RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 WDR46O15213 610 aaKnown RBP12.51□□□□□ -0.41
TPM4-209ENST00000588483 CNMDO75829 334 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 FGRP09769 529 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
TPM4-209ENST00000588483 PDE4AP27815 886 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 GRK4P32298 578 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 FLT3LGP49771 235 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 IRX6P78412 446 aaPredicted RBP12.51□□□□□ -0.41
TPM4-209ENST00000588483 MLLT1Q03111 559 aaPredicted RBP12.51□□□□□ -0.41
TPM4-209ENST00000588483 PPARAQ07869 468 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 CCDC129Q6ZRS4 1044 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 COA7Q96BR5 231 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 MKNK2Q9HBH9 465 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 NYAP2Q9P242 653 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 GJD2Q9UKL4 321 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 GABRQQ9UN88 632 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
TPM4-209ENST00000588483 PDE4DIPQ5VU43 2346 aa12.51□□□□□ -0.41
TPM4-209ENST00000588483 MYH4Q9Y623 1939 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 HIP1O00291 1037 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 SLC3A2P08195 630 aaKnown RBP12.5□□□□□ -0.41
TPM4-209ENST00000588483 SDSP20132 328 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 MAPK4P31152 587 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 PDE4BQ07343 736 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 NMIQ13287 307 aaPredicted RBP12.5□□□□□ -0.41
TPM4-209ENST00000588483 COG2Q14746 738 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 Q3C1V9 767 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 ZNF589Q86UQ0 364 aaPredicted RBP12.5□□□□□ -0.41
TPM4-209ENST00000588483 SH3TC2Q8TF17 1288 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 MKL1Q969V6 931 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
TPM4-209ENST00000588483 ZNF236Q9UL36 1845 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 HSPD1P10809 573 aaKnown RBP12.49□□□□□ -0.41
TPM4-209ENST00000588483 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
TPM4-209ENST00000588483 MB21D1Q8N884 522 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 NEDD1Q8NHV4 660 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 USP6NLQ92738 828 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 RILPL2Q969X0 211 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 GOPCQ9HD26 462 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 MTMR4Q9NYA4 1195 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 HOXC10Q9NYD6 342 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 ADAMTS5Q9UNA0 930 aa12.49□□□□□ -0.41
TPM4-209ENST00000588483 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 ORC4O43929 436 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 ADCY3O60266 1144 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 PEX10O60683 326 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 PRDM1O75626 825 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 FGAP02671 866 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 XRCC5P13010 732 aaKnown RBP12.48□□□□□ -0.41
TPM4-209ENST00000588483 GSPT1P15170 499 aaKnown RBP12.48□□□□□ -0.41
TPM4-209ENST00000588483 DSG3P32926 999 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 NOVP48745 357 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 CCNA1P78396 465 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 TTC22Q5TAA0 569 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
TPM4-209ENST00000588483 PORCNQ9H237 461 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 BTBD7Q9P203 1132 aa12.48□□□□□ -0.41
TPM4-209ENST00000588483 TTLL1O95922 423 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 PCP11498 1178 aaKnown RBP12.47□□□□□ -0.41
TPM4-209ENST00000588483 CAPN2P17655 700 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 NT5C2P49902 561 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 UBXN2AP68543 259 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 MORN1Q5T089 497 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 GPR142Q7Z601 462 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 GMCL1P1Q8NEA9 526 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 CEP95Q96GE4 821 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 PAGR1Q9BTK6 254 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 TANGO6Q9C0B7 1094 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 TACC3Q9Y6A5 838 aa12.47□□□□□ -0.41
TPM4-209ENST00000588483 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.41
TPM4-209ENST00000588483 FLOT1O75955 427 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
TPM4-209ENST00000588483 HMGCRP04035 888 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 TSPY3P0CV98 308 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 TSPY8P0CW00 308 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 MTFR1Q15390 333 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 PLEKHH3Q7Z736 793 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 SHCBP1Q8NEM2 672 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 SPATC1LQ9H0A9 340 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.41
TPM4-209ENST00000588483 RAD50Q92878 1312 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 SLC15A5A6NIM6 579 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 F5H6K3 240 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 NDUFB10O96000 172 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 INHAP05111 366 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 GJB1P08034 283 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 HOXC6P09630 235 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 ELNP15502 786 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 TFAP4Q01664 338 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms