENST00000593168 INHBEP58166 350 aa15.7■□□□□ 0.1
VMP1-217ENST00000593168 TNFAIP1Q13829 316 aa15.7■□□□□ 0.1
VMP1-217ENST00000593168 HABP4Q5JVS0 413 aaKnown RBP15.7■□□□□ 0.1
VMP1-217ENST00000593168 CPLX2Q6PUV4 134 aaKnown RBP15.7■□□□□ 0.1
VMP1-217ENST00000593168 MICU3Q86XE3 530 aa15.7■□□□□ 0.1
VMP1-217ENST00000593168 TRIM34Q9BYJ4 488 aa15.7■□□□□ 0.1
VMP1-217ENST00000593168 NCOA5Q9HCD5 579 aaKnown RBP15.7■□□□□ 0.1
VMP1-217ENST00000593168 SIPA1L1O43166 1804 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 IGKV6D-41A0A0C4DH26 115 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 CCDC196A0A1B0GTZ2 297 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 CPLX1O14810 134 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 TBC1D12O60347 775 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 JAK2O60674 1132 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 CDKL5O76039 1030 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 AKR1B1P15121 316 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 SYT1P21579 422 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 TROAPQ12815 778 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 RTN1Q16799 776 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 PPP4R3BQ5MIZ7 849 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 FANCBQ8NB91 859 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 CD99L2Q8TCZ2 262 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 MAP3K14Q99558 947 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.69■□□□□ 0.1
VMP1-217ENST00000593168 DNAJC18Q9H819 358 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 FAM217BQ9NTX9 383 aaPredicted RBP15.69■□□□□ 0.1
VMP1-217ENST00000593168 PTPN22Q9Y2R2 807 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 KIF3AQ9Y496 699 aa15.69■□□□□ 0.1
VMP1-217ENST00000593168 BRCA2P51587 3418 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 PTPDC1A2A3K4 754 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 BRD1O95696 1058 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 CDC27P30260 824 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 ADD1P35611 737 aaKnown RBP15.68■□□□□ 0.1
VMP1-217ENST00000593168 GJA5P36382 358 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 CAP1Q01518 475 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 RAB11FIP4Q86YS3 637 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 MYL10Q9BUA6 226 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 KAT14Q9H8E8 782 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 ZDHHC9Q9Y397 364 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 MYH8P13535 1937 aa15.68■□□□□ 0.1
VMP1-217ENST00000593168 STX6O43752 255 aa15.67■□□□□ 0.1
VMP1-217ENST00000593168 PPP1R12BO60237 982 aaPredicted RBP15.67■□□□□ 0.1
VMP1-217ENST00000593168 TOP1P11387 765 aaKnown RBP15.67■□□□□ 0.1
VMP1-217ENST00000593168 RXRAP19793 462 aa15.67■□□□□ 0.1
VMP1-217ENST00000593168 MAP3K10Q02779 954 aa15.67■□□□□ 0.1
VMP1-217ENST00000593168 CRHR2Q13324 411 aa15.67■□□□□ 0.1
VMP1-217ENST00000593168 PKP1Q13835 747 aa15.67■□□□□ 0.1
VMP1-217ENST00000593168 RASA3Q14644 834 aa15.67■□□□□ 0.1
VMP1-217ENST00000593168 NTRK3Q16288 839 aa15.67■□□□□ 0.1
VMP1-217ENST00000593168 CERKLQ49MI3 558 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms