RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 ANAPC4Q9UJX5 808 aa16.51■□□□□ 0.23
ERCC1-208ENST00000589165 ZMYM6O95789 1325 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 IGKV6D-41A0A0C4DH26 115 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 PRDM1O75626 825 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 FLT3LGP49771 235 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 MFAP1P55081 439 aaKnown RBP16.5■□□□□ 0.23
ERCC1-208ENST00000589165 ERVK-9P63128 1117 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 ERVK-24P63145 666 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 COG2Q14746 738 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 KIAA1755Q5JYT7 1200 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-208ENST00000589165 STK11IPQ8N1F8 1099 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 HOXC10Q9NYD6 342 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 GABRQQ9UN88 632 aa16.5■□□□□ 0.23
ERCC1-208ENST00000589165 SPDYE16A6NNV3 312 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-208ENST00000589165 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
ERCC1-208ENST00000589165 GRK4P32298 578 aa16.49■□□□□ 0.23
ERCC1-208ENST00000589165 Q3C1V9 767 aa16.49■□□□□ 0.23
ERCC1-208ENST00000589165 SLAIN1Q8ND83 568 aa16.49■□□□□ 0.23
ERCC1-208ENST00000589165 SH3TC2Q8TF17 1288 aa16.49■□□□□ 0.23
ERCC1-208ENST00000589165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.49■□□□□ 0.23
ERCC1-208ENST00000589165 PLIN4Q96Q06 1357 aa16.49■□□□□ 0.23
ERCC1-208ENST00000589165 WDR46O15213 610 aaKnown RBP16.48■□□□□ 0.23
ERCC1-208ENST00000589165 PEX10O60683 326 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 CNMDO75829 334 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 FGAP02671 866 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 FGRP09769 529 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 MAPK4P31152 587 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 TTC22Q5TAA0 569 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 NEDD1Q8NHV4 660 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 PXYLP1Q8TE99 480 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 GOPCQ9HD26 462 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 GJD2Q9UKL4 321 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 BRCA2P51587 3418 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
ERCC1-208ENST00000589165 ATP2B2Q01814 1243 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 MLLT1Q03111 559 aaPredicted RBP16.48■□□□□ 0.23
ERCC1-208ENST00000589165 MKL1Q969V6 931 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 MTMR4Q9NYA4 1195 aa16.48■□□□□ 0.23
ERCC1-208ENST00000589165 ORC4O43929 436 aa16.47■□□□□ 0.23
ERCC1-208ENST00000589165 TSPY3P0CV98 308 aa16.47■□□□□ 0.23
ERCC1-208ENST00000589165 TSPY8P0CW00 308 aa16.47■□□□□ 0.23
ERCC1-208ENST00000589165 CCNA1P78396 465 aa16.47■□□□□ 0.23
ERCC1-208ENST00000589165 CTDSPL2Q05D32 466 aa16.47■□□□□ 0.23
ERCC1-208ENST00000589165 CWC27Q6UX04 472 aaKnown RBP16.47■□□□□ 0.23
ERCC1-208ENST00000589165 MB21D1Q8N884 522 aa16.47■□□□□ 0.23
ERCC1-208ENST00000589165 CEP95Q96GE4 821 aa16.47■□□□□ 0.23
ERCC1-208ENST00000589165 ADCY3O60266 1144 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 TTLL1O95922 423 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 DSG3P32926 999 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 TFAP4Q01664 338 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 PPP4R3BQ5MIZ7 849 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 TMEM106CQ9BVX2 250 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 PORCNQ9H237 461 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 BTBD7Q9P203 1132 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
ERCC1-208ENST00000589165 GREB1LQ9C091 1923 aaPredicted RBP16.45■□□□□ 0.22
ERCC1-208ENST00000589165 KIAA0100Q14667 2235 aaKnown RBP16.45■□□□□ 0.22
ERCC1-208ENST00000589165 FLOT1O75955 427 aa16.45■□□□□ 0.22
ERCC1-208ENST00000589165 FAM47AQ5JRC9 791 aa16.45■□□□□ 0.22
ERCC1-208ENST00000589165 GPR142Q7Z601 462 aa16.45■□□□□ 0.22
ERCC1-208ENST00000589165 CCAR1Q8IX12 1150 aaKnown RBP16.45■□□□□ 0.22
ERCC1-208ENST00000589165 SOCS4Q8WXH5 440 aa16.45■□□□□ 0.22
ERCC1-208ENST00000589165 ADAMTS5Q9UNA0 930 aa16.45■□□□□ 0.22
ERCC1-208ENST00000589165 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
ERCC1-208ENST00000589165 F5H6K3 240 aa16.44■□□□□ 0.22
ERCC1-208ENST00000589165 PCP11498 1178 aaKnown RBP16.44■□□□□ 0.22
ERCC1-208ENST00000589165 XRCC5P13010 732 aaKnown RBP16.44■□□□□ 0.22
ERCC1-208ENST00000589165 UBXN2AP68543 259 aa16.44■□□□□ 0.22
ERCC1-208ENST00000589165 KLRC3Q07444 240 aa16.44■□□□□ 0.22
ERCC1-208ENST00000589165 PLEKHH3Q7Z736 793 aa16.44■□□□□ 0.22
ERCC1-208ENST00000589165 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
ERCC1-208ENST00000589165 USP6NLQ92738 828 aa16.44■□□□□ 0.22
ERCC1-208ENST00000589165 TACC3Q9Y6A5 838 aa16.44■□□□□ 0.22
ERCC1-208ENST00000589165 NDUFB10O96000 172 aa16.43■□□□□ 0.22
ERCC1-208ENST00000589165 ELNP15502 786 aa16.43■□□□□ 0.22
ERCC1-208ENST00000589165 MORN1Q5T089 497 aa16.43■□□□□ 0.22
ERCC1-208ENST00000589165 CENPQQ7L2Z9 268 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-208ENST00000589165 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
ERCC1-208ENST00000589165 DSCC1Q9BVC3 393 aa16.43■□□□□ 0.22
ERCC1-208ENST00000589165 INCENPQ9NQS7 918 aa16.43■□□□□ 0.22
ERCC1-208ENST00000589165 BIN2Q9UBW5 565 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-208ENST00000589165 MGAMO43451 1857 aa16.43■□□□□ 0.22
ERCC1-208ENST00000589165 TSPY2A6NKD2 308 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 INHAP05111 366 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 NOVP48745 357 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 MTFR1Q15390 333 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 SHCBP1Q8NEM2 672 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 ATG4CQ96DT6 458 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 SPATC1LQ9H0A9 340 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 PPP1R9AQ9ULJ8 1098 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 RAD21O60216 631 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms