RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 VCPKMTQ9H867 229 aa17.81■□□□□ 0.44
SF3A2-207ENST00000592839 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
SF3A2-207ENST00000592839 ADAMTS5Q9UNA0 930 aa17.81■□□□□ 0.44
SF3A2-207ENST00000592839 IGKV6D-41A0A0C4DH26 115 aa17.8■□□□□ 0.44
SF3A2-207ENST00000592839 PATL2C9JE40 543 aaKnown RBP17.8■□□□□ 0.44
SF3A2-207ENST00000592839 WDR46O15213 610 aaKnown RBP17.8■□□□□ 0.44
SF3A2-207ENST00000592839 FOXP2O15409 715 aa17.8■□□□□ 0.44
SF3A2-207ENST00000592839 INHAP05111 366 aa17.8■□□□□ 0.44
SF3A2-207ENST00000592839 HOXC6P09630 235 aa17.8■□□□□ 0.44
SF3A2-207ENST00000592839 RASA1P20936 1047 aa17.8■□□□□ 0.44
SF3A2-207ENST00000592839 HABP4Q5JVS0 413 aaKnown RBP17.8■□□□□ 0.44
SF3A2-207ENST00000592839 TRMT44Q8IYL2 757 aaKnown RBP17.8■□□□□ 0.44
SF3A2-207ENST00000592839 MB21D1Q8N884 522 aa17.8■□□□□ 0.44
SF3A2-207ENST00000592839 EVI5LQ96CN4 794 aa17.8■□□□□ 0.44
SF3A2-207ENST00000592839 PORCNQ9H237 461 aa17.8■□□□□ 0.44
SF3A2-207ENST00000592839 RPAP3Q9H6T3 665 aaPredicted RBP17.8■□□□□ 0.44
SF3A2-207ENST00000592839 ZMYM6O95789 1325 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 MYCP01106 439 aaPredicted RBP17.79■□□□□ 0.44
SF3A2-207ENST00000592839 CCNA1P78396 465 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 COG2Q14746 738 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 ANKRD45Q5TZF3 282 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 GPR142Q7Z601 462 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 IFNL3Q8IZI9 196 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 SHCBP1Q8NEM2 672 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 NUDT12Q9BQG2 462 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 HOXC10Q9NYD6 342 aa17.79■□□□□ 0.44
SF3A2-207ENST00000592839 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
SF3A2-207ENST00000592839 SGPL1O95470 568 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 ELNP15502 786 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 KIAA1755Q5JYT7 1200 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
SF3A2-207ENST00000592839 FSD1Q9BTV5 496 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 RNF208Q9H0X6 261 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 BCL11AQ9H165 835 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 UNC93B1Q9H1C4 597 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 ZNF287Q9HBT7 754 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 BTBD7Q9P203 1132 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 NYAP2Q9P242 653 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 MYH4Q9Y623 1939 aa17.78■□□□□ 0.44
SF3A2-207ENST00000592839 DSG3P32926 999 aa17.77■□□□□ 0.44
SF3A2-207ENST00000592839 GRB14Q14449 540 aa17.77■□□□□ 0.44
SF3A2-207ENST00000592839 ZYXQ15942 572 aaKnown RBP17.77■□□□□ 0.44
SF3A2-207ENST00000592839 PLEKHH3Q7Z736 793 aa17.77■□□□□ 0.44
SF3A2-207ENST00000592839 TRIB2Q92519 343 aa17.77■□□□□ 0.44
SF3A2-207ENST00000592839 MKL1Q969V6 931 aa17.77■□□□□ 0.44
SF3A2-207ENST00000592839 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
SF3A2-207ENST00000592839 APBA2Q99767 749 aa17.77■□□□□ 0.44
SF3A2-207ENST00000592839 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
SF3A2-207ENST00000592839 RPTORQ8N122 1335 aa17.76■□□□□ 0.43
SF3A2-207ENST00000592839 ECM2O94769 699 aaPredicted RBP17.76■□□□□ 0.43
SF3A2-207ENST00000592839 EEF2P13639 858 aaKnown RBP17.76■□□□□ 0.43
SF3A2-207ENST00000592839 NUCB1Q02818 461 aa17.76■□□□□ 0.43
SF3A2-207ENST00000592839 ALX1Q15699 326 aa17.76■□□□□ 0.43
SF3A2-207ENST00000592839 CLEC10AQ8IUN9 316 aa17.76■□□□□ 0.43
SF3A2-207ENST00000592839 ANKLE1Q8NAG6 615 aa17.76■□□□□ 0.43
SF3A2-207ENST00000592839 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
SF3A2-207ENST00000592839 NACAP1Q9BZK3 213 aa17.76■□□□□ 0.43
SF3A2-207ENST00000592839 HELLSQ9NRZ9 838 aa17.76■□□□□ 0.43
SF3A2-207ENST00000592839 ANAPC4Q9UJX5 808 aa17.76■□□□□ 0.43
SF3A2-207ENST00000592839 COL11A1P12107 1806 aaPredicted RBP17.76■□□□□ 0.43
SF3A2-207ENST00000592839 FRMPD3Q5JV73 1810 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 SLC15A5A6NIM6 579 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 PEX10O60683 326 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 FGRP09769 529 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 PTPREP23469 700 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 RGS2P41220 211 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 NOVP48745 357 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 MAP2K5Q13163 448 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 ABRAQ8N0Z2 381 aa17.75■□□□□ 0.43
SF3A2-207ENST00000592839 ZBTB47Q9UFB7 747 aaPredicted RBP17.75■□□□□ 0.43
SF3A2-207ENST00000592839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
SF3A2-207ENST00000592839 STRNO43815 780 aa17.74■□□□□ 0.43
SF3A2-207ENST00000592839 TDO2P48775 406 aa17.74■□□□□ 0.43
SF3A2-207ENST00000592839 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
SF3A2-207ENST00000592839 PAGR1Q9BTK6 254 aa17.74■□□□□ 0.43
SF3A2-207ENST00000592839 SPATC1LQ9H0A9 340 aa17.74■□□□□ 0.43
SF3A2-207ENST00000592839 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.74■□□□□ 0.433e-12■■■■□ 24.2
SF3A2-207ENST00000592839 GOPCQ9HD26 462 aa17.74■□□□□ 0.43
SF3A2-207ENST00000592839 IGHDP01880 384 aa17.73■□□□□ 0.43
SF3A2-207ENST00000592839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.73■□□□□ 0.43
SF3A2-207ENST00000592839 REPS2Q8NFH8 660 aa17.73■□□□□ 0.43
SF3A2-207ENST00000592839 NEDD1Q8NHV4 660 aa17.73■□□□□ 0.43
SF3A2-207ENST00000592839 EXOC6Q8TAG9 804 aa17.73■□□□□ 0.43
SF3A2-207ENST00000592839 MOV10L1Q9BXT6 1211 aaKnown RBP17.73■□□□□ 0.43
SF3A2-207ENST00000592839 HMX1Q9NP08 348 aaPredicted RBP17.73■□□□□ 0.43
SF3A2-207ENST00000592839 BIN2Q9UBW5 565 aaPredicted RBP17.73■□□□□ 0.43
SF3A2-207ENST00000592839 TRIOBPQ9H2D6 2365 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 ATP2A1O14983 1001 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 PPARAQ07869 468 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 PLEKHM2Q8IWE5 1019 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 GMCL1P1Q8NEA9 526 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 TANGO6Q9C0B7 1094 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 NAPBQ9H115 298 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 MROH8Q9H579 483 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 MKNK2Q9HBH9 465 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 MTMR4Q9NYA4 1195 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 OGDHLQ9ULD0 1010 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 PPP1R9AQ9ULJ8 1098 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 LAMA4Q16363 1823 aa17.72■□□□□ 0.43
SF3A2-207ENST00000592839 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms