RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 GTF3C2Q8WUA4 911 aaPredicted RBP21.57■■□□□ 1.04
SRSF1-208ENST00000584773 TANGO6Q9C0B7 1094 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 ARHGEF10LQ9HCE6 1279 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 STAP2Q9UGK3 403 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 TMX2Q9Y320 296 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 RABGAP1Q9Y3P9 1069 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 SUPT16HQ9Y5B9 1047 aaKnown RBP21.57■■□□□ 1.04
SRSF1-208ENST00000584773 PARP14Q460N5 1801 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 ROBO3Q96MS0 1386 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 GJA8P48165 433 aa21.56■■□□□ 1.04
SRSF1-208ENST00000584773 GIMAP6Q6P9H5 292 aa21.56■■□□□ 1.04
SRSF1-208ENST00000584773 IFNL3Q8IZI9 196 aa21.56■■□□□ 1.04
SRSF1-208ENST00000584773 TRIB2Q92519 343 aa21.56■■□□□ 1.04
SRSF1-208ENST00000584773 A0A0G2JMZ2 1700 aa21.56■■□□□ 1.04
SRSF1-208ENST00000584773 PATL2C9JE40 543 aaKnown RBP21.55■■□□□ 1.04
SRSF1-208ENST00000584773 FOXP2O15409 715 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 PRDM1O75626 825 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 MAPK4P31152 587 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 SAMD1Q6SPF0 538 aaPredicted RBP21.55■■□□□ 1.04
SRSF1-208ENST00000584773 CCAR1Q8IX12 1150 aaKnown RBP21.55■■□□□ 1.04
SRSF1-208ENST00000584773 SMC5Q8IY18 1101 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 U2AF1L4Q8WU68 220 aaKnown RBP21.55■■□□□ 1.04
SRSF1-208ENST00000584773 VCPKMTQ9H867 229 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 GNAT2P19087 354 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 CCL14Q16627 93 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 LRRFIP1Q32MZ4 808 aaKnown RBP21.55■■□□□ 1.04
SRSF1-208ENST00000584773 WDR78Q5VTH9 848 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 LBX2Q6XYB7 198 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 PLEKHH3Q7Z736 793 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 DEFB118Q96PH6 123 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 NUDT12Q9BQG2 462 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 MKNK2Q9HBH9 465 aa21.55■■□□□ 1.04
SRSF1-208ENST00000584773 HMGCRP04035 888 aa21.54■■□□□ 1.04
SRSF1-208ENST00000584773 MORN1Q5T089 497 aa21.54■■□□□ 1.04
SRSF1-208ENST00000584773 USP6NLQ92738 828 aa21.54■■□□□ 1.04
SRSF1-208ENST00000584773 RWDD1Q9H446 243 aaPredicted RBP21.54■■□□□ 1.04
SRSF1-208ENST00000584773 COL11A1P12107 1806 aaPredicted RBP21.53■■□□□ 1.04
SRSF1-208ENST00000584773 RAD21O60216 631 aa21.53■■□□□ 1.04
SRSF1-208ENST00000584773 IRX6P78412 446 aaPredicted RBP21.53■■□□□ 1.04
SRSF1-208ENST00000584773 COG2Q14746 738 aa21.53■■□□□ 1.04
SRSF1-208ENST00000584773 VPS53Q5VIR6 699 aa21.53■■□□□ 1.04
SRSF1-208ENST00000584773 SOCS4Q8WXH5 440 aa21.53■■□□□ 1.04
SRSF1-208ENST00000584773 EVI5LQ96CN4 794 aa21.53■■□□□ 1.04
SRSF1-208ENST00000584773 ATG4CQ96DT6 458 aa21.53■■□□□ 1.04
SRSF1-208ENST00000584773 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.53■■□□□ 1.04
SRSF1-208ENST00000584773 KANSL2Q9H9L4 492 aa21.53■■□□□ 1.04
SRSF1-208ENST00000584773 CWC22Q9HCG8 908 aaKnown RBP21.53■■□□□ 1.04
SRSF1-208ENST00000584773 PAK6Q9NQU5 681 aaPredicted RBP21.53■■□□□ 1.04
SRSF1-208ENST00000584773 FBXO28Q9NVF7 368 aa21.53■■□□□ 1.04
SRSF1-208ENST00000584773 MYH4Q9Y623 1939 aa21.52■■□□□ 1.04
SRSF1-208ENST00000584773 FLOT1O75955 427 aa21.52■■□□□ 1.03
SRSF1-208ENST00000584773 SGPL1O95470 568 aa21.52■■□□□ 1.03
SRSF1-208ENST00000584773 AAMPQ13685 434 aa21.52■■□□□ 1.03
SRSF1-208ENST00000584773 NKX2-3Q8TAU0 364 aa21.52■■□□□ 1.03
SRSF1-208ENST00000584773 LPAR1Q92633 364 aa21.52■■□□□ 1.03
SRSF1-208ENST00000584773 FAM227BQ96M60 508 aa21.52■■□□□ 1.03
SRSF1-208ENST00000584773 SH2D4AQ9H788 454 aa21.52■■□□□ 1.03
SRSF1-208ENST00000584773 DSG3P32926 999 aa21.51■■□□□ 1.03
SRSF1-208ENST00000584773 UBE2Q1Q7Z7E8 422 aa21.51■■□□□ 1.03
SRSF1-208ENST00000584773 NUP88Q99567 741 aaPredicted RBP21.51■■□□□ 1.03
SRSF1-208ENST00000584773 MOV10L1Q9BXT6 1211 aaKnown RBP21.51■■□□□ 1.03
SRSF1-208ENST00000584773 NAPBQ9H115 298 aa21.51■■□□□ 1.03
SRSF1-208ENST00000584773 A0A0D9SFI3 127 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 WDR46O15213 610 aaKnown RBP21.5■■□□□ 1.03
SRSF1-208ENST00000584773 RGS2P41220 211 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 CCNA1P78396 465 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 PPARAQ07869 468 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 FAM83BQ5T0W9 1011 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 CHD1LQ86WJ1 897 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 NACAP1Q9BZK3 213 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 INCENPQ9NQS7 918 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 HOXC10Q9NYD6 342 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 FLRT1Q9NZU1 646 aa21.5■■□□□ 1.03
SRSF1-208ENST00000584773 IGKV6D-41A0A0C4DH26 115 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 FARP2O94887 1054 aaPredicted RBP21.49■■□□□ 1.03
SRSF1-208ENST00000584773 TFRCP02786 760 aaKnown RBP21.49■■□□□ 1.03
SRSF1-208ENST00000584773 XRCC5P13010 732 aaKnown RBP21.49■■□□□ 1.03
SRSF1-208ENST00000584773 PRKAR2AP13861 404 aaKnown RBP21.49■■□□□ 1.03
SRSF1-208ENST00000584773 ZKSCAN1P17029 563 aaPredicted RBP21.49■■□□□ 1.03
SRSF1-208ENST00000584773 PTPREP23469 700 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 NUCB1Q02818 461 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 MAP2K5Q13163 448 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 FAM47AQ5JRC9 791 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 PLEKHM2Q8IWE5 1019 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 APBA2Q99767 749 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 SPATC1LQ9H0A9 340 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 TACC3Q9Y6A5 838 aa21.49■■□□□ 1.03
SRSF1-208ENST00000584773 TRIM6-TRIM34B2RNG4 842 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 CTDSPL2Q05D32 466 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 PLS1Q14651 629 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 MAP3K21Q5TCX8 1036 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 ZNF444Q8N0Y2 327 aaPredicted RBP21.48■■□□□ 1.03
SRSF1-208ENST00000584773 NPLOC4Q8TAT6 608 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 DIS3LQ8TF46 1054 aaKnown RBP21.48■■□□□ 1.03
SRSF1-208ENST00000584773 RILPL2Q969X0 211 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 CEP95Q96GE4 821 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 CRISPLD2Q9H0B8 497 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 GOPCQ9HD26 462 aa21.48■■□□□ 1.03
SRSF1-208ENST00000584773 HMX1Q9NP08 348 aaPredicted RBP21.48■■□□□ 1.03
SRSF1-208ENST00000584773 CLIP2Q9UDT6 1046 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms