RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 SMARCA5O60264 1052 aaPredicted RBP28.66■■■□□ 2.18
LSM7-205ENST00000589532 EVI5O60447 810 aa28.66■■■□□ 2.18
LSM7-205ENST00000589532 AKR1B1P15121 316 aa28.66■■■□□ 2.18
LSM7-205ENST00000589532 CCNA1P78396 465 aa28.66■■■□□ 2.18
LSM7-205ENST00000589532 C12orf60Q5U649 245 aa28.66■■■□□ 2.18
LSM7-205ENST00000589532 CLEC10AQ8IUN9 316 aa28.66■■■□□ 2.18
LSM7-205ENST00000589532 CYP2D7A0A087X1C5 515 aa28.65■■■□□ 2.18
LSM7-205ENST00000589532 MPHOSPH10O00566 681 aaKnown RBP28.65■■■□□ 2.18
LSM7-205ENST00000589532 IGHA2P01877 340 aa28.65■■■□□ 2.18
LSM7-205ENST00000589532 GRB14Q14449 540 aa28.65■■■□□ 2.18
LSM7-205ENST00000589532 FLRT1Q9NZU1 646 aa28.65■■■□□ 2.18
LSM7-205ENST00000589532 HOXC6P09630 235 aa28.64■■■□□ 2.18
LSM7-205ENST00000589532 PTPREP23469 700 aa28.64■■■□□ 2.18
LSM7-205ENST00000589532 CCND3P30281 292 aaPredicted RBP28.64■■■□□ 2.18
LSM7-205ENST00000589532 LHX8Q68G74 356 aa28.64■■■□□ 2.18
LSM7-205ENST00000589532 CCAR1Q8IX12 1150 aaKnown RBP28.64■■■□□ 2.18
LSM7-205ENST00000589532 NBPF3Q9H094 633 aa28.64■■■□□ 2.18
LSM7-205ENST00000589532 PUS7LQ9H0K6 701 aaKnown RBP28.64■■■□□ 2.18
LSM7-205ENST00000589532 PFASO15067 1338 aa28.64■■■□□ 2.17
LSM7-205ENST00000589532 SLC15A5A6NIM6 579 aa28.63■■■□□ 2.17
LSM7-205ENST00000589532 C16orf86Q6ZW13 317 aa28.63■■■□□ 2.17
LSM7-205ENST00000589532 COL6A1P12109 1028 aa28.62■■■□□ 2.17
LSM7-205ENST00000589532 C11orf49Q9H6J7 331 aa28.62■■■□□ 2.17
LSM7-205ENST00000589532 TMX2Q9Y320 296 aa28.62■■■□□ 2.17
LSM7-205ENST00000589532 USP17L12C9JPN9 530 aa28.61■■■□□ 2.17
LSM7-205ENST00000589532 USP17L21D6R901 530 aa28.61■■■□□ 2.17
LSM7-205ENST00000589532 GLRX3O76003 335 aaKnown RBP28.61■■■□□ 2.17
LSM7-205ENST00000589532 CDK8P49336 464 aa28.61■■■□□ 2.17
LSM7-205ENST00000589532 ICA1Q05084 483 aa28.61■■■□□ 2.17
LSM7-205ENST00000589532 LPAR1Q92633 364 aa28.61■■■□□ 2.17
LSM7-205ENST00000589532 DCTPP1Q9H773 170 aa28.61■■■□□ 2.17
LSM7-205ENST00000589532 ECHDC1Q9NTX5 307 aa28.61■■■□□ 2.17
LSM7-205ENST00000589532 COG2Q14746 738 aa28.6■■■□□ 2.17
LSM7-205ENST00000589532 MOV10L1Q9BXT6 1211 aaKnown RBP28.6■■■□□ 2.17
LSM7-205ENST00000589532 VCPKMTQ9H867 229 aa28.6■■■□□ 2.17
LSM7-205ENST00000589532 SUPT16HQ9Y5B9 1047 aaKnown RBP28.6■■■□□ 2.17
LSM7-205ENST00000589532 A0A1W2PPC1 479 aa28.59■■■□□ 2.17
LSM7-205ENST00000589532 ZSCAN25Q6NSZ9 544 aa28.59■■■□□ 2.17
LSM7-205ENST00000589532 CTR9Q6PD62 1173 aa28.59■■■□□ 2.17
LSM7-205ENST00000589532 NPLOC4Q8TAT6 608 aa28.59■■■□□ 2.17
LSM7-205ENST00000589532 CCDC17Q96LX7 622 aa28.59■■■□□ 2.17
LSM7-205ENST00000589532 TANGO6Q9C0B7 1094 aa28.59■■■□□ 2.17
LSM7-205ENST00000589532 SLC4A4Q9Y6R1 1079 aa28.59■■■□□ 2.17
LSM7-205ENST00000589532 COL11A1P12107 1806 aaPredicted RBP28.59■■■□□ 2.17
LSM7-205ENST00000589532 ROBO3Q96MS0 1386 aa28.59■■■□□ 2.17
LSM7-205ENST00000589532 SHCBP1Q8NEM2 672 aa28.58■■■□□ 2.17
LSM7-205ENST00000589532 SPATC1LQ9H0A9 340 aa28.58■■■□□ 2.17
LSM7-205ENST00000589532 CWC22Q9HCG8 908 aaKnown RBP28.58■■■□□ 2.17
LSM7-205ENST00000589532 DSG3P32926 999 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 AAMPQ13685 434 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 WDR78Q5VTH9 848 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 C7orf61Q8IZ16 206 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 KBTBD3Q8NAB2 608 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 GDF15Q99988 308 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 SH2D4AQ9H788 454 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 ARHGEF10LQ9HCE6 1279 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 HOXC10Q9NYD6 342 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 IVNS1ABPQ9Y6Y0 642 aa28.57■■■□□ 2.16
LSM7-205ENST00000589532 MB21D1Q8N884 522 aa28.56■■■□□ 2.16
LSM7-205ENST00000589532 STRBPQ96SI9 672 aaKnown RBP28.56■■■□□ 2.16
LSM7-205ENST00000589532 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.56■■■□□ 2.16
LSM7-205ENST00000589532 ARPP21Q9UBL0 812 aaPredicted RBP28.56■■■□□ 2.16
LSM7-205ENST00000589532 WDR46O15213 610 aaKnown RBP28.55■■■□□ 2.16
LSM7-205ENST00000589532 TSHZ3Q63HK5 1081 aa28.55■■■□□ 2.16
LSM7-205ENST00000589532 SPICE1Q8N0Z3 855 aa28.55■■■□□ 2.16
LSM7-205ENST00000589532 ATG4CQ96DT6 458 aa28.55■■■□□ 2.16
LSM7-205ENST00000589532 CENPBP07199 599 aaPredicted RBP28.54■■■□□ 2.16
LSM7-205ENST00000589532 ERCC3P19447 782 aa28.54■■■□□ 2.16
LSM7-205ENST00000589532 MFSD14CQ5VZR4 134 aa28.54■■■□□ 2.16
LSM7-205ENST00000589532 AMOTL1Q8IY63 956 aa28.54■■■□□ 2.16
LSM7-205ENST00000589532 TRPV1Q8NER1 839 aa28.54■■■□□ 2.16
LSM7-205ENST00000589532 STAP2Q9UGK3 403 aa28.54■■■□□ 2.16
LSM7-205ENST00000589532 GSG1L2A8MUP6 293 aa28.53■■■□□ 2.16
LSM7-205ENST00000589532 CYBAP13498 195 aa28.53■■■□□ 2.16
LSM7-205ENST00000589532 EEF2P13639 858 aaKnown RBP28.53■■■□□ 2.16
LSM7-205ENST00000589532 ADORA2AP29274 412 aa28.53■■■□□ 2.16
LSM7-205ENST00000589532 SBK1Q52WX2 424 aa28.53■■■□□ 2.16
LSM7-205ENST00000589532 OSBP2Q969R2 916 aa28.53■■■□□ 2.16
LSM7-205ENST00000589532 DDRGK1Q96HY6 314 aa28.53■■■□□ 2.16
LSM7-205ENST00000589532 EPB41L4AQ9HCS5 686 aaPredicted RBP28.53■■■□□ 2.16
LSM7-205ENST00000589532 ZMYND8Q9ULU4 1186 aaPredicted RBP28.53■■■□□ 2.16
LSM7-205ENST00000589532 ADAMTS5Q9UNA0 930 aa28.53■■■□□ 2.16
LSM7-205ENST00000589532 FLOT1O75955 427 aa28.52■■■□□ 2.16
LSM7-205ENST00000589532 CYP2C19P33261 490 aa28.52■■■□□ 2.16
LSM7-205ENST00000589532 OLFML2BQ68BL8 750 aa28.52■■■□□ 2.16
LSM7-205ENST00000589532 APPBP2Q92624 585 aa28.52■■■□□ 2.16
LSM7-205ENST00000589532 CRBNQ96SW2 442 aa28.52■■■□□ 2.16
LSM7-205ENST00000589532 DDX20Q9UHI6 824 aaKnown RBP28.52■■■□□ 2.16
LSM7-205ENST00000589532 STRNO43815 780 aa28.51■■■□□ 2.15
LSM7-205ENST00000589532 BMP8BP34820 402 aa28.51■■■□□ 2.15
LSM7-205ENST00000589532 GIMAP6Q6P9H5 292 aa28.51■■■□□ 2.15
LSM7-205ENST00000589532 KANSL2Q9H9L4 492 aa28.51■■■□□ 2.15
LSM7-205ENST00000589532 SOX1O00570 391 aaPredicted RBP28.5■■■□□ 2.15
LSM7-205ENST00000589532 COBLO75128 1261 aa28.5■■■□□ 2.15
LSM7-205ENST00000589532 RASA1P20936 1047 aa28.5■■■□□ 2.15
LSM7-205ENST00000589532 ATP2B2Q01814 1243 aa28.5■■■□□ 2.15
LSM7-205ENST00000589532 ABRAQ8N0Z2 381 aa28.5■■■□□ 2.15
LSM7-205ENST00000589532 MROH8Q9H579 483 aa28.5■■■□□ 2.15
LSM7-205ENST00000589532 COL6A3P12111 3177 aa28.49■■■□□ 2.15
LSM7-205ENST00000589532 TMEM132BQ14DG7 1078 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms