RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 NR2E3Q9Y5X4 410 aa17.25■□□□□ 0.35
VMP1-206ENST00000587945 EVI5O60447 810 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 PTPREP23469 700 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 CCND3P30281 292 aaPredicted RBP17.24■□□□□ 0.35
VMP1-206ENST00000587945 AMOTL1Q8IY63 956 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 TRMT44Q8IYL2 757 aaKnown RBP17.24■□□□□ 0.35
VMP1-206ENST00000587945 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 GPATCH3Q96I76 525 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 STRBPQ96SI9 672 aaKnown RBP17.24■□□□□ 0.35
VMP1-206ENST00000587945 FLRT1Q9NZU1 646 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
VMP1-206ENST00000587945 OGDHLQ9ULD0 1010 aa17.24■□□□□ 0.35
VMP1-206ENST00000587945 NAV1Q8NEY1 1877 aa17.23■□□□□ 0.35
VMP1-206ENST00000587945 SLC15A5A6NIM6 579 aa17.23■□□□□ 0.35
VMP1-206ENST00000587945 GLRX3O76003 335 aaKnown RBP17.23■□□□□ 0.35
VMP1-206ENST00000587945 ATP2B2Q01814 1243 aa17.23■□□□□ 0.35
VMP1-206ENST00000587945 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
VMP1-206ENST00000587945 ANKLE1Q8NAG6 615 aa17.23■□□□□ 0.35
VMP1-206ENST00000587945 CCDC17Q96LX7 622 aa17.23■□□□□ 0.35
VMP1-206ENST00000587945 MOV10L1Q9BXT6 1211 aaKnown RBP17.23■□□□□ 0.35
VMP1-206ENST00000587945 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
VMP1-206ENST00000587945 HOXC10Q9NYD6 342 aa17.23■□□□□ 0.35
VMP1-206ENST00000587945 TMX2Q9Y320 296 aa17.23■□□□□ 0.35
VMP1-206ENST00000587945 CEP290O15078 2479 aa17.22■□□□□ 0.35
VMP1-206ENST00000587945 PLXNB2O15031 1838 aa17.22■□□□□ 0.35
VMP1-206ENST00000587945 EEF2P13639 858 aaKnown RBP17.22■□□□□ 0.35
VMP1-206ENST00000587945 GRB14Q14449 540 aa17.22■□□□□ 0.35
VMP1-206ENST00000587945 NPLOC4Q8TAT6 608 aa17.22■□□□□ 0.35
VMP1-206ENST00000587945 OTUD7AQ8TE49 926 aaPredicted RBP17.22■□□□□ 0.35
VMP1-206ENST00000587945 ATG4CQ96DT6 458 aa17.22■□□□□ 0.35
VMP1-206ENST00000587945 NBPF3Q9H094 633 aa17.22■□□□□ 0.35
VMP1-206ENST00000587945 VCPKMTQ9H867 229 aa17.22■□□□□ 0.35
VMP1-206ENST00000587945 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
VMP1-206ENST00000587945 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
VMP1-206ENST00000587945 FLOT1O75955 427 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 DSG3P32926 999 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 MFSD14CQ5VZR4 134 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 LHX8Q68G74 356 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 APPBP2Q92624 585 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 LPAR1Q92633 364 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.21■□□□□ 0.35
VMP1-206ENST00000587945 SPATC1LQ9H0A9 340 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 C11orf49Q9H6J7 331 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 PCDH10Q9P2E7 1040 aa17.21■□□□□ 0.35
VMP1-206ENST00000587945 MINDY4BA8MYZ0 360 aa17.2■□□□□ 0.34
VMP1-206ENST00000587945 M0R2C6 588 aa17.2■□□□□ 0.34
VMP1-206ENST00000587945 ERCC3P19447 782 aa17.2■□□□□ 0.34
VMP1-206ENST00000587945 PLS1Q14651 629 aa17.2■□□□□ 0.34
VMP1-206ENST00000587945 C7orf61Q8IZ16 206 aa17.2■□□□□ 0.34
VMP1-206ENST00000587945 PRO3102Q9H379 93 aa17.2■□□□□ 0.34
VMP1-206ENST00000587945 FBXO28Q9NVF7 368 aa17.2■□□□□ 0.34
VMP1-206ENST00000587945 ARPP21Q9UBL0 812 aaPredicted RBP17.2■□□□□ 0.34
VMP1-206ENST00000587945 GPAA1O43292 621 aa17.19■□□□□ 0.34
VMP1-206ENST00000587945 RAD21O60216 631 aa17.19■□□□□ 0.34
VMP1-206ENST00000587945 HOXC6P09630 235 aa17.19■□□□□ 0.34
VMP1-206ENST00000587945 CYP2C19P33261 490 aa17.19■□□□□ 0.34
VMP1-206ENST00000587945 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
VMP1-206ENST00000587945 SBK1Q52WX2 424 aa17.19■□□□□ 0.34
VMP1-206ENST00000587945 KANSL2Q9H9L4 492 aa17.19■□□□□ 0.34
VMP1-206ENST00000587945 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
VMP1-206ENST00000587945 ZMYND8Q9ULU4 1186 aaPredicted RBP17.19■□□□□ 0.34
VMP1-206ENST00000587945 WDR46O15213 610 aaKnown RBP17.18■□□□□ 0.34
VMP1-206ENST00000587945 ADORA2AP29274 412 aa17.18■□□□□ 0.34
VMP1-206ENST00000587945 DPP9Q86TI2 863 aa17.18■□□□□ 0.34
VMP1-206ENST00000587945 NCAPG2Q86XI2 1143 aa17.18■□□□□ 0.34
VMP1-206ENST00000587945 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
VMP1-206ENST00000587945 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
VMP1-206ENST00000587945 SEC62Q99442 399 aaKnown RBP17.18■□□□□ 0.34
VMP1-206ENST00000587945 STAP2Q9UGK3 403 aa17.18■□□□□ 0.34
VMP1-206ENST00000587945 PFASO15067 1338 aa17.18■□□□□ 0.34
VMP1-206ENST00000587945 TRIOBPQ9H2D6 2365 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 COBLO75128 1261 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 APPP05067 770 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 ZFYP08048 801 aaPredicted RBP17.17■□□□□ 0.34
VMP1-206ENST00000587945 RASA1P20936 1047 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 CNGA1P29973 690 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 RANBP2P49792 3224 aaKnown RBP17.17■□□□□ 0.34
VMP1-206ENST00000587945 TMEM132BQ14DG7 1078 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 SHCBP1Q8NEM2 672 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 TRPV1Q8NER1 839 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 CRBNQ96SW2 442 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 MKNK2Q9HBH9 465 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 TTC41PQ6P2S7 1318 aa17.17■□□□□ 0.34
VMP1-206ENST00000587945 PRDM1O75626 825 aa17.16■□□□□ 0.34
VMP1-206ENST00000587945 TDO2P48775 406 aa17.16■□□□□ 0.34
VMP1-206ENST00000587945 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
VMP1-206ENST00000587945 NUP88Q99567 741 aaPredicted RBP17.16■□□□□ 0.34
VMP1-206ENST00000587945 GOPCQ9HD26 462 aa17.16■□□□□ 0.34
VMP1-206ENST00000587945 ERC2O15083 957 aa17.15■□□□□ 0.34
VMP1-206ENST00000587945 STRNO43815 780 aa17.15■□□□□ 0.34
VMP1-206ENST00000587945 IGHA2P01877 340 aa17.15■□□□□ 0.34
VMP1-206ENST00000587945 COL6A1P12109 1028 aa17.15■□□□□ 0.34
VMP1-206ENST00000587945 SYN1P17600 705 aa17.15■□□□□ 0.34
VMP1-206ENST00000587945 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
VMP1-206ENST00000587945 MROH8Q9H579 483 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms