RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 RASA1P20936 1047 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 NUCB1Q02818 461 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 COG2Q14746 738 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 LBX2Q6XYB7 198 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 ZNF444Q8N0Y2 327 aaPredicted RBP23.33■■□□□ 1.33
TPM4-208ENST00000588410 SPICE1Q8N0Z3 855 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 SOCS4Q8WXH5 440 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 NUDT12Q9BQG2 462 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 GJD2Q9UKL4 321 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 ROBO3Q96MS0 1386 aa23.32■■□□□ 1.32
TPM4-208ENST00000588410 SPDYE16A6NNV3 312 aaPredicted RBP23.32■■□□□ 1.32
TPM4-208ENST00000588410 RAD21O60216 631 aa23.32■■□□□ 1.32
TPM4-208ENST00000588410 WDR78Q5VTH9 848 aa23.32■■□□□ 1.32
TPM4-208ENST00000588410 PLEKHH3Q7Z736 793 aa23.32■■□□□ 1.32
TPM4-208ENST00000588410 UNC93B1Q9H1C4 597 aa23.32■■□□□ 1.32
TPM4-208ENST00000588410 PORCNQ9H237 461 aa23.32■■□□□ 1.32
TPM4-208ENST00000588410 GOPCQ9HD26 462 aa23.32■■□□□ 1.32
TPM4-208ENST00000588410 CNMDO75829 334 aa23.31■■□□□ 1.32
TPM4-208ENST00000588410 GJB1P08034 283 aa23.31■■□□□ 1.32
TPM4-208ENST00000588410 CYP2B6P20813 491 aa23.31■■□□□ 1.32
TPM4-208ENST00000588410 POTEEQ6S8J3 1075 aa23.31■■□□□ 1.32
TPM4-208ENST00000588410 CCDC129Q6ZRS4 1044 aa23.31■■□□□ 1.32
TPM4-208ENST00000588410 GPR142Q7Z601 462 aa23.31■■□□□ 1.32
TPM4-208ENST00000588410 RILPL2Q969X0 211 aa23.31■■□□□ 1.32
TPM4-208ENST00000588410 HELLSQ9NRZ9 838 aa23.31■■□□□ 1.32
TPM4-208ENST00000588410 WDR46O15213 610 aaKnown RBP23.3■■□□□ 1.32
TPM4-208ENST00000588410 PRDM1O75626 825 aa23.3■■□□□ 1.32
TPM4-208ENST00000588410 FLOT1O75955 427 aa23.3■■□□□ 1.32
TPM4-208ENST00000588410 HMGCRP04035 888 aa23.3■■□□□ 1.32
TPM4-208ENST00000588410 PDE4BQ07343 736 aa23.3■■□□□ 1.32
TPM4-208ENST00000588410 KIAA1755Q5JYT7 1200 aa23.3■■□□□ 1.32
TPM4-208ENST00000588410 TICAM2Q86XR7 235 aa23.3■■□□□ 1.32
TPM4-208ENST00000588410 GJA8P48165 433 aa23.29■■□□□ 1.32
TPM4-208ENST00000588410 PPARAQ07869 468 aa23.29■■□□□ 1.32
TPM4-208ENST00000588410 SAMD1Q6SPF0 538 aaPredicted RBP23.29■■□□□ 1.32
TPM4-208ENST00000588410 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.29■■□□□ 1.32
TPM4-208ENST00000588410 BTBD7Q9P203 1132 aa23.29■■□□□ 1.32
TPM4-208ENST00000588410 MYH7P12883 1935 aa23.28■■□□□ 1.32
TPM4-208ENST00000588410 RGS2P41220 211 aa23.28■■□□□ 1.32
TPM4-208ENST00000588410 IRX6P78412 446 aaPredicted RBP23.28■■□□□ 1.32
TPM4-208ENST00000588410 PLEKHM2Q8IWE5 1019 aa23.28■■□□□ 1.32
TPM4-208ENST00000588410 TRMT44Q8IYL2 757 aaKnown RBP23.28■■□□□ 1.32
TPM4-208ENST00000588410 MB21D1Q8N884 522 aa23.28■■□□□ 1.32
TPM4-208ENST00000588410 NYAP2Q9P242 653 aa23.28■■□□□ 1.32
TPM4-208ENST00000588410 IVNS1ABPQ9Y6Y0 642 aa23.28■■□□□ 1.32
TPM4-208ENST00000588410 XRCC5P13010 732 aaKnown RBP23.27■■□□□ 1.32
TPM4-208ENST00000588410 DSG3P32926 999 aa23.27■■□□□ 1.32
TPM4-208ENST00000588410 MCMDC2Q4G0Z9 681 aa23.27■■□□□ 1.32
TPM4-208ENST00000588410 U2AF1L4Q8WU68 220 aaKnown RBP23.27■■□□□ 1.32
TPM4-208ENST00000588410 TSPY3P0CV98 308 aa23.26■■□□□ 1.31
TPM4-208ENST00000588410 TSPY8P0CW00 308 aa23.26■■□□□ 1.31
TPM4-208ENST00000588410 ZKSCAN1P17029 563 aaPredicted RBP23.26■■□□□ 1.31
TPM4-208ENST00000588410 MORN1Q5T089 497 aa23.26■■□□□ 1.31
TPM4-208ENST00000588410 PRPF38BQ5VTL8 546 aaKnown RBP23.26■■□□□ 1.31
TPM4-208ENST00000588410 FAM227BQ96M60 508 aa23.26■■□□□ 1.31
TPM4-208ENST00000588410 OSBPL3Q9H4L5 887 aa23.26■■□□□ 1.31
TPM4-208ENST00000588410 CLIP2Q9UDT6 1046 aa23.26■■□□□ 1.31
TPM4-208ENST00000588410 SGPL1O95470 568 aa23.25■■□□□ 1.31
TPM4-208ENST00000588410 PLS1Q14651 629 aa23.25■■□□□ 1.31
TPM4-208ENST00000588410 TRIB2Q92519 343 aa23.25■■□□□ 1.31
TPM4-208ENST00000588410 SHISA4Q96DD7 197 aa23.25■■□□□ 1.31
TPM4-208ENST00000588410 ATG4CQ96DT6 458 aa23.25■■□□□ 1.31
TPM4-208ENST00000588410 DEFB118Q96PH6 123 aa23.25■■□□□ 1.31
TPM4-208ENST00000588410 APBA2Q99767 749 aa23.25■■□□□ 1.31
TPM4-208ENST00000588410 BAZ2AQ9UIF9 1905 aaKnown RBP23.25■■□□□ 1.31
TPM4-208ENST00000588410 A0A0D9SFI3 127 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 SLC15A5A6NIM6 579 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 TFRCP02786 760 aaKnown RBP23.24■■□□□ 1.31
TPM4-208ENST00000588410 CAPN2P17655 700 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 PTPREP23469 700 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 MAP2K5Q13163 448 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 NMIQ13287 307 aaPredicted RBP23.24■■□□□ 1.31
TPM4-208ENST00000588410 FAM83BQ5T0W9 1011 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 VPS53Q5VIR6 699 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 USP6NLQ92738 828 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 MOV10L1Q9BXT6 1211 aaKnown RBP23.24■■□□□ 1.31
TPM4-208ENST00000588410 SPATC1LQ9H0A9 340 aa23.24■■□□□ 1.31
TPM4-208ENST00000588410 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.24■■□□□ 1.313e-6■■■■■ 28.2
TPM4-208ENST00000588410 HMX1Q9NP08 348 aaPredicted RBP23.24■■□□□ 1.31
TPM4-208ENST00000588410 IGKV6D-41A0A0C4DH26 115 aa23.23■■□□□ 1.31
TPM4-208ENST00000588410 TFAP4Q01664 338 aa23.23■■□□□ 1.31
TPM4-208ENST00000588410 FAM47AQ5JRC9 791 aa23.23■■□□□ 1.31
TPM4-208ENST00000588410 NEDD1Q8NHV4 660 aa23.23■■□□□ 1.31
TPM4-208ENST00000588410 PAK6Q9NQU5 681 aaPredicted RBP23.23■■□□□ 1.31
TPM4-208ENST00000588410 MTMR4Q9NYA4 1195 aa23.23■■□□□ 1.31
TPM4-208ENST00000588410 RPTORQ8N122 1335 aa23.23■■□□□ 1.31
TPM4-208ENST00000588410 MGAMO43451 1857 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 F5H6K3 240 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 FOXP2O15409 715 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 TTLL1O95922 423 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 SDSP20132 328 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 MFAP1P55081 439 aaKnown RBP23.22■■□□□ 1.31
TPM4-208ENST00000588410 CTDSPL2Q05D32 466 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 KLRC3Q07444 240 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 TRIM32Q13049 653 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 ALX1Q15699 326 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 SHCBP1Q8NEM2 672 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 CEP95Q96GE4 821 aa23.22■■□□□ 1.31
TPM4-208ENST00000588410 NDUFB10O96000 172 aa23.21■■□□□ 1.31
TPM4-208ENST00000588410 PRKAR2AP13861 404 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms