RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 MBD4O95243 580 aa20.3■□□□□ 0.84
LINC01842-201ENST00000588275 COL6A1P12109 1028 aa20.3■□□□□ 0.84
LINC01842-201ENST00000588275 BMP8BP34820 402 aa20.3■□□□□ 0.84
LINC01842-201ENST00000588275 GRB14Q14449 540 aa20.3■□□□□ 0.84
LINC01842-201ENST00000588275 LRRC26Q2I0M4 334 aa20.3■□□□□ 0.84
LINC01842-201ENST00000588275 CLEC10AQ8IUN9 316 aa20.3■□□□□ 0.84
LINC01842-201ENST00000588275 NPLOC4Q8TAT6 608 aa20.3■□□□□ 0.84
LINC01842-201ENST00000588275 PRKAB2O43741 272 aa20.29■□□□□ 0.84
LINC01842-201ENST00000588275 CYP2C19P33261 490 aa20.29■□□□□ 0.84
LINC01842-201ENST00000588275 COG2Q14746 738 aa20.29■□□□□ 0.84
LINC01842-201ENST00000588275 TMEM179Q6ZVK1 233 aa20.29■□□□□ 0.84
LINC01842-201ENST00000588275 DPP9Q86TI2 863 aa20.29■□□□□ 0.84
LINC01842-201ENST00000588275 SIRT2Q8IXJ6 389 aa20.29■□□□□ 0.84
LINC01842-201ENST00000588275 MOV10L1Q9BXT6 1211 aaKnown RBP20.29■□□□□ 0.84
LINC01842-201ENST00000588275 UBE2OQ9C0C9 1292 aaKnown RBP20.29■□□□□ 0.84
LINC01842-201ENST00000588275 SWAP70Q9UH65 585 aa20.29■□□□□ 0.84
LINC01842-201ENST00000588275 DDX20Q9UHI6 824 aaKnown RBP20.29■□□□□ 0.84
LINC01842-201ENST00000588275 RAB11FIP3O75154 756 aa20.28■□□□□ 0.84
LINC01842-201ENST00000588275 PLS1Q14651 629 aa20.28■□□□□ 0.84
LINC01842-201ENST00000588275 SPICE1Q8N0Z3 855 aa20.28■□□□□ 0.84
LINC01842-201ENST00000588275 SENP6Q9GZR1 1112 aaPredicted RBP20.28■□□□□ 0.84
LINC01842-201ENST00000588275 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.28■□□□□ 0.84
LINC01842-201ENST00000588275 ARHGEF10LQ9HCE6 1279 aa20.28■□□□□ 0.84
LINC01842-201ENST00000588275 ZBTB40Q9NUA8 1239 aa20.28■□□□□ 0.84
LINC01842-201ENST00000588275 HOXC10Q9NYD6 342 aa20.28■□□□□ 0.84
LINC01842-201ENST00000588275 AKR1B1P15121 316 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 ADORA2AP29274 412 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 ADD2P35612 726 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 ICA1Q05084 483 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 KIAA1755Q5JYT7 1200 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 AMOTL1Q8IY63 956 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 TDHQ8IZJ6 230 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 SPATC1LQ9H0A9 340 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 MYH7P12883 1935 aa20.27■□□□□ 0.84
LINC01842-201ENST00000588275 A0A0G2JMZ2 1700 aa20.27■□□□□ 0.83
LINC01842-201ENST00000588275 CYP2D7A0A087X1C5 515 aa20.26■□□□□ 0.83
LINC01842-201ENST00000588275 FLOT1O75955 427 aa20.26■□□□□ 0.83
LINC01842-201ENST00000588275 HOXC6P09630 235 aa20.26■□□□□ 0.83
LINC01842-201ENST00000588275 ERCC3P19447 782 aa20.26■□□□□ 0.83
LINC01842-201ENST00000588275 ATN1P54259 1190 aaPredicted RBP20.26■□□□□ 0.83
LINC01842-201ENST00000588275 MDM2Q00987 491 aaPredicted RBP20.26■□□□□ 0.83
LINC01842-201ENST00000588275 SMIM22K7EJ46 135 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 MSCO60682 206 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 MYCNP04198 464 aaPredicted RBP20.25■□□□□ 0.83
LINC01842-201ENST00000588275 CHGBP05060 677 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 NCAPG2Q86XI2 1143 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 LPAR1Q92633 364 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 ATG4CQ96DT6 458 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 DDRGK1Q96HY6 314 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 SH2D4AQ9H788 454 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 ATP8A2Q9NTI2 1148 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 RLFQ13129 1914 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 ZNF236Q9UL36 1845 aa20.25■□□□□ 0.83
LINC01842-201ENST00000588275 ATP5JP18859 108 aa20.24■□□□□ 0.83
LINC01842-201ENST00000588275 DSG3P32926 999 aa20.24■□□□□ 0.83
LINC01842-201ENST00000588275 ANO1Q5XXA6 986 aa20.24■□□□□ 0.83
LINC01842-201ENST00000588275 SLC17A8Q8NDX2 589 aa20.24■□□□□ 0.83
LINC01842-201ENST00000588275 TRPV1Q8NER1 839 aa20.24■□□□□ 0.83
LINC01842-201ENST00000588275 HAUS7Q99871 368 aa20.24■□□□□ 0.83
LINC01842-201ENST00000588275 CHMP4BQ9H444 224 aaKnown RBP20.24■□□□□ 0.83
LINC01842-201ENST00000588275 VCPKMTQ9H867 229 aa20.24■□□□□ 0.83
LINC01842-201ENST00000588275 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
LINC01842-201ENST00000588275 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 USP17L21D6R901 530 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 RAD21O60216 631 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 CYBAP13498 195 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 CDK8P49336 464 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 Q7L0L9 218 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 DEFB123Q8N688 67 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 MB21D1Q8N884 522 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 SHCBP1Q8NEM2 672 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 TMX2Q9Y320 296 aa20.23■□□□□ 0.83
LINC01842-201ENST00000588275 DNM1LO00429 736 aa20.22■□□□□ 0.83
LINC01842-201ENST00000588275 STRNO43815 780 aa20.22■□□□□ 0.83
LINC01842-201ENST00000588275 SMARCA5O60264 1052 aaPredicted RBP20.22■□□□□ 0.83
LINC01842-201ENST00000588275 LRIT3Q3SXY7 679 aa20.22■□□□□ 0.83
LINC01842-201ENST00000588275 GJC2Q5T442 439 aaPredicted RBP20.22■□□□□ 0.83
LINC01842-201ENST00000588275 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
LINC01842-201ENST00000588275 OLFML2BQ68BL8 750 aa20.22■□□□□ 0.83
LINC01842-201ENST00000588275 CCDC17Q96LX7 622 aa20.22■□□□□ 0.83
LINC01842-201ENST00000588275 SLC5A4Q9NY91 659 aa20.22■□□□□ 0.83
LINC01842-201ENST00000588275 COL11A1P12107 1806 aaPredicted RBP20.21■□□□□ 0.83
LINC01842-201ENST00000588275 PARP14Q460N5 1801 aa20.21■□□□□ 0.83
LINC01842-201ENST00000588275 WDR46O15213 610 aaKnown RBP20.21■□□□□ 0.83
LINC01842-201ENST00000588275 COBLO75128 1261 aa20.21■□□□□ 0.83
LINC01842-201ENST00000588275 C16orf86Q6ZW13 317 aa20.21■□□□□ 0.83
LINC01842-201ENST00000588275 SIAH1Q8IUQ4 282 aa20.21■□□□□ 0.83
LINC01842-201ENST00000588275 LBHD1Q9BQE6 289 aaPredicted RBP20.21■□□□□ 0.83
LINC01842-201ENST00000588275 LRRCC1Q9C099 1032 aa20.21■□□□□ 0.83
LINC01842-201ENST00000588275 MROH8Q9H579 483 aa20.21■□□□□ 0.83
LINC01842-201ENST00000588275 PRKAG2Q9UGJ0 569 aa20.21■□□□□ 0.83
LINC01842-201ENST00000588275 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
LINC01842-201ENST00000588275 KBTBD13C9JR72 458 aa20.2■□□□□ 0.82
LINC01842-201ENST00000588275 EEF2P13639 858 aaKnown RBP20.2■□□□□ 0.82
LINC01842-201ENST00000588275 RTP1P59025 263 aa20.2■□□□□ 0.82
LINC01842-201ENST00000588275 UBE3CQ15386 1083 aa20.2■□□□□ 0.82
LINC01842-201ENST00000588275 ZSCAN25Q6NSZ9 544 aa20.2■□□□□ 0.82
LINC01842-201ENST00000588275 STK11IPQ8N1F8 1099 aa20.2■□□□□ 0.82
LINC01842-201ENST00000588275 PUS7LQ9H0K6 701 aaKnown RBP20.2■□□□□ 0.82
LINC01842-201ENST00000588275 ATP11BQ9Y2G3 1177 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms