RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SART3Q15020 963 aaKnown RBP8.67□□□□□ -1.02
SMAD4-210ENST00000590061 PI16Q6UXB8 463 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 TTC6Q86TZ1 520 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 GPC2Q8N158 579 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 MTMR14Q8NCE2 650 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 DOCK2Q92608 1830 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 KCNB2Q92953 911 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 OSBP2Q969R2 916 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 EDC3Q96F86 508 aaKnown RBP8.67□□□□□ -1.02
SMAD4-210ENST00000590061 LSG1Q9H089 658 aaKnown RBP8.67□□□□□ -1.02
SMAD4-210ENST00000590061 DHX36Q9H2U1 1008 aaKnown RBP8.67□□□□□ -1.02
SMAD4-210ENST00000590061 ARPP21Q9UBL0 812 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-210ENST00000590061 SLC4A4Q9Y6R1 1079 aa8.67□□□□□ -1.02
SMAD4-210ENST00000590061 WDR19Q8NEZ3 1342 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 NFKBIEO00221 500 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
SMAD4-210ENST00000590061 LMOD1P29536 600 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-210ENST00000590061 PRDX5P30044 214 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 TNNI2P48788 182 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 PDE4BQ07343 736 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 NR5A1Q13285 461 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 AGERQ15109 404 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 NECTIN1Q15223 517 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 DLGAP5Q15398 846 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 SBK1Q52WX2 424 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 PDXDC2PQ6P474 469 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 TMTC2Q8N394 836 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 NLGN2Q8NFZ4 835 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 KIFC2Q96AC6 838 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 KRT23Q9C075 422 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 WWC3Q9ULE0 1092 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 RBM8AQ9Y5S9 174 aaKnown RBP8.66□□□□□ -1.02
SMAD4-210ENST00000590061 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 KIAA1551Q9HCM1 1747 aa8.66□□□□□ -1.02
SMAD4-210ENST00000590061 FGAP02671 866 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 HLA-DOAP06340 250 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 CRKP46108 304 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 RBM5P52756 815 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMAD4-210ENST00000590061 CXCL9Q07325 125 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 CREB3L3Q68CJ9 461 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 OLFM4Q6UX06 510 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 RALYLQ86SE5 291 aaKnown RBP8.65□□□□□ -1.02
SMAD4-210ENST00000590061 TEX11Q8IYF3 940 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 IFNL3Q8IZI9 196 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 GPR101Q96P66 508 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-210ENST00000590061 PUS7LQ9H0K6 701 aaKnown RBP8.65□□□□□ -1.02
SMAD4-210ENST00000590061 ANAPC4Q9UJX5 808 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 NDUFB9Q9Y6M9 179 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 MAST2Q6P0Q8 1798 aa8.65□□□□□ -1.02
SMAD4-210ENST00000590061 MYH2Q9UKX2 1941 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 IQCA1LA6NCM1 817 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 WTIPA6NIX2 430 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-210ENST00000590061 PSMD14O00487 310 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 ENTPD3O75355 529 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 BTDP43251 543 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
SMAD4-210ENST00000590061 ZNF280AP59817 542 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-210ENST00000590061 FGD1P98174 961 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
SMAD4-210ENST00000590061 BLOC1S2Q6QNY1 142 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 MFSD6Q6ZSS7 791 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 HSCBQ8IWL3 235 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 NCOA7Q8NI08 942 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 SNX21Q969T3 373 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 ITPKCQ96DU7 683 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 GMLQ99445 158 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 RIOK1Q9BRS2 568 aaKnown RBP8.64□□□□□ -1.03
SMAD4-210ENST00000590061 IDI2Q9BXS1 227 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 ALDH8A1Q9H2A2 487 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-210ENST00000590061 USP40Q9NVE5 1235 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 AATFQ9NY61 560 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMAD4-210ENST00000590061 SWAP70Q9UH65 585 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 RBM19Q9Y4C8 960 aaKnown RBP8.64□□□□□ -1.03
SMAD4-210ENST00000590061 COL4A1P02462 1669 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 PSME4Q14997 1843 aa8.64□□□□□ -1.03
SMAD4-210ENST00000590061 DICER1Q9UPY3 1922 aaKnown RBP8.63□□□□□ -1.03
SMAD4-210ENST00000590061 ERICH2A1L162 156 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 GSG1L2A8MUP6 293 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 M0R2C6 588 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 SLC27A2O14975 620 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 RAD17O75943 681 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 POLR3DP05423 398 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-210ENST00000590061 FSHRP23945 695 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 MCM5P33992 734 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 ARID5BQ14865 1188 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 PPP2R5BQ15173 497 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 VPS53Q5VIR6 699 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 DHX32Q7L7V1 743 aaKnown RBP8.63□□□□□ -1.03
SMAD4-210ENST00000590061 ZNF589Q86UQ0 364 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-210ENST00000590061 FAM83AQ86UY5 434 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 IQCA1Q86XH1 822 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 KIAA0825Q8IV33 1275 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 FOXP4Q8IVH2 680 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-210ENST00000590061 FBXL16Q8N461 479 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 MIGA1Q8NAN2 632 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 ESR2Q92731 530 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms