RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 RGS2P41220 211 aa21.7■■□□□ 1.06
H3F3B-209ENST00000589949 MAP2K5Q13163 448 aa21.7■■□□□ 1.06
H3F3B-209ENST00000589949 APBA2Q99767 749 aa21.7■■□□□ 1.06
H3F3B-209ENST00000589949 CAPN2P17655 700 aa21.69■■□□□ 1.06
H3F3B-209ENST00000589949 PTPREP23469 700 aa21.69■■□□□ 1.06
H3F3B-209ENST00000589949 LHX8Q68G74 356 aa21.69■■□□□ 1.06
H3F3B-209ENST00000589949 C16orf86Q6ZW13 317 aa21.69■■□□□ 1.06
H3F3B-209ENST00000589949 NECAB2Q7Z6G3 386 aa21.69■■□□□ 1.06
H3F3B-209ENST00000589949 SPICE1Q8N0Z3 855 aa21.69■■□□□ 1.06
H3F3B-209ENST00000589949 ANKLE1Q8NAG6 615 aa21.69■■□□□ 1.06
H3F3B-209ENST00000589949 NPLOC4Q8TAT6 608 aa21.69■■□□□ 1.06
H3F3B-209ENST00000589949 STRBPQ96SI9 672 aaKnown RBP21.69■■□□□ 1.06
H3F3B-209ENST00000589949 EVI5O60447 810 aa21.68■■□□□ 1.06
H3F3B-209ENST00000589949 CCNA1P78396 465 aa21.68■■□□□ 1.06
H3F3B-209ENST00000589949 COG2Q14746 738 aa21.68■■□□□ 1.06
H3F3B-209ENST00000589949 WDR78Q5VTH9 848 aa21.68■■□□□ 1.06
H3F3B-209ENST00000589949 OSBP2Q969R2 916 aa21.68■■□□□ 1.06
H3F3B-209ENST00000589949 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.68■■□□□ 1.06
H3F3B-209ENST00000589949 MOV10L1Q9BXT6 1211 aaKnown RBP21.68■■□□□ 1.06
H3F3B-209ENST00000589949 TANGO6Q9C0B7 1094 aa21.68■■□□□ 1.06
H3F3B-209ENST00000589949 TMX2Q9Y320 296 aa21.68■■□□□ 1.06
H3F3B-209ENST00000589949 NR2E3Q9Y5X4 410 aa21.68■■□□□ 1.06
H3F3B-209ENST00000589949 SLC15A5A6NIM6 579 aa21.67■■□□□ 1.06
H3F3B-209ENST00000589949 IGHA2P01877 340 aa21.67■■□□□ 1.06
H3F3B-209ENST00000589949 ICA1Q05084 483 aa21.67■■□□□ 1.06
H3F3B-209ENST00000589949 GRB14Q14449 540 aa21.67■■□□□ 1.06
H3F3B-209ENST00000589949 TRMT44Q8IYL2 757 aaKnown RBP21.67■■□□□ 1.06
H3F3B-209ENST00000589949 KBTBD3Q8NAB2 608 aa21.67■■□□□ 1.06
H3F3B-209ENST00000589949 OTUD7AQ8TE49 926 aaPredicted RBP21.67■■□□□ 1.06
H3F3B-209ENST00000589949 A0A0G2JMZ2 1700 aa21.66■■□□□ 1.06
H3F3B-209ENST00000589949 PFASO15067 1338 aa21.66■■□□□ 1.06
H3F3B-209ENST00000589949 GSG1L2A8MUP6 293 aa21.66■■□□□ 1.06
H3F3B-209ENST00000589949 EEF2P13639 858 aaKnown RBP21.66■■□□□ 1.06
H3F3B-209ENST00000589949 CCDC17Q96LX7 622 aa21.66■■□□□ 1.06
H3F3B-209ENST00000589949 NBPF3Q9H094 633 aa21.66■■□□□ 1.06
H3F3B-209ENST00000589949 VCPKMTQ9H867 229 aa21.66■■□□□ 1.06
H3F3B-209ENST00000589949 MYH8P13535 1937 aa21.66■■□□□ 1.06
H3F3B-209ENST00000589949 SZT2Q5T011 3432 aa21.65■■□□□ 1.06
H3F3B-209ENST00000589949 HOXC6P09630 235 aa21.65■■□□□ 1.06
H3F3B-209ENST00000589949 DSG3P32926 999 aa21.65■■□□□ 1.06
H3F3B-209ENST00000589949 ZSCAN25Q6NSZ9 544 aa21.65■■□□□ 1.06
H3F3B-209ENST00000589949 ATG4CQ96DT6 458 aa21.65■■□□□ 1.06
H3F3B-209ENST00000589949 SPATC1LQ9H0A9 340 aa21.65■■□□□ 1.06
H3F3B-209ENST00000589949 CWC22Q9HCG8 908 aaKnown RBP21.65■■□□□ 1.06
H3F3B-209ENST00000589949 HOXC10Q9NYD6 342 aa21.65■■□□□ 1.06
H3F3B-209ENST00000589949 C7orf61Q8IZ16 206 aa21.64■■□□□ 1.05
H3F3B-209ENST00000589949 TRPV1Q8NER1 839 aa21.64■■□□□ 1.05
H3F3B-209ENST00000589949 LPAR1Q92633 364 aa21.64■■□□□ 1.05
H3F3B-209ENST00000589949 C11orf49Q9H6J7 331 aa21.64■■□□□ 1.05
H3F3B-209ENST00000589949 ARHGEF10LQ9HCE6 1279 aa21.64■■□□□ 1.05
H3F3B-209ENST00000589949 EPB41L4AQ9HCS5 686 aaPredicted RBP21.64■■□□□ 1.05
H3F3B-209ENST00000589949 STAP2Q9UGK3 403 aa21.64■■□□□ 1.05
H3F3B-209ENST00000589949 M0R2C6 588 aa21.63■■□□□ 1.05
H3F3B-209ENST00000589949 GLRX3O76003 335 aaKnown RBP21.63■■□□□ 1.05
H3F3B-209ENST00000589949 COL6A1P12109 1028 aa21.63■■□□□ 1.05
H3F3B-209ENST00000589949 ERCC3P19447 782 aa21.63■■□□□ 1.05
H3F3B-209ENST00000589949 CYP2C19P33261 490 aa21.63■■□□□ 1.05
H3F3B-209ENST00000589949 STK11IPQ8N1F8 1099 aa21.63■■□□□ 1.05
H3F3B-209ENST00000589949 FBXO28Q9NVF7 368 aa21.63■■□□□ 1.05
H3F3B-209ENST00000589949 PARP14Q460N5 1801 aa21.63■■□□□ 1.05
H3F3B-209ENST00000589949 DNAH12Q6ZR08 3092 aa21.63■■□□□ 1.05
H3F3B-209ENST00000589949 RNF113AO15541 343 aaKnown RBP21.62■■□□□ 1.05
H3F3B-209ENST00000589949 COBLO75128 1261 aa21.62■■□□□ 1.05
H3F3B-209ENST00000589949 FLOT1O75955 427 aa21.62■■□□□ 1.05
H3F3B-209ENST00000589949 RASA1P20936 1047 aa21.62■■□□□ 1.05
H3F3B-209ENST00000589949 ADORA2AP29274 412 aa21.62■■□□□ 1.05
H3F3B-209ENST00000589949 SBK1Q52WX2 424 aa21.62■■□□□ 1.05
H3F3B-209ENST00000589949 PI4K2BQ8TCG2 481 aa21.62■■□□□ 1.05
H3F3B-209ENST00000589949 APPBP2Q92624 585 aa21.62■■□□□ 1.05
H3F3B-209ENST00000589949 ZMYND8Q9ULU4 1186 aaPredicted RBP21.62■■□□□ 1.05
H3F3B-209ENST00000589949 IVNS1ABPQ9Y6Y0 642 aa21.62■■□□□ 1.05
H3F3B-209ENST00000589949 GREB1LQ9C091 1923 aaPredicted RBP21.61■■□□□ 1.05
H3F3B-209ENST00000589949 ATP2B2Q01814 1243 aa21.61■■□□□ 1.05
H3F3B-209ENST00000589949 TMEM132BQ14DG7 1078 aa21.61■■□□□ 1.05
H3F3B-209ENST00000589949 MFSD14CQ5VZR4 134 aa21.61■■□□□ 1.05
H3F3B-209ENST00000589949 SAMD1Q6SPF0 538 aaPredicted RBP21.61■■□□□ 1.05
H3F3B-209ENST00000589949 AMOTL1Q8IY63 956 aa21.61■■□□□ 1.05
H3F3B-209ENST00000589949 DDRGK1Q96HY6 314 aa21.61■■□□□ 1.05
H3F3B-209ENST00000589949 SEC62Q99442 399 aaKnown RBP21.61■■□□□ 1.05
H3F3B-209ENST00000589949 KANSL2Q9H9L4 492 aa21.61■■□□□ 1.05
H3F3B-209ENST00000589949 ARPP21Q9UBL0 812 aaPredicted RBP21.61■■□□□ 1.05
H3F3B-209ENST00000589949 ADAMTS5Q9UNA0 930 aa21.61■■□□□ 1.05
H3F3B-209ENST00000589949 WDR46O15213 610 aaKnown RBP21.6■■□□□ 1.05
H3F3B-209ENST00000589949 GPAA1O43292 621 aa21.6■■□□□ 1.05
H3F3B-209ENST00000589949 PLS1Q14651 629 aa21.6■■□□□ 1.05
H3F3B-209ENST00000589949 SHCBP1Q8NEM2 672 aa21.6■■□□□ 1.05
H3F3B-209ENST00000589949 GPATCH3Q96I76 525 aa21.6■■□□□ 1.05
H3F3B-209ENST00000589949 SH2D4AQ9H788 454 aa21.6■■□□□ 1.05
H3F3B-209ENST00000589949 FRMPD3Q5JV73 1810 aa21.59■■□□□ 1.05
H3F3B-209ENST00000589949 ZNF236Q9UL36 1845 aa21.59■■□□□ 1.05
H3F3B-209ENST00000589949 SYN1P17600 705 aa21.59■■□□□ 1.05
H3F3B-209ENST00000589949 GIMAP6Q6P9H5 292 aa21.59■■□□□ 1.05
H3F3B-209ENST00000589949 MB21D1Q8N884 522 aa21.59■■□□□ 1.05
H3F3B-209ENST00000589949 GDF15Q99988 308 aa21.59■■□□□ 1.05
H3F3B-209ENST00000589949 ROBO3Q96MS0 1386 aa21.59■■□□□ 1.05
H3F3B-209ENST00000589949 MINDY4BA8MYZ0 360 aa21.58■■□□□ 1.05
H3F3B-209ENST00000589949 SOX1O00570 391 aaPredicted RBP21.58■■□□□ 1.05
H3F3B-209ENST00000589949 STRNO43815 780 aa21.58■■□□□ 1.05
H3F3B-209ENST00000589949 CYBAP13498 195 aa21.58■■□□□ 1.05
H3F3B-209ENST00000589949 RRP1P56182 461 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms