RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 BRCA2P51587 3418 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 CYP21A2P08686 494 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 USP14P54578 494 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 HERVK_113P62684 666 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 RCSD1Q6JBY9 416 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 OTOP1Q7RTM1 612 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 MCOLN1Q9GZU1 580 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 RPAP3Q9H6T3 665 aaPredicted RBP14.06□□□□□ -0.16
H3F3B-212ENST00000592643 CLIP2Q9UDT6 1046 aa14.06□□□□□ -0.16
H3F3B-212ENST00000592643 ZNF213O14771 459 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 RANBP6O60518 1105 aaKnown RBP14.05□□□□□ -0.16
H3F3B-212ENST00000592643 NDUFB10O96000 172 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 SLC3A2P08195 630 aaKnown RBP14.05□□□□□ -0.16
H3F3B-212ENST00000592643 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 ATP2B2Q01814 1243 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 Q3C1V9 767 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 CTU1Q7Z7A3 348 aaKnown RBP14.05□□□□□ -0.16
H3F3B-212ENST00000592643 LRRC47Q8N1G4 583 aaKnown RBP14.05□□□□□ -0.16
H3F3B-212ENST00000592643 ANKRD13CQ8N6S4 541 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 RUFY2Q8WXA3 655 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 NUP88Q99567 741 aaPredicted RBP14.05□□□□□ -0.16
H3F3B-212ENST00000592643 ZNF287Q9HBT7 754 aa14.05□□□□□ -0.16
H3F3B-212ENST00000592643 RLFQ13129 1914 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 SPDYE16A6NNV3 312 aaPredicted RBP14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L15C9J2P7 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L13C9JLJ4 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L11C9JVI0 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L18D6R9N7 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L22D6RA61 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L17D6RBQ6 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L19D6RCP7 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L20D6RJB6 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 F5H6K3 240 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
H3F3B-212ENST00000592643 KLRC3Q07444 240 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 USP17L24Q0WX57 530 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 RRP12Q5JTH9 1297 aaKnown RBP14.04□□□□□ -0.16
H3F3B-212ENST00000592643 LPAR1Q92633 364 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 ARHGEF10LQ9HCE6 1279 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 FBXO28Q9NVF7 368 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 BTBD7Q9P203 1132 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 MORF4L1Q9UBU8 362 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 RBM8AQ9Y5S9 174 aaKnown RBP14.04□□□□□ -0.16
H3F3B-212ENST00000592643 LAMA4Q16363 1823 aa14.04□□□□□ -0.16
H3F3B-212ENST00000592643 MYH8P13535 1937 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 TSPY2A6NKD2 308 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 B4E1Z4 1266 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 CDC45O75419 566 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 TTLL1O95922 423 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 OSBPP22059 807 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 NECTIN1Q15223 517 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 FAM83BQ5T0W9 1011 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 LBX2Q6XYB7 198 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 SMCR8Q8TEV9 937 aaPredicted RBP14.03□□□□□ -0.16
H3F3B-212ENST00000592643 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 PNMA3Q9UL41 463 aa14.03□□□□□ -0.16
H3F3B-212ENST00000592643 WDR46O15213 610 aaKnown RBP14.02□□□□□ -0.17
H3F3B-212ENST00000592643 KDM4AO75164 1064 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 PCP11498 1178 aaKnown RBP14.02□□□□□ -0.17
H3F3B-212ENST00000592643 GCLCP48506 637 aaPredicted RBP14.02□□□□□ -0.17
H3F3B-212ENST00000592643 IRX3P78415 501 aaPredicted RBP14.02□□□□□ -0.17
H3F3B-212ENST00000592643 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.172e-12■■□□□ 13.7
H3F3B-212ENST00000592643 IMMTQ16891 758 aaKnown RBP14.02□□□□□ -0.17
H3F3B-212ENST00000592643 FAM110CQ1W6H9 321 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 CYB5R4Q7L1T6 521 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 TNS4Q8IZW8 715 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 GMCL1P1Q8NEA9 526 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 ERO1AQ96HE7 468 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 ZKSCAN3Q9BRR0 538 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 ZSWIM5Q9P217 1185 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 CTNNA3Q9UI47 895 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 ADAMTS5Q9UNA0 930 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 TRIM17Q9Y577 477 aa14.02□□□□□ -0.17
H3F3B-212ENST00000592643 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
H3F3B-212ENST00000592643 DSG3P32926 999 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 PSMC4P43686 418 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 REPS2Q8NFH8 660 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 CHMP4CQ96CF2 233 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 ATG4CQ96DT6 458 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 TMEM47Q9BQJ4 181 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 PORCNQ9H237 461 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 SH2D4AQ9H788 454 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 EFCC1Q9HA90 598 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 TOMM22Q9NS69 142 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 SYNPO2Q9UMS6 1093 aa14.01□□□□□ -0.17
H3F3B-212ENST00000592643 E7EWF7 191 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 SLC27A2O14975 620 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 ANTXR2P58335 489 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 ERVK-9P63128 1117 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 ERVK-24P63145 666 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 COG2Q14746 738 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 RASEFQ8IZ41 740 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 TANGO6Q9C0B7 1094 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 RNF41Q9H4P4 317 aaPredicted RBP14□□□□□ -0.17
H3F3B-212ENST00000592643 SENP2Q9HC62 589 aa14□□□□□ -0.17
H3F3B-212ENST00000592643 GOPCQ9HD26 462 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms