RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 TRAPPC10P48553 1259 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 NLRP5P59047 1200 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 GRM4Q14833 912 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 LONRF3Q496Y0 759 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 OLFM4Q6UX06 510 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 FERMT2Q96AC1 680 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 SHISA4Q96DD7 197 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 LZTS2Q9BRK4 669 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 TMX4Q9H1E5 349 aaPredicted RBP17.48■□□□□ 0.39
MBD1-217ENST00000588937 KCNF1Q9H3M0 494 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 A0A087WWV3 80 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 hCG_1642624A0A1W2PR95 340 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 BIN1O00499 593 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 NEMFO60524 1076 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 ATP2B1P20020 1258 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 SLC4A8Q2Y0W8 1093 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 C16orf86Q6ZW13 317 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
MBD1-217ENST00000588937 KIAA1524Q8TCG1 905 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 FBXW7Q969H0 707 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
MBD1-217ENST00000588937 PDE6BP35913 854 aa17.47■□□□□ 0.39
MBD1-217ENST00000588937 PLCD1P51178 756 aa17.47■□□□□ 0.39
MBD1-217ENST00000588937 TNFRSF25Q93038 417 aa17.47■□□□□ 0.39
MBD1-217ENST00000588937 SAP30BPQ9UHR5 308 aaKnown RBP17.47■□□□□ 0.39
MBD1-217ENST00000588937 FLT1P17948 1338 aa17.47■□□□□ 0.39
MBD1-217ENST00000588937 RASA1P20936 1047 aa17.46■□□□□ 0.39
MBD1-217ENST00000588937 PNOCQ13519 176 aa17.46■□□□□ 0.39
MBD1-217ENST00000588937 DNTTIP2Q5QJE6 756 aaKnown RBP17.46■□□□□ 0.39
MBD1-217ENST00000588937 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.39
MBD1-217ENST00000588937 ZC3H12CQ9C0D7 883 aaKnown RBP17.46■□□□□ 0.39
MBD1-217ENST00000588937 MYH1P12882 1939 aa17.46■□□□□ 0.38
MBD1-217ENST00000588937 POLR2DO15514 142 aaKnown RBP17.45■□□□□ 0.38
MBD1-217ENST00000588937 MYO1BO43795 1136 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 SRGNP10124 158 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 CDK8P49336 464 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 RHBDL3P58872 404 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 DHX8Q14562 1220 aaKnown RBP17.45■□□□□ 0.38
MBD1-217ENST00000588937 NPY5RQ15761 445 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 TTC38Q5R3I4 469 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 EYA3Q99504 573 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
MBD1-217ENST00000588937 FOCADQ5VW36 1801 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 USP17L3A6NCW0 530 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 USP17L4A6NCW7 530 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 GTF2IP78347 998 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 POSTNQ15063 836 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 GALNT17Q6IS24 598 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 USP17L1Q7RTZ2 530 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 CCDC148Q8NFR7 591 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 CSRNP2Q9H175 543 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 DACH1Q9UI36 760 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 MAD2L2Q9UI95 211 aa17.45■□□□□ 0.38
MBD1-217ENST00000588937 MDM2Q00987 491 aaPredicted RBP17.44■□□□□ 0.38
MBD1-217ENST00000588937 SPECC1Q5M775 1068 aa17.44■□□□□ 0.38
MBD1-217ENST00000588937 TRIML1Q8N9V2 468 aa17.44■□□□□ 0.38
MBD1-217ENST00000588937 TMEM47Q9BQJ4 181 aa17.44■□□□□ 0.38
MBD1-217ENST00000588937 PYM1Q9BRP8 204 aaKnown RBP17.44■□□□□ 0.38
MBD1-217ENST00000588937 IMPACTQ9P2X3 320 aa17.44■□□□□ 0.38
MBD1-217ENST00000588937 STX8Q9UNK0 236 aa17.44■□□□□ 0.38
MBD1-217ENST00000588937 PCDHA5Q9Y5H7 936 aa17.44■□□□□ 0.38
MBD1-217ENST00000588937 MYL5Q02045 173 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 GRIN1Q05586 938 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 EARS2Q5JPH6 523 aaKnown RBP17.43■□□□□ 0.38
MBD1-217ENST00000588937 NT5DC1Q5TFE4 455 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 BLIDQ8IZY5 108 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 SLC44A5Q8NCS7 719 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 MASTLQ96GX5 879 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 SERTAD1Q9UHV2 236 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 NRBP1Q9UHY1 535 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 PYCARDQ9ULZ3 195 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 COL11A2P13942 1736 aaPredicted RBP17.43■□□□□ 0.38
MBD1-217ENST00000588937 PALM3A6NDB9 673 aaPredicted RBP17.43■□□□□ 0.38
MBD1-217ENST00000588937 FAM205CA6NFA0 338 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 RIMBP2O15034 1052 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 GSDMDP57764 484 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 ATP2C1P98194 919 aaPredicted RBP17.43■□□□□ 0.38
MBD1-217ENST00000588937 NCAPHQ15003 741 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
MBD1-217ENST00000588937 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 PCDHA4Q9UN74 947 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 DAGLAQ9Y4D2 1042 aa17.43■□□□□ 0.38
MBD1-217ENST00000588937 SMC2O95347 1197 aa17.42■□□□□ 0.38
MBD1-217ENST00000588937 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
MBD1-217ENST00000588937 ZNF174Q15697 407 aa17.42■□□□□ 0.38
MBD1-217ENST00000588937 STAG2Q8N3U4 1231 aa17.42■□□□□ 0.38
MBD1-217ENST00000588937 MLKLQ8NB16 471 aa17.42■□□□□ 0.38
MBD1-217ENST00000588937 SNED1Q8TER0 1413 aa17.42■□□□□ 0.38
MBD1-217ENST00000588937 G3V3G9 751 aa17.41■□□□□ 0.38
MBD1-217ENST00000588937 CBFA2T2O43439 604 aa17.41■□□□□ 0.38
MBD1-217ENST00000588937 ACTN4O43707 911 aaKnown RBP17.41■□□□□ 0.38
MBD1-217ENST00000588937 TOP1P11387 765 aaKnown RBP17.41■□□□□ 0.38
MBD1-217ENST00000588937 DCAF8Q5TAQ9 597 aa17.41■□□□□ 0.38
MBD1-217ENST00000588937 ISM2Q6H9L7 571 aa17.41■□□□□ 0.38
MBD1-217ENST00000588937 PIK3AP1Q6ZUJ8 805 aa17.41■□□□□ 0.38
MBD1-217ENST00000588937 FOXP4Q8IVH2 680 aaPredicted RBP17.41■□□□□ 0.38
MBD1-217ENST00000588937 DAGLBQ8NCG7 672 aa17.41■□□□□ 0.38
MBD1-217ENST00000588937 PARP1P09874 1014 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms