RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 MINDY4BA8MYZ0 360 aa21.58■■□□□ 1.05
HDAC5-209ENST00000588703 IGHDP01880 384 aa21.58■■□□□ 1.05
HDAC5-209ENST00000588703 GJB1P08034 283 aa21.58■■□□□ 1.05
HDAC5-209ENST00000588703 MAPK4P31152 587 aa21.58■■□□□ 1.05
HDAC5-209ENST00000588703 TDO2P48775 406 aa21.58■■□□□ 1.05
HDAC5-209ENST00000588703 RWDD1Q9H446 243 aaPredicted RBP21.58■■□□□ 1.05
HDAC5-209ENST00000588703 ARHGEF10LQ9HCE6 1279 aa21.58■■□□□ 1.05
HDAC5-209ENST00000588703 BTBD7Q9P203 1132 aa21.58■■□□□ 1.05
HDAC5-209ENST00000588703 PATL2C9JE40 543 aaKnown RBP21.57■■□□□ 1.04
HDAC5-209ENST00000588703 EEF2P13639 858 aaKnown RBP21.57■■□□□ 1.04
HDAC5-209ENST00000588703 GJA8P48165 433 aa21.57■■□□□ 1.04
HDAC5-209ENST00000588703 PRPF38BQ5VTL8 546 aaKnown RBP21.57■■□□□ 1.04
HDAC5-209ENST00000588703 GPR142Q7Z601 462 aa21.57■■□□□ 1.04
HDAC5-209ENST00000588703 IFNL3Q8IZI9 196 aa21.57■■□□□ 1.04
HDAC5-209ENST00000588703 STK11IPQ8N1F8 1099 aa21.57■■□□□ 1.04
HDAC5-209ENST00000588703 VCPKMTQ9H867 229 aa21.57■■□□□ 1.04
HDAC5-209ENST00000588703 SUPT16HQ9Y5B9 1047 aaKnown RBP21.57■■□□□ 1.04
HDAC5-209ENST00000588703 FOXP2O15409 715 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 APPP05067 770 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 SPICE1Q8N0Z3 855 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 LPAR1Q92633 364 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 USP6NLQ92738 828 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 EVI5LQ96CN4 794 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 SH2D4AQ9H788 454 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 KANSL2Q9H9L4 492 aa21.56■■□□□ 1.04
HDAC5-209ENST00000588703 HMGCRP04035 888 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 CYP2B6P20813 491 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 TRIM32Q13049 653 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 MORN1Q5T089 497 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 B4GALNT3Q6L9W6 998 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 CCDC129Q6ZRS4 1044 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 PLEKHH3Q7Z736 793 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 NKX2-3Q8TAU0 364 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 SOCS4Q8WXH5 440 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 TRIB2Q92519 343 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 NUDT12Q9BQG2 462 aa21.55■■□□□ 1.04
HDAC5-209ENST00000588703 COG2Q14746 738 aa21.54■■□□□ 1.04
HDAC5-209ENST00000588703 U2AF1L4Q8WU68 220 aaKnown RBP21.54■■□□□ 1.04
HDAC5-209ENST00000588703 MKNK2Q9HBH9 465 aa21.54■■□□□ 1.04
HDAC5-209ENST00000588703 PAK6Q9NQU5 681 aaPredicted RBP21.54■■□□□ 1.04
HDAC5-209ENST00000588703 ZNF236Q9UL36 1845 aa21.53■■□□□ 1.04
HDAC5-209ENST00000588703 WDR46O15213 610 aaKnown RBP21.53■■□□□ 1.04
HDAC5-209ENST00000588703 PRDM1O75626 825 aa21.53■■□□□ 1.04
HDAC5-209ENST00000588703 XRCC5P13010 732 aaKnown RBP21.53■■□□□ 1.04
HDAC5-209ENST00000588703 CCNA1P78396 465 aa21.53■■□□□ 1.04
HDAC5-209ENST00000588703 ATP2B2Q01814 1243 aa21.53■■□□□ 1.04
HDAC5-209ENST00000588703 NUCB1Q02818 461 aa21.53■■□□□ 1.04
HDAC5-209ENST00000588703 UBE2Q1Q7Z7E8 422 aa21.53■■□□□ 1.04
HDAC5-209ENST00000588703 CCAR1Q8IX12 1150 aaKnown RBP21.53■■□□□ 1.04
HDAC5-209ENST00000588703 NACAP1Q9BZK3 213 aa21.53■■□□□ 1.04
HDAC5-209ENST00000588703 IGKV6D-41A0A0C4DH26 115 aa21.52■■□□□ 1.04
HDAC5-209ENST00000588703 SGPL1O95470 568 aa21.52■■□□□ 1.04
HDAC5-209ENST00000588703 DSG3P32926 999 aa21.52■■□□□ 1.04
HDAC5-209ENST00000588703 CHD1LQ86WJ1 897 aa21.52■■□□□ 1.04
HDAC5-209ENST00000588703 NAPBQ9H115 298 aa21.52■■□□□ 1.04
HDAC5-209ENST00000588703 HOXC10Q9NYD6 342 aa21.52■■□□□ 1.04
HDAC5-209ENST00000588703 FLOT1O75955 427 aa21.51■■□□□ 1.03
HDAC5-209ENST00000588703 ATG4CQ96DT6 458 aa21.51■■□□□ 1.03
HDAC5-209ENST00000588703 DEFB118Q96PH6 123 aa21.51■■□□□ 1.03
HDAC5-209ENST00000588703 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.51■■□□□ 1.03
HDAC5-209ENST00000588703 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
HDAC5-209ENST00000588703 PLIN4Q96Q06 1357 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 A0A0D9SFI3 127 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 RGS2P41220 211 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 PPARAQ07869 468 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 CCL14Q16627 93 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 MAP3K21Q5TCX8 1036 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 VPS53Q5VIR6 699 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 WDR78Q5VTH9 848 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 PLEKHM2Q8IWE5 1019 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 FAM227BQ96M60 508 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 APBA2Q99767 749 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 MOV10L1Q9BXT6 1211 aaKnown RBP21.5■■□□□ 1.03
HDAC5-209ENST00000588703 GOPCQ9HD26 462 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 FBXO28Q9NVF7 368 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 NYAP2Q9P242 653 aa21.5■■□□□ 1.03
HDAC5-209ENST00000588703 SLC15A5A6NIM6 579 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 ZKSCAN1P17029 563 aaPredicted RBP21.49■■□□□ 1.03
HDAC5-209ENST00000588703 PTPREP23469 700 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 MAP2K5Q13163 448 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 SPATC1LQ9H0A9 340 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 CRISPLD2Q9H0B8 497 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 ZNF287Q9HBT7 754 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 CWC22Q9HCG8 908 aaKnown RBP21.49■■□□□ 1.03
HDAC5-209ENST00000588703 HELLSQ9NRZ9 838 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 FRMPD3Q5JV73 1810 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 RPTORQ8N122 1335 aa21.49■■□□□ 1.03
HDAC5-209ENST00000588703 PRKAR2AP13861 404 aaKnown RBP21.48■■□□□ 1.03
HDAC5-209ENST00000588703 GRB14Q14449 540 aa21.48■■□□□ 1.03
HDAC5-209ENST00000588703 FAM83BQ5T0W9 1011 aa21.48■■□□□ 1.03
HDAC5-209ENST00000588703 ZNF444Q8N0Y2 327 aaPredicted RBP21.48■■□□□ 1.03
HDAC5-209ENST00000588703 MB21D1Q8N884 522 aa21.48■■□□□ 1.03
HDAC5-209ENST00000588703 OSBPL3Q9H4L5 887 aa21.48■■□□□ 1.03
HDAC5-209ENST00000588703 ADAMTS5Q9UNA0 930 aa21.48■■□□□ 1.03
HDAC5-209ENST00000588703 ALPK3Q96L96 1907 aa21.48■■□□□ 1.03
HDAC5-209ENST00000588703 FARP2O94887 1054 aaPredicted RBP21.47■■□□□ 1.03
HDAC5-209ENST00000588703 SAMD1Q6SPF0 538 aaPredicted RBP21.47■■□□□ 1.03
HDAC5-209ENST00000588703 TICAM2Q86XR7 235 aa21.47■■□□□ 1.03
HDAC5-209ENST00000588703 TRMT44Q8IYL2 757 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms