RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 USP49Q70CQ1 688 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 TMC4Q7Z404 712 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 LRRC8AQ8IWT6 810 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 MKNK2Q9HBH9 465 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 SAP30BPQ9UHR5 308 aaKnown RBP18.04■□□□□ 0.48
MBD1-227ENST00000592060 USP17L3A6NCW0 530 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 USP17L4A6NCW7 530 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 PRR29P0C7W0 189 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 BMP6P22004 513 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 RHBDL3P58872 404 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 TPM4P67936 248 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 POSTNQ15063 836 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 TTC38Q5R3I4 469 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 MFSD14BQ5SR56 506 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 USP17L1Q7RTZ2 530 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 TBC1D22AQ8WUA7 517 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
MBD1-227ENST00000592060 FLT1P17948 1338 aa18.03■□□□□ 0.48
MBD1-227ENST00000592060 PPEF1O14829 653 aaPredicted RBP18.02■□□□□ 0.48
MBD1-227ENST00000592060 ADAMTS3O15072 1205 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 NEMFO60524 1076 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 TSPY3P0CV98 308 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 TSPY8P0CW00 308 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 SARSP49591 514 aaKnown RBP18.02■□□□□ 0.48
MBD1-227ENST00000592060 ARID5BQ14865 1188 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 DNTTIP2Q5QJE6 756 aaKnown RBP18.02■□□□□ 0.48
MBD1-227ENST00000592060 C16orf86Q6ZW13 317 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 SP8Q8IXZ3 490 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 TEX11Q8IYF3 940 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 STAG2Q8N3U4 1231 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 FERMT2Q96AC1 680 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 XPO4Q9C0E2 1151 aaKnown RBP18.02■□□□□ 0.48
MBD1-227ENST00000592060 MAD2L2Q9UI95 211 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 MAN1B1Q9UKM7 699 aa18.02■□□□□ 0.48
MBD1-227ENST00000592060 UQCRHLA0A096LP55 91 aa18.02■□□□□ 0.47
MBD1-227ENST00000592060 UQCRHP07919 91 aa18.02■□□□□ 0.47
MBD1-227ENST00000592060 PLCG2P16885 1265 aa18.02■□□□□ 0.47
MBD1-227ENST00000592060 NLRP5P59047 1200 aa18.02■□□□□ 0.47
MBD1-227ENST00000592060 ATP2C1P98194 919 aaPredicted RBP18.02■□□□□ 0.47
MBD1-227ENST00000592060 MYL5Q02045 173 aa18.02■□□□□ 0.47
MBD1-227ENST00000592060 SLC35G1Q2M3R5 365 aa18.02■□□□□ 0.47
MBD1-227ENST00000592060 OSBPL5Q9H0X9 879 aaPredicted RBP18.02■□□□□ 0.47
MBD1-227ENST00000592060 IFNKQ9P0W0 207 aa18.02■□□□□ 0.47
MBD1-227ENST00000592060 A0A087X0B3 334 aa18.01■□□□□ 0.47
MBD1-227ENST00000592060 TRAPPC10P48553 1259 aa18.01■□□□□ 0.47
MBD1-227ENST00000592060 ZNF827Q17R98 1081 aa18.01■□□□□ 0.47
MBD1-227ENST00000592060 ZNF444Q8N0Y2 327 aaPredicted RBP18.01■□□□□ 0.47
MBD1-227ENST00000592060 SH3GLB2Q9NR46 395 aa18.01■□□□□ 0.47
MBD1-227ENST00000592060 IMPACTQ9P2X3 320 aa18.01■□□□□ 0.47
MBD1-227ENST00000592060 C6orf229H3BNL8 230 aa18■□□□□ 0.47
MBD1-227ENST00000592060 GNAQP50148 359 aa18■□□□□ 0.47
MBD1-227ENST00000592060 KANK3Q6NY19 840 aa18■□□□□ 0.47
MBD1-227ENST00000592060 OLFM4Q6UX06 510 aa18■□□□□ 0.47
MBD1-227ENST00000592060 SLF2Q8IX21 1173 aa18■□□□□ 0.47
MBD1-227ENST00000592060 PRIMPOLQ96LW4 560 aa18■□□□□ 0.47
MBD1-227ENST00000592060 TMEM47Q9BQJ4 181 aa18■□□□□ 0.47
MBD1-227ENST00000592060 ATP6V0A2Q9Y487 856 aa18■□□□□ 0.47
MBD1-227ENST00000592060 LMOD1P29536 600 aaPredicted RBP18■□□□□ 0.47
MBD1-227ENST00000592060 CDK8P49336 464 aa18■□□□□ 0.47
MBD1-227ENST00000592060 CCZ1BP86790 482 aa18■□□□□ 0.47
MBD1-227ENST00000592060 CCZ1P86791 482 aaPredicted RBP18■□□□□ 0.47
MBD1-227ENST00000592060 FANCCQ00597 558 aa18■□□□□ 0.47
MBD1-227ENST00000592060 MORC3Q14149 939 aa18■□□□□ 0.47
MBD1-227ENST00000592060 ZNF174Q15697 407 aa18■□□□□ 0.47
MBD1-227ENST00000592060 GRAMD1CQ8IYS0 662 aa18■□□□□ 0.47
MBD1-227ENST00000592060 SPATA20Q8TB22 786 aa18■□□□□ 0.47
MBD1-227ENST00000592060 PALM3A6NDB9 673 aaPredicted RBP17.99■□□□□ 0.47
MBD1-227ENST00000592060 SMC2O95347 1197 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 CALML3P27482 149 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 GSDMDP57764 484 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 PIK3AP1Q6ZUJ8 805 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 FILIP1Q7Z7B0 1213 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 PDILTQ8N807 584 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 TRIML1Q8N9V2 468 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 SYMPKQ92797 1274 aaKnown RBP17.99■□□□□ 0.47
MBD1-227ENST00000592060 EPSTI1Q96J88 318 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 ZNF287Q9HBT7 754 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 ADAMTSL1Q8N6G6 1762 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 CYTH3O43739 400 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 MYO1BO43795 1136 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 ATP1A3P13637 1013 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
MBD1-227ENST00000592060 SH3RF1Q7Z6J0 888 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 BLIDQ8IZY5 108 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 MYRIPQ8NFW9 859 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 NEDD1Q8NHV4 660 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 GPKOWQ92917 476 aaPredicted RBP eCLIP17.99■□□□□ 0.47
MBD1-227ENST00000592060 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 DAGLAQ9Y4D2 1042 aa17.99■□□□□ 0.47
MBD1-227ENST00000592060 EP400Q96L91 3159 aa17.98■□□□□ 0.47
MBD1-227ENST00000592060 MYH8P13535 1937 aa17.98■□□□□ 0.47
MBD1-227ENST00000592060 M0R2N6 131 aa17.98■□□□□ 0.47
MBD1-227ENST00000592060 PTGDRQ13258 359 aa17.98■□□□□ 0.47
MBD1-227ENST00000592060 TYW1BQ6NUM6 668 aa17.98■□□□□ 0.47
MBD1-227ENST00000592060 EYA3Q99504 573 aa17.98■□□□□ 0.47
MBD1-227ENST00000592060 COA1Q9GZY4 146 aa17.98■□□□□ 0.47
MBD1-227ENST00000592060 SRGNP10124 158 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 NOVP48745 357 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 GTF2IP78347 998 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms