RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 IFFO2Q5TF58 517 aa20.26■□□□□ 0.83
CXXC1-212ENST00000589940 USP50Q70EL3 339 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-212ENST00000589940 RNF26Q9BY78 433 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-212ENST00000589940 EPHX2P34913 555 aa20.26■□□□□ 0.83
CXXC1-212ENST00000589940 CDC37L1Q7L3B6 337 aa20.26■□□□□ 0.83
CXXC1-212ENST00000589940 ZBTB21Q9ULJ3 1066 aa20.26■□□□□ 0.83
CXXC1-212ENST00000589940 MTMR7Q9Y216 660 aa20.26■□□□□ 0.83
CXXC1-212ENST00000589940 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
CXXC1-212ENST00000589940 PHF20L1A8MW92 1017 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 F13A1P00488 732 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 CAP2P40123 477 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 CLEC17AQ6ZS10 378 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 SRBD1Q8N5C6 995 aaKnown RBP20.25■□□□□ 0.83
CXXC1-212ENST00000589940 WASF1Q92558 559 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 IQCA1LA6NCM1 817 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 DEXIO95424 95 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 PARP1P09874 1014 aaKnown RBP20.25■□□□□ 0.83
CXXC1-212ENST00000589940 DCAF15Q66K64 600 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 SIAH1Q8IUQ4 282 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 STAG2Q8N3U4 1231 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 RGS22Q8NE09 1264 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 DCPSQ96C86 337 aaKnown RBP20.25■□□□□ 0.83
CXXC1-212ENST00000589940 C8orf76Q96K31 380 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 GBP4Q96PP9 640 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 ALG1Q9BT22 464 aa20.25■□□□□ 0.83
CXXC1-212ENST00000589940 SNHG28P0DPA3 235 aa20.24■□□□□ 0.83
CXXC1-212ENST00000589940 PDHBP11177 359 aa20.24■□□□□ 0.83
CXXC1-212ENST00000589940 CNTNAP5Q8WYK1 1306 aa20.24■□□□□ 0.83
CXXC1-212ENST00000589940 USP17L5A8MUK1 530 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 PRPF3O43395 683 aaKnown RBP20.23■□□□□ 0.83
CXXC1-212ENST00000589940 FOSBP53539 338 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 AKAP17AQ02040 695 aaKnown RBP20.23■□□□□ 0.83
CXXC1-212ENST00000589940 RASGRP2Q7LDG7 609 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 LZTS2Q9BRK4 669 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 ASNSP08243 561 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 NFKBIBQ15653 356 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 PRAMEF18Q5VWM3 479 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 USP17L2Q6R6M4 530 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 FBXO18Q8NFZ0 1043 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 ZC3H15Q8WU90 426 aaKnown RBP20.23■□□□□ 0.83
CXXC1-212ENST00000589940 AIFM3Q96NN9 605 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 SYNPO2Q9UMS6 1093 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 MYH4Q9Y623 1939 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 SCN4AP35499 1836 aa20.23■□□□□ 0.83
CXXC1-212ENST00000589940 UBE2Q2LH0YL09 131 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 ASPRV1Q53RT3 343 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 SULF1Q8IWU6 871 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 ZNF341Q9BYN7 854 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 TAF1DQ9H5J8 278 aaPredicted RBP20.22■□□□□ 0.83
CXXC1-212ENST00000589940 KLRF2D3W0D1 207 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 BAG4O95429 457 aaKnown RBP20.22■□□□□ 0.83
CXXC1-212ENST00000589940 GOLGA8HP0CJ92 632 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 SUPT20HL1Q3ZLR7 823 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 GINM1Q9NU53 330 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 ATP6V1DQ9Y5K8 247 aa20.22■□□□□ 0.83
CXXC1-212ENST00000589940 V9GY48 417 aaPredicted RBP20.22■□□□□ 0.83
CXXC1-212ENST00000589940 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
CXXC1-212ENST00000589940 ARHGEF10LQ9HCE6 1279 aa20.21■□□□□ 0.83
CXXC1-212ENST00000589940 RBM27Q9P2N5 1060 aaKnown RBP20.21■□□□□ 0.83
CXXC1-212ENST00000589940 POTECB2RU33 542 aa20.21■□□□□ 0.83
CXXC1-212ENST00000589940 CTNND1O60716 968 aaKnown RBP20.21■□□□□ 0.83
CXXC1-212ENST00000589940 GUCY1B3Q02153 619 aa20.21■□□□□ 0.83
CXXC1-212ENST00000589940 FERMT3Q86UX7 667 aa20.21■□□□□ 0.83
CXXC1-212ENST00000589940 GMCL1P1Q8NEA9 526 aa20.21■□□□□ 0.83
CXXC1-212ENST00000589940 SMARCA1P28370 1054 aa20.2■□□□□ 0.82
CXXC1-212ENST00000589940 PKN1Q16512 942 aa20.2■□□□□ 0.82
CXXC1-212ENST00000589940 SPZ1Q9BXG8 430 aa20.2■□□□□ 0.82
CXXC1-212ENST00000589940 ZNF112Q9UJU3 913 aa20.2■□□□□ 0.82
CXXC1-212ENST00000589940 A0A1W2PRG0 241 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 ZNF543Q08ER8 600 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 TRIM29Q14134 588 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 GPATCH4Q5T3I0 446 aaKnown RBP20.19■□□□□ 0.82
CXXC1-212ENST00000589940 OTUD7BQ6GQQ9 843 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 KRT26Q7Z3Y9 468 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 PNMA8AQ86V59 439 aaPredicted RBP20.19■□□□□ 0.82
CXXC1-212ENST00000589940 DCAF4Q8WV16 495 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 GJB4Q9NTQ9 266 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 SSC5DA1L4H1 1573 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 POLR2AP24928 1970 aaKnown RBP20.19■□□□□ 0.82
CXXC1-212ENST00000589940 CYTH3O43739 400 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 MCM4P33991 863 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 SLC35G1Q2M3R5 365 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 SLFN13Q68D06 897 aa20.19■□□□□ 0.82
CXXC1-212ENST00000589940 ZSCAN16Q9H4T2 348 aaPredicted RBP20.19■□□□□ 0.82
CXXC1-212ENST00000589940 FRMPD2Q68DX3 1309 aaPredicted RBP20.19■□□□□ 0.82
CXXC1-212ENST00000589940 hCG_1642624A0A1W2PR95 340 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 ADM5C9JUS6 153 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 F5H6K3 240 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 KLRC3Q07444 240 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 KRT40Q6A162 431 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.18■□□□□ 0.82
CXXC1-212ENST00000589940 TMX2Q9Y320 296 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 RESTQ13127 1097 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 EAPPQ56P03 285 aaPredicted RBP20.18■□□□□ 0.82
CXXC1-212ENST00000589940 MCTP1Q6DN14 999 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 ACER1Q8TDN7 264 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 GMCL1Q96IK5 515 aa20.18■□□□□ 0.82
CXXC1-212ENST00000589940 DCAF8L1A6NGE4 600 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 RAD21O60216 631 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 INPP5BP32019 993 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms