RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 MAPK4P31152 587 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 ERVK-24P63145 666 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 NMIQ13287 307 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 COG2Q14746 738 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 PXYLP1Q8TE99 480 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 SOCS4Q8WXH5 440 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 ZNF333Q96JL9 665 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 FAM227BQ96M60 508 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 RLFQ13129 1914 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 A0A0G2JMZ2 1700 aa12.37□□□□□ -0.43
SMARCA4-209ENST00000586122 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 FOXP2O15409 715 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 TSPY3P0CV98 308 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 TSPY8P0CW00 308 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 HSPD1P10809 573 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 CAPN2P17655 700 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 GRK4P32298 578 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 PRKCZQ05513 592 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 TTC22Q5TAA0 569 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 CCAR1Q8IX12 1150 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 NEDD1Q8NHV4 660 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 TANGO6Q9C0B7 1094 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 RBPJLQ9UBG7 517 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 RAD50Q92878 1312 aa12.36□□□□□ -0.43
SMARCA4-209ENST00000586122 HTTP42858 3142 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 IGKV6D-41A0A0C4DH26 115 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 SPDYE16A6NNV3 312 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 ORC4O43929 436 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 TTLL1O95922 423 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 PDE4AP27815 886 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 FLT3LGP49771 235 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 SOX10P56693 466 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 UBXN2AP68543 259 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 ATP2B2Q01814 1243 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 MLLT1Q03111 559 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 VPS53Q5VIR6 699 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 PAGR1Q9BTK6 254 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 TXNRD2Q9NNW7 524 aa12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMARCA4-209ENST00000586122 PDE4DIPQ5VU43 2346 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 PRDM1O75626 825 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 FLOT1O75955 427 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 FGAP02671 866 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 FGRP09769 529 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 CWC27Q6UX04 472 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 CENPQQ7L2Z9 268 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 ZNF589Q86UQ0 364 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 CLEC10AQ8IUN9 316 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 TRMT44Q8IYL2 757 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 RUFY2Q8WXA3 655 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 MKL1Q969V6 931 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 DSCC1Q9BVC3 393 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 MTMR4Q9NYA4 1195 aa12.34□□□□□ -0.43
SMARCA4-209ENST00000586122 PLXNB2O15031 1838 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 ADCY3O60266 1144 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 XRCC5P13010 732 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 DSG3P32926 999 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 TFAP4Q01664 338 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 STK11IPQ8N1F8 1099 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 SHCBP1Q8NEM2 672 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 SH3TC2Q8TF17 1288 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 CEP95Q96GE4 821 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 CTNNA3Q9UI47 895 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 GABRQQ9UN88 632 aa12.33□□□□□ -0.44
SMARCA4-209ENST00000586122 ZNF236Q9UL36 1845 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 F5H6K3 240 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 CNMDO75829 334 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 GSPT1P15170 499 aaKnown RBP12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 COPB2P35606 906 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 RGS2P41220 211 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 KLRC3Q07444 240 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 GPR142Q7Z601 462 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 PLEKHH3Q7Z736 793 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 BIN2Q9UBW5 565 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 GJD2Q9UKL4 321 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 ADAMTS5Q9UNA0 930 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 IVNS1ABPQ9Y6Y0 642 aa12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-209ENST00000586122 ZNF213O14771 459 aa12.31□□□□□ -0.44
SMARCA4-209ENST00000586122 STRNO43815 780 aa12.31□□□□□ -0.44
SMARCA4-209ENST00000586122 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-209ENST00000586122 NDUFB10O96000 172 aa12.31□□□□□ -0.44
SMARCA4-209ENST00000586122 HMGCRP04035 888 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms