RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 SMIM22K7EJ46 135 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 EIF5BO60841 1220 aaKnown RBP17.71■□□□□ 0.43
HDAC5-207ENST00000588261 HMGCRP04035 888 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 IRX3P78415 501 aaPredicted RBP17.71■□□□□ 0.43
HDAC5-207ENST00000588261 GABPAQ06546 454 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 PABPC4Q13310 644 aaKnown RBP eCLIP17.71■□□□□ 0.43
HDAC5-207ENST00000588261 MAP3K21Q5TCX8 1036 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 ANKLE1Q8NAG6 615 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 C12orf42Q96LP6 360 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 NACAP1Q9BZK3 213 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 DCP1AQ9NPI6 582 aaPredicted RBP17.71■□□□□ 0.43
HDAC5-207ENST00000588261 GINM1Q9NU53 330 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 TMOD4Q9NZQ9 345 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 HLA-DOAP06340 250 aa17.7■□□□□ 0.42
HDAC5-207ENST00000588261 ZNF589Q86UQ0 364 aaPredicted RBP17.7■□□□□ 0.42
HDAC5-207ENST00000588261 PAWRQ96IZ0 340 aaKnown RBP17.7■□□□□ 0.42
HDAC5-207ENST00000588261 ARPP21Q9UBL0 812 aaPredicted RBP17.7■□□□□ 0.42
HDAC5-207ENST00000588261 SERPINB13Q9UIV8 391 aa17.7■□□□□ 0.42
HDAC5-207ENST00000588261 LAMA3Q16787 3333 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 GSG1L2A8MUP6 293 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 CYP2D6P10635 497 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 CYP2B6P20813 491 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 ERVK-9P63128 1117 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 ERVK-24P63145 666 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 ALX1Q15699 326 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 ZYXQ15942 572 aaKnown RBP17.69■□□□□ 0.42
HDAC5-207ENST00000588261 CCL14Q16627 93 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 MORN1Q5T089 497 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 AMOTL1Q8IY63 956 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 GPRC5AQ8NFJ5 357 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 SDR42E1Q8WUS8 393 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 ESYT1Q9BSJ8 1104 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 DSCC1Q9BVC3 393 aa17.69■□□□□ 0.42
HDAC5-207ENST00000588261 A0A1W2PRG0 241 aa17.68■□□□□ 0.42
HDAC5-207ENST00000588261 PRKAB2O43741 272 aa17.68■□□□□ 0.42
HDAC5-207ENST00000588261 SBK1Q52WX2 424 aa17.68■□□□□ 0.42
HDAC5-207ENST00000588261 USP17L2Q6R6M4 530 aa17.68■□□□□ 0.42
HDAC5-207ENST00000588261 CCDC129Q6ZRS4 1044 aa17.68■□□□□ 0.42
HDAC5-207ENST00000588261 TTC6Q86TZ1 520 aa17.68■□□□□ 0.42
HDAC5-207ENST00000588261 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
HDAC5-207ENST00000588261 DLL1O00548 723 aa17.67■□□□□ 0.42
HDAC5-207ENST00000588261 EPB41L2O43491 1005 aaKnown RBP17.67■□□□□ 0.42
HDAC5-207ENST00000588261 HSPD1P10809 573 aaKnown RBP17.67■□□□□ 0.42
HDAC5-207ENST00000588261 VCAM1P19320 739 aa17.67■□□□□ 0.42
HDAC5-207ENST00000588261 KIAA1755Q5JYT7 1200 aa17.67■□□□□ 0.42
HDAC5-207ENST00000588261 GPR142Q7Z601 462 aa17.67■□□□□ 0.42
HDAC5-207ENST00000588261 IFNL3Q8IZI9 196 aa17.67■□□□□ 0.42
HDAC5-207ENST00000588261 SLC44A5Q8NCS7 719 aa17.67■□□□□ 0.42
HDAC5-207ENST00000588261 PAGR1Q9BTK6 254 aa17.67■□□□□ 0.42
HDAC5-207ENST00000588261 EPB41L4AQ9HCS5 686 aaPredicted RBP17.67■□□□□ 0.42
HDAC5-207ENST00000588261 HMX1Q9NP08 348 aaPredicted RBP17.67■□□□□ 0.42
HDAC5-207ENST00000588261 RPTORQ8N122 1335 aa17.67■□□□□ 0.42
HDAC5-207ENST00000588261 ROBO3Q96MS0 1386 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 BAZ2AQ9UIF9 1905 aaKnown RBP17.66■□□□□ 0.42
HDAC5-207ENST00000588261 FOXP2O15409 715 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 BMP8BP34820 402 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 TDO2P48775 406 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 SEPT2Q15019 361 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 RAB3GAP1Q15042 981 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 ABCB5Q2M3G0 1257 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 CERKLQ49MI3 558 aaPredicted RBP17.66■□□□□ 0.42
HDAC5-207ENST00000588261 GPR153Q6NV75 609 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 CATSPERGQ6ZRH7 1159 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 KIAA1683Q9H0B3 1180 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 NAPBQ9H115 298 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 IL25Q9H293 177 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 MCM9Q9NXL9 1143 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 FLRT1Q9NZU1 646 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 BTBD7Q9P203 1132 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 COL6A3P12111 3177 aa17.66■□□□□ 0.42
HDAC5-207ENST00000588261 APPP05067 770 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 XRCC5P13010 732 aaKnown RBP17.65■□□□□ 0.42
HDAC5-207ENST00000588261 PRKAR2AP13861 404 aaKnown RBP17.65■□□□□ 0.42
HDAC5-207ENST00000588261 CACNB2Q08289 660 aaPredicted RBP17.65■□□□□ 0.42
HDAC5-207ENST00000588261 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 CLEC10AQ8IUN9 316 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 SIAH1Q8IUQ4 282 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 NUDT12Q9BQG2 462 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 NBPF3Q9H094 633 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 OGDHLQ9ULD0 1010 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 PFASO15067 1338 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 LAMA4Q16363 1823 aa17.65■□□□□ 0.42
HDAC5-207ENST00000588261 RLFQ13129 1914 aa17.64■□□□□ 0.42
HDAC5-207ENST00000588261 SPDYE16A6NNV3 312 aaPredicted RBP17.64■□□□□ 0.41
HDAC5-207ENST00000588261 SOX1O00570 391 aaPredicted RBP17.64■□□□□ 0.41
HDAC5-207ENST00000588261 REC8O95072 547 aa17.64■□□□□ 0.41
HDAC5-207ENST00000588261 IGHA2P01877 340 aa17.64■□□□□ 0.41
HDAC5-207ENST00000588261 POLR3DP05423 398 aaPredicted RBP17.64■□□□□ 0.41
HDAC5-207ENST00000588261 CCND3P30281 292 aaPredicted RBP17.64■□□□□ 0.41
HDAC5-207ENST00000588261 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
HDAC5-207ENST00000588261 LHX8Q68G74 356 aa17.64■□□□□ 0.41
HDAC5-207ENST00000588261 CTR9Q6PD62 1173 aa17.64■□□□□ 0.41
HDAC5-207ENST00000588261 DYNLL2Q96FJ2 89 aa17.64■□□□□ 0.41
HDAC5-207ENST00000588261 CTNNA3Q9UI47 895 aa17.64■□□□□ 0.41
HDAC5-207ENST00000588261 A0A0C4DFX4 3053 aa17.64■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L15C9J2P7 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L13C9JLJ4 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L12C9JPN9 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L11C9JVI0 530 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms