RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CALM1P0DP23 149 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 CALM2P0DP24 149 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 CALM3P0DP25 149 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 SSRP1Q08945 709 aaKnown RBP23.73■■□□□ 1.39
ATG4D-204ENST00000586417 MIGA2Q7L4E1 593 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 CRACR2BQ8N4Y2 399 aaPredicted RBP23.73■■□□□ 1.39
ATG4D-204ENST00000586417 SLC26A6Q9BXS9 759 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 EHD4Q9H223 541 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 MYH8P13535 1937 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 UBE2Q2LH0YL09 131 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 TSPY3P0CV98 308 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 TSPY8P0CW00 308 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 DEKP35659 375 aaKnown RBP23.73■■□□□ 1.39
ATG4D-204ENST00000586417 METTL16Q86W50 562 aaKnown RBP23.73■■□□□ 1.39
ATG4D-204ENST00000586417 SULF1Q8IWU6 871 aa23.73■■□□□ 1.39
ATG4D-204ENST00000586417 SHMT1P34896 483 aa23.72■■□□□ 1.39
ATG4D-204ENST00000586417 FUT2Q10981 343 aa23.72■■□□□ 1.39
ATG4D-204ENST00000586417 CSPP1Q1MSJ5 1256 aa23.72■■□□□ 1.39
ATG4D-204ENST00000586417 MAP1SQ66K74 1059 aaPredicted RBP23.72■■□□□ 1.39
ATG4D-204ENST00000586417 FOXP4Q8IVH2 680 aaPredicted RBP23.72■■□□□ 1.39
ATG4D-204ENST00000586417 GLIS2Q9BZE0 524 aaPredicted RBP23.72■■□□□ 1.39
ATG4D-204ENST00000586417 ELP1O95163 1332 aa23.72■■□□□ 1.39
ATG4D-204ENST00000586417 CCDC178Q5BJE1 867 aa23.71■■□□□ 1.39
ATG4D-204ENST00000586417 CMTR1Q8N1G2 835 aaKnown RBP23.71■■□□□ 1.39
ATG4D-204ENST00000586417 RBM28Q9NW13 759 aaKnown RBP23.71■■□□□ 1.39
ATG4D-204ENST00000586417 GUCY1A2P33402 732 aa23.7■■□□□ 1.39
ATG4D-204ENST00000586417 UBE2HP62256 183 aa23.7■■□□□ 1.39
ATG4D-204ENST00000586417 CAVIN1Q6NZI2 390 aaKnown RBP23.7■■□□□ 1.39
ATG4D-204ENST00000586417 NEDD1Q8NHV4 660 aa23.7■■□□□ 1.39
ATG4D-204ENST00000586417 TFIP11Q9UBB9 837 aaKnown RBP23.7■■□□□ 1.39
ATG4D-204ENST00000586417 FZD1Q9UP38 647 aa23.7■■□□□ 1.39
ATG4D-204ENST00000586417 SCAND2PQ9GZW5 306 aaPredicted RBP23.7■■□□□ 1.38
ATG4D-204ENST00000586417 SSC5DA1L4H1 1573 aa23.69■■□□□ 1.38
ATG4D-204ENST00000586417 KIF23Q02241 960 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-204ENST00000586417 RRP1BQ14684 758 aaKnown RBP23.69■■□□□ 1.38
ATG4D-204ENST00000586417 SHROOM1Q2M3G4 852 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-204ENST00000586417 KRT40Q6A162 431 aa23.69■■□□□ 1.38
ATG4D-204ENST00000586417 TMTC3Q6ZXV5 915 aa23.69■■□□□ 1.38
ATG4D-204ENST00000586417 TRIM22Q8IYM9 498 aa23.69■■□□□ 1.38
ATG4D-204ENST00000586417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.69■■□□□ 1.38
ATG4D-204ENST00000586417 RBM27Q9P2N5 1060 aaKnown RBP23.69■■□□□ 1.38
ATG4D-204ENST00000586417 PPP2R3BQ9Y5P8 575 aa23.69■■□□□ 1.38
ATG4D-204ENST00000586417 PLIN4Q96Q06 1357 aa23.69■■□□□ 1.38
ATG4D-204ENST00000586417 PLEKHA8P1O95397 391 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 CCDC82Q8N4S0 544 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 LEO1Q8WVC0 666 aaPredicted RBP23.68■■□□□ 1.38
ATG4D-204ENST00000586417 WASF1Q92558 559 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 RNF26Q9BY78 433 aaPredicted RBP23.68■■□□□ 1.38
ATG4D-204ENST00000586417 KAT14Q9H8E8 782 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 GPBP1L1Q9HC44 474 aaPredicted RBP23.68■■□□□ 1.38
ATG4D-204ENST00000586417 SWAP70Q9UH65 585 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 KIF28PB7ZC32 967 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 DEXIO95424 95 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 MAP3K10Q02779 954 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 FMR1Q06787 632 aaKnown RBP eCLIP23.68■■□□□ 1.38
ATG4D-204ENST00000586417 TATDN1Q6P1N9 297 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 LDHDQ86WU2 507 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 PNMA1Q8ND90 353 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 TRIM34Q9BYJ4 488 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 TMEM63CQ9P1W3 806 aa23.68■■□□□ 1.38
ATG4D-204ENST00000586417 HERC5Q9UII4 1024 aaKnown RBP23.68■■□□□ 1.38
ATG4D-204ENST00000586417 NOVP48745 357 aa23.67■■□□□ 1.38
ATG4D-204ENST00000586417 MAP3K14Q99558 947 aa23.67■■□□□ 1.38
ATG4D-204ENST00000586417 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.67■■□□□ 1.38
ATG4D-204ENST00000586417 MYH6P13533 1939 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 TRAF5O00463 557 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 TBC1D12O60347 775 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 AKR1B1P15121 316 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 JAG1P78504 1218 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 ATL3Q6DD88 541 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 BRAPQ7Z569 592 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 CTCFLQ8NI51 663 aaPredicted RBP23.66■■□□□ 1.38
ATG4D-204ENST00000586417 CDCA5Q96FF9 252 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 SPATA32Q96LK8 384 aa23.66■■□□□ 1.38
ATG4D-204ENST00000586417 TMEM47Q9BQJ4 181 aa23.65■■□□□ 1.38
ATG4D-204ENST00000586417 CFAP45Q9UL16 551 aa23.65■■□□□ 1.38
ATG4D-204ENST00000586417 CNTNAP5Q8WYK1 1306 aa23.65■■□□□ 1.38
ATG4D-204ENST00000586417 PRPF3O43395 683 aaKnown RBP23.65■■□□□ 1.38
ATG4D-204ENST00000586417 GDF11O95390 407 aa23.65■■□□□ 1.38
ATG4D-204ENST00000586417 PRKG1Q13976 671 aa23.65■■□□□ 1.38
ATG4D-204ENST00000586417 PKN1Q16512 942 aa23.65■■□□□ 1.38
ATG4D-204ENST00000586417 ZSCAN23Q3MJ62 389 aa23.65■■□□□ 1.38
ATG4D-204ENST00000586417 CERKLQ49MI3 558 aaPredicted RBP23.65■■□□□ 1.38
ATG4D-204ENST00000586417 SRBD1Q8N5C6 995 aaKnown RBP23.65■■□□□ 1.38
ATG4D-204ENST00000586417 USP28Q96RU2 1077 aa23.65■■□□□ 1.38
ATG4D-204ENST00000586417 FTOQ9C0B1 505 aaKnown RBP eCLIP23.65■■□□□ 1.38
ATG4D-204ENST00000586417 FSD2A1L4K1 749 aa23.64■■□□□ 1.37
ATG4D-204ENST00000586417 CEP95Q96GE4 821 aa23.64■■□□□ 1.37
ATG4D-204ENST00000586417 ZNF396Q96N95 335 aaPredicted RBP23.64■■□□□ 1.37
ATG4D-204ENST00000586417 STX8Q9UNK0 236 aa23.64■■□□□ 1.37
ATG4D-204ENST00000586417 GREB1LQ9C091 1923 aaPredicted RBP23.64■■□□□ 1.37
ATG4D-204ENST00000586417 IGKV6D-41A0A0C4DH26 115 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 PHF20L1A8MW92 1017 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 TRIM29Q14134 588 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 GRM4Q14833 912 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 SUPT20HL1Q3ZLR7 823 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 RCOR1Q9UKL0 485 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 KIF3CO14782 793 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 KIF5BP33176 963 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 MYSM1Q5VVJ2 828 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms