RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TTF2Q9UNY4 1162 aaKnown RBP17.04■□□□□ 0.32
CIRBP-228ENST00000590347 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 N4BP3O15049 544 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 LGR5O75473 907 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 THEMIS2Q5TEJ8 643 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 CHADLQ6NUI6 762 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 TRAPPC11Q7Z392 1133 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 STAMBPL1Q96FJ0 436 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 SH3GL2Q99962 352 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 C1orf167Q5SNV9 1468 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 PXDNQ92626 1479 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 A0A1B0GTH6 734 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 IFT81Q8WYA0 676 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 ZIM3Q96PE6 472 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 HPSEQ9Y251 543 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 RTN2O75298 545 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 RASSF9O75901 435 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
CIRBP-228ENST00000590347 NKX2-3Q8TAU0 364 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 MICAL1Q8TDZ2 1067 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 ABCC6O95255 1503 aa17.03■□□□□ 0.32
CIRBP-228ENST00000590347 RCCD1A6NED2 376 aa17.02■□□□□ 0.32
CIRBP-228ENST00000590347 AP1ARQ63HQ0 302 aa17.02■□□□□ 0.32
CIRBP-228ENST00000590347 TACO1Q9BSH4 297 aaKnown RBP17.02■□□□□ 0.32
CIRBP-228ENST00000590347 LACRTQ9GZZ8 138 aa17.02■□□□□ 0.32
CIRBP-228ENST00000590347 SNRKQ9NRH2 765 aa17.02■□□□□ 0.32
CIRBP-228ENST00000590347 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.32
CIRBP-228ENST00000590347 G3BP2Q9UN86 482 aaKnown RBP17.02■□□□□ 0.32
CIRBP-228ENST00000590347 CCDC121Q6ZUS5 278 aa17.02■□□□□ 0.31
CIRBP-228ENST00000590347 A1CFQ9NQ94 594 aaKnown RBP17.02■□□□□ 0.31
CIRBP-228ENST00000590347 IDEP14735 1019 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 SMTNP53814 917 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 KRT40Q6A162 431 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 KIAA1328Q86T90 577 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 FUKQ8N0W3 1084 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 PROCA1Q8NCQ7 364 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-228ENST00000590347 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-228ENST00000590347 CCDC43Q96MW1 224 aaKnown RBP17.01■□□□□ 0.31
CIRBP-228ENST00000590347 ABHD10Q9NUJ1 306 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 CRYMQ14894 314 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 APTXQ7Z2E3 356 aaKnown RBP17.01■□□□□ 0.31
CIRBP-228ENST00000590347 SENP2Q9HC62 589 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 MYH8P13535 1937 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 FAM153BP0C7A2 387 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 QPCTQ16769 361 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 FAM153CQ494X1 144 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 RESP18Q5W5W9 173 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 NLRP14Q86W24 1093 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 MYCBPAPQ8TBZ2 947 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 CPSF2Q9P2I0 782 aaKnown RBP17.01■□□□□ 0.31
CIRBP-228ENST00000590347 FAM153AQ9UHL3 310 aa17.01■□□□□ 0.31
CIRBP-228ENST00000590347 PRC1O43663 620 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 TMOD1P28289 359 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 DPYDQ12882 1025 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 PTPAQ15257 358 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 TRADDQ15628 312 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 CCDC181Q5TID7 509 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
CIRBP-228ENST00000590347 CEP120Q8N960 986 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 ENOX1Q8TC92 643 aaKnown RBP17■□□□□ 0.31
CIRBP-228ENST00000590347 FAM167BQ9BTA0 163 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 CTNND2Q9UQB3 1225 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 EPN1Q9Y6I3 576 aaPredicted RBP17■□□□□ 0.31
CIRBP-228ENST00000590347 ADAMTSL3P82987 1691 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 HSF2BPO75031 334 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 HSPD1P10809 573 aaKnown RBP17■□□□□ 0.31
CIRBP-228ENST00000590347 PSMD2Q13200 908 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 WLSQ5T9L3 541 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 NOC3LQ8WTT2 800 aaKnown RBP17■□□□□ 0.31
CIRBP-228ENST00000590347 NSMCE1Q8WV22 266 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 ADD3Q9UEY8 706 aaKnown RBP17■□□□□ 0.31
CIRBP-228ENST00000590347 KCNJ14Q9UNX9 436 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 HPS5Q9UPZ3 1129 aa17■□□□□ 0.31
CIRBP-228ENST00000590347 C11orf91Q3C1V1 193 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 BRAPQ7Z569 592 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 PNMA8AQ86V59 439 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-228ENST00000590347 ARMC2Q8NEN0 867 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 OR2W6PQ8NHA6 318 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 LMBR1Q8WVP7 490 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 TCP11Q8WWU5 503 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 OSBPL7Q9BZF2 842 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 STRN4Q9NRL3 753 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 ZMYM6O95789 1325 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 PLCD4Q9BRC7 762 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 BLZF1Q9H2G9 400 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 SYNRGQ9UMZ2 1314 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 NDUFA10O95299 355 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 ANKRD13CQ8N6S4 541 aa16.99■□□□□ 0.31
CIRBP-228ENST00000590347 AENQ8WTP8 325 aaKnown RBP16.99■□□□□ 0.31
CIRBP-228ENST00000590347 NFAT5O94916 1531 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 NCK2O43639 380 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 BUB1BO60566 1050 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-228ENST00000590347 TIMM10P62072 90 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms