RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 ZNF532Q9HCE3 1301 aa16.88■□□□□ 0.29
SF3A2-205ENST00000590034 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
SF3A2-205ENST00000590034 SMIM22K7EJ46 135 aa16.87■□□□□ 0.29
SF3A2-205ENST00000590034 GOLIM4O00461 696 aa16.87■□□□□ 0.29
SF3A2-205ENST00000590034 DLL1O00548 723 aa16.87■□□□□ 0.29
SF3A2-205ENST00000590034 CYBAP13498 195 aa16.87■□□□□ 0.29
SF3A2-205ENST00000590034 ATP2B2Q01814 1243 aa16.87■□□□□ 0.29
SF3A2-205ENST00000590034 SLFNL1Q499Z3 407 aa16.87■□□□□ 0.29
SF3A2-205ENST00000590034 CRNKL1Q9BZJ0 848 aaKnown RBP16.87■□□□□ 0.29
SF3A2-205ENST00000590034 SENP6Q9GZR1 1112 aaPredicted RBP16.87■□□□□ 0.29
SF3A2-205ENST00000590034 IVNS1ABPQ9Y6Y0 642 aa16.87■□□□□ 0.29
SF3A2-205ENST00000590034 MYH7P12883 1935 aa16.87■□□□□ 0.29
SF3A2-205ENST00000590034 ZNFX1Q9P2E3 1918 aaKnown RBP16.86■□□□□ 0.29
SF3A2-205ENST00000590034 UNC80Q8N2C7 3258 aa16.86■□□□□ 0.29
SF3A2-205ENST00000590034 MPHOSPH10O00566 681 aaKnown RBP16.86■□□□□ 0.29
SF3A2-205ENST00000590034 ADORA2AP29274 412 aa16.86■□□□□ 0.29
SF3A2-205ENST00000590034 CNGA1P29973 690 aa16.86■□□□□ 0.29
SF3A2-205ENST00000590034 TTF1Q15361 905 aaPredicted RBP16.86■□□□□ 0.29
SF3A2-205ENST00000590034 SIAH1Q8IUQ4 282 aa16.86■□□□□ 0.29
SF3A2-205ENST00000590034 LPAR1Q92633 364 aa16.86■□□□□ 0.29
SF3A2-205ENST00000590034 DYNLL2Q96FJ2 89 aa16.86■□□□□ 0.29
SF3A2-205ENST00000590034 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
SF3A2-205ENST00000590034 MTMR10Q9NXD2 777 aa16.86■□□□□ 0.29
SF3A2-205ENST00000590034 APBB1O00213 710 aa16.85■□□□□ 0.29
SF3A2-205ENST00000590034 PRKAB2O43741 272 aa16.85■□□□□ 0.29
SF3A2-205ENST00000590034 ATN1P54259 1190 aaPredicted RBP16.85■□□□□ 0.29
SF3A2-205ENST00000590034 COG2Q14746 738 aa16.85■□□□□ 0.29
SF3A2-205ENST00000590034 SIRT2Q8IXJ6 389 aa16.85■□□□□ 0.29
SF3A2-205ENST00000590034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.85■□□□□ 0.29
SF3A2-205ENST00000590034 TANGO6Q9C0B7 1094 aa16.85■□□□□ 0.29
SF3A2-205ENST00000590034 SPATC1LQ9H0A9 340 aa16.85■□□□□ 0.29
SF3A2-205ENST00000590034 ARMT1Q9H993 441 aa16.85■□□□□ 0.29
SF3A2-205ENST00000590034 DNM1LO00429 736 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 MSCO60682 206 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 COBLO75128 1261 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 CHGBP05060 677 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 AKR1B1P15121 316 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 ERCC3P19447 782 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 HSP90AB4PQ58FF6 505 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 CLASRPQ8N2M8 674 aaKnown RBP16.84■□□□□ 0.29
SF3A2-205ENST00000590034 STXBP5LQ9Y2K9 1186 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 SMCHD1A6NHR9 2005 aa16.84■□□□□ 0.29
SF3A2-205ENST00000590034 CYP2D7A0A087X1C5 515 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 GJC2Q5T442 439 aaPredicted RBP16.83■□□□□ 0.28
SF3A2-205ENST00000590034 ANO1Q5XXA6 986 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 OLFML2BQ68BL8 750 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 TMEM179Q6ZVK1 233 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 DPP9Q86TI2 863 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 SPICE1Q8N0Z3 855 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 SHCBP1Q8NEM2 672 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 ATG4CQ96DT6 458 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 KIF1BPQ96EK5 621 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 HOXC10Q9NYD6 342 aa16.83■□□□□ 0.28
SF3A2-205ENST00000590034 PLXNA1Q9UIW2 1896 aa16.82■□□□□ 0.28
SF3A2-205ENST00000590034 DSG3P32926 999 aa16.82■□□□□ 0.28
SF3A2-205ENST00000590034 ADD2P35612 726 aa16.82■□□□□ 0.28
SF3A2-205ENST00000590034 RTP1P59025 263 aa16.82■□□□□ 0.28
SF3A2-205ENST00000590034 MIER1Q8N108 512 aa16.82■□□□□ 0.28
SF3A2-205ENST00000590034 BCL11AQ9H165 835 aa16.82■□□□□ 0.28
SF3A2-205ENST00000590034 SWAP70Q9UH65 585 aa16.82■□□□□ 0.28
SF3A2-205ENST00000590034 GREB1LQ9C091 1923 aaPredicted RBP16.81■□□□□ 0.28
SF3A2-205ENST00000590034 STRNO43815 780 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 FLOT1O75955 427 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 MBD4O95243 580 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
SF3A2-205ENST00000590034 ICA1Q05084 483 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 PRAMEF19Q5SWL8 479 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 BOLA2Q9H3K6 86 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 VCPKMTQ9H867 229 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 PAG1Q9NWQ8 432 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 TMX2Q9Y320 296 aa16.81■□□□□ 0.28
SF3A2-205ENST00000590034 EYSQ5T1H1 3165 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 ZBED9Q6R2W3 1325 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 POTEB2H3BUK9 544 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 SEPT4O43236 478 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 PLS1Q14651 629 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 RPAP2Q8IXW5 612 aaPredicted RBP16.8■□□□□ 0.28
SF3A2-205ENST00000590034 MB21D1Q8N884 522 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 GUCD1Q96NT3 240 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 ZBTB40Q9NUA8 1239 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 CDH23Q9H251 3354 aa16.8■□□□□ 0.28
SF3A2-205ENST00000590034 CDK8P49336 464 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 SNX17Q15036 470 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 C12orf60Q5U649 245 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 NCAPG2Q86XI2 1143 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 MAML3Q96JK9 1138 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 LBHD1Q9BQE6 289 aaPredicted RBP16.79■□□□□ 0.28
SF3A2-205ENST00000590034 MROH8Q9H579 483 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 ARHGEF10LQ9HCE6 1279 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 ATP11BQ9Y2G3 1177 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 COG6Q9Y2V7 657 aa16.79■□□□□ 0.28
SF3A2-205ENST00000590034 USP17L12C9JPN9 530 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 USP17L21D6R901 530 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 WDR46O15213 610 aaKnown RBP16.78■□□□□ 0.28
SF3A2-205ENST00000590034 ATP5JP18859 108 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 TRIM60Q495X7 471 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 FAM47AQ5JRC9 791 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms