RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 TRAF5O00463 557 aa16.91■□□□□ 0.3
NPC1-207ENST00000588867 JAK2O60674 1132 aa16.91■□□□□ 0.3
NPC1-207ENST00000588867 CTDNEP1O95476 244 aa16.91■□□□□ 0.3
NPC1-207ENST00000588867 CPLX2Q6PUV4 134 aaKnown RBP16.91■□□□□ 0.3
NPC1-207ENST00000588867 CMTR1Q8N1G2 835 aaKnown RBP16.91■□□□□ 0.3
NPC1-207ENST00000588867 CCDC82Q8N4S0 544 aa16.91■□□□□ 0.3
NPC1-207ENST00000588867 LLPHQ9BRT6 129 aaKnown RBP16.91■□□□□ 0.3
NPC1-207ENST00000588867 ARHGEF10LQ9HCE6 1279 aa16.91■□□□□ 0.3
NPC1-207ENST00000588867 ATAD5Q96QE3 1844 aa16.9■□□□□ 0.3
NPC1-207ENST00000588867 GJB2P29033 226 aa16.9■□□□□ 0.3
NPC1-207ENST00000588867 NSUN7Q8NE18 718 aaKnown RBP16.9■□□□□ 0.3
NPC1-207ENST00000588867 MKL1Q969V6 931 aa16.9■□□□□ 0.3
NPC1-207ENST00000588867 ZNF408Q9H9D4 720 aa16.9■□□□□ 0.3
NPC1-207ENST00000588867 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
NPC1-207ENST00000588867 KIF5BP33176 963 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 ECE1P42892 770 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.29
NPC1-207ENST00000588867 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 RASGRP2Q7LDG7 609 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 SCYL3Q8IZE3 742 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 PICK1Q9NRD5 415 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
NPC1-207ENST00000588867 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 PTPDC1A2A3K4 754 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 USP17L5A8MUK1 530 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 IREB2P48200 963 aaKnown RBP16.89■□□□□ 0.29
NPC1-207ENST00000588867 USP17L2Q6R6M4 530 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 ACER1Q8TDN7 264 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 GPBP1L1Q9HC44 474 aaPredicted RBP16.89■□□□□ 0.29
NPC1-207ENST00000588867 GINM1Q9NU53 330 aa16.89■□□□□ 0.29
NPC1-207ENST00000588867 CDKL5O76039 1030 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 PARP1P09874 1014 aaKnown RBP16.88■□□□□ 0.29
NPC1-207ENST00000588867 GOLGA8HP0CJ92 632 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 GRM4Q14833 912 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 MOB2Q70IA6 237 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 STAG2Q8N3U4 1231 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.88■□□□□ 0.29
NPC1-207ENST00000588867 PHKBQ93100 1093 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
NPC1-207ENST00000588867 NID2Q14112 1375 aa16.88■□□□□ 0.29
NPC1-207ENST00000588867 PLEKHA8P1O95397 391 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 PDHBP11177 359 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 ZYXQ15942 572 aaKnown RBP16.87■□□□□ 0.29
NPC1-207ENST00000588867 NTRK3Q16288 839 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 FAM184AQ8NB25 1140 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 MAD2L2Q9UI95 211 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 F5H6K3 240 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 KLRC3Q07444 240 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 SLFN13Q68D06 897 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 SMARCC2Q8TAQ2 1214 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 FEZ1Q99689 392 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 TMX2Q9Y320 296 aa16.87■□□□□ 0.29
NPC1-207ENST00000588867 FRMPD2Q68DX3 1309 aaPredicted RBP16.87■□□□□ 0.29
NPC1-207ENST00000588867 PTPRAP18433 802 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
NPC1-207ENST00000588867 SSRP1Q08945 709 aaKnown RBP16.86■□□□□ 0.29
NPC1-207ENST00000588867 CCDC96Q2M329 555 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.86■□□□□ 0.29
NPC1-207ENST00000588867 TMTC3Q6ZXV5 915 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 ARMC9Q7Z3E5 817 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 SLC26A6Q9BXS9 759 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 CSADQ9Y600 493 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 DOCK1Q14185 1865 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 PALM3A6NDB9 673 aaPredicted RBP16.86■□□□□ 0.29
NPC1-207ENST00000588867 KLRF2D3W0D1 207 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 IFNAR1P17181 557 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 SLC1A4P43007 532 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 GNAQP50148 359 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 VGLL4Q14135 290 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 CHADLQ6NUI6 762 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 SPICE1Q8N0Z3 855 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 SRBD1Q8N5C6 995 aaKnown RBP16.86■□□□□ 0.29
NPC1-207ENST00000588867 SH2D4AQ9H788 454 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 GOPCQ9HD26 462 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 GPCPD1Q9NPB8 672 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 ORC3Q9UBD5 711 aaPredicted RBP16.86■□□□□ 0.29
NPC1-207ENST00000588867 ZHX2Q9Y6X8 837 aa16.86■□□□□ 0.29
NPC1-207ENST00000588867 NOL9Q5SY16 702 aaKnown RBP16.85■□□□□ 0.29
NPC1-207ENST00000588867 KCTD1Q719H9 257 aa16.85■□□□□ 0.29
NPC1-207ENST00000588867 TRIM22Q8IYM9 498 aa16.85■□□□□ 0.29
NPC1-207ENST00000588867 GMCL1P1Q8NEA9 526 aa16.85■□□□□ 0.29
NPC1-207ENST00000588867 AS3MTQ9HBK9 375 aa16.85■□□□□ 0.29
NPC1-207ENST00000588867 NDUFB10O96000 172 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 SNHG28P0DPA3 235 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 FDPSP14324 419 aaKnown RBP16.84■□□□□ 0.29
NPC1-207ENST00000588867 DDIT3P35638 169 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 AKAP17AQ02040 695 aaKnown RBP16.84■□□□□ 0.29
NPC1-207ENST00000588867 SPP2Q13103 211 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 ASPRV1Q53RT3 343 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
NPC1-207ENST00000588867 NBPF11Q86T75 865 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 ANKRD13AQ8IZ07 590 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 PIBF1Q8WXW3 757 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 UBE2Q2LH0YL09 131 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
NPC1-207ENST00000588867 FOSBP53539 338 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms