RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 ZSCAN10Q96SZ4 725 aaPredicted RBP7.82□□□□□ -1.16
CDH8-212ENST00000584506 TRIM34Q9BYJ4 488 aa7.82□□□□□ -1.16
CDH8-212ENST00000584506 OSBPL5Q9H0X9 879 aaPredicted RBP7.82□□□□□ -1.16
CDH8-212ENST00000584506 EHD4Q9H223 541 aa7.82□□□□□ -1.16
CDH8-212ENST00000584506 TDRD3Q9H7E2 651 aaKnown RBP7.82□□□□□ -1.16
CDH8-212ENST00000584506 LY9Q9HBG7 655 aa7.82□□□□□ -1.16
CDH8-212ENST00000584506 TCP11L1Q9NUJ3 509 aa7.82□□□□□ -1.16
CDH8-212ENST00000584506 SLC12A7Q9Y666 1083 aa7.82□□□□□ -1.16
CDH8-212ENST00000584506 TACC3Q9Y6A5 838 aa7.82□□□□□ -1.16
CDH8-212ENST00000584506 MYH4Q9Y623 1939 aa7.82□□□□□ -1.16
CDH8-212ENST00000584506 COL2A1P02458 1487 aaPredicted RBP7.81□□□□□ -1.16
CDH8-212ENST00000584506 TNKSO95271 1327 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 WDR33Q9C0J8 1336 aaKnown RBP7.81□□□□□ -1.16
CDH8-212ENST00000584506 SOWAHBA6NEL2 793 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 GOLGA8BA8MQT2 603 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 H7C1D1 291 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 GJB2P29033 226 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 TNNI2P48788 182 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 METAP2P50579 478 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDH8-212ENST00000584506 CCT2P78371 535 aaKnown RBP7.81□□□□□ -1.16
CDH8-212ENST00000584506 SCRN1Q12765 414 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 PTGDRQ13258 359 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 SEC23AQ15436 765 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 APOA5Q6Q788 366 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 CATIPQ7Z7H3 387 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 DGKHQ86XP1 1220 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 FAM184AQ8NB25 1140 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 DYNLL2Q96FJ2 89 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 CCDC17Q96LX7 622 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 GBP4Q96PP9 640 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 ZKSCAN3Q9BRR0 538 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 MYOZ2Q9NPC6 264 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 DDX4Q9NQI0 724 aaKnown RBP7.81□□□□□ -1.16
CDH8-212ENST00000584506 RBM27Q9P2N5 1060 aaKnown RBP7.81□□□□□ -1.16
CDH8-212ENST00000584506 PI4KBQ9UBF8 816 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 SERPINB13Q9UIV8 391 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 BRPF3Q9ULD4 1205 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 GJA3Q9Y6H8 435 aa7.81□□□□□ -1.16
CDH8-212ENST00000584506 TCHHQ07283 1943 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 SMIM22K7EJ46 135 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 SMAPO00193 183 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 RASA1P20936 1047 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 GMPSP49915 693 aaPredicted RBP7.8□□□□□ -1.16
CDH8-212ENST00000584506 ZNF280AP59817 542 aaPredicted RBP7.8□□□□□ -1.16
CDH8-212ENST00000584506 GABPAQ06546 454 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 TCP10Q12799 353 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 NFIAQ12857 509 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 TNFAIP1Q13829 316 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 RAB3GAP1Q15042 981 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 SLC4A8Q2Y0W8 1093 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 FAM47AQ5JRC9 791 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 RBM26Q5T8P6 1007 aaKnown RBP7.8□□□□□ -1.16
CDH8-212ENST00000584506 FAM83AQ86UY5 434 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 ZNF654Q8IZM8 581 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 GPC2Q8N158 579 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 CRACR2BQ8N4Y2 399 aaPredicted RBP7.8□□□□□ -1.16
CDH8-212ENST00000584506 ENAHQ8N8S7 591 aaPredicted RBP7.8□□□□□ -1.16
CDH8-212ENST00000584506 NEDD1Q8NHV4 660 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 SMARCC2Q8TAQ2 1214 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 FAM151AQ8WW52 585 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 ANKS1AQ92625 1134 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 ZNF70Q9UC06 446 aaPredicted RBP7.8□□□□□ -1.16
CDH8-212ENST00000584506 CNOT7Q9UIV1 285 aaKnown RBP7.8□□□□□ -1.16
CDH8-212ENST00000584506 SIPA1L1O43166 1804 aa7.8□□□□□ -1.16
CDH8-212ENST00000584506 GOLGA8AA7E2F4 631 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 STX6O43752 255 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 GRIN3BO60391 1043 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 RGS20O76081 388 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 DDAH1O94760 285 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 SYT1P21579 422 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 CACNB3P54284 484 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 ST3GAL1Q11201 340 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 GPR162Q16538 588 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 RTN1Q16799 776 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 LARP1BQ659C4 914 aaKnown RBP7.79□□□□□ -1.16
CDH8-212ENST00000584506 MICU3Q86XE3 530 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 FANCBQ8NB91 859 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 RGS22Q8NE09 1264 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 NSUN7Q8NE18 718 aaKnown RBP7.79□□□□□ -1.16
CDH8-212ENST00000584506 CTCFLQ8NI51 663 aaPredicted RBP7.79□□□□□ -1.16
CDH8-212ENST00000584506 WASF1Q92558 559 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 TATDN2Q93075 761 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 ZBED3Q96IU2 234 aaPredicted RBP7.79□□□□□ -1.16
CDH8-212ENST00000584506 MAP3K14Q99558 947 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 KAT14Q9H8E8 782 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 RBM28Q9NW13 759 aaKnown RBP7.79□□□□□ -1.16
CDH8-212ENST00000584506 HERC5Q9UII4 1024 aaKnown RBP7.79□□□□□ -1.16
CDH8-212ENST00000584506 PNMA3Q9UL41 463 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 HPS5Q9UPZ3 1129 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 PCDHAC2Q9Y5I4 1007 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 ATP6V1DQ9Y5K8 247 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 NID2Q14112 1375 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 ATRNL1Q5VV63 1379 aa7.79□□□□□ -1.16
CDH8-212ENST00000584506 POLR2AP24928 1970 aaKnown RBP7.79□□□□□ -1.16
CDH8-212ENST00000584506 GREB1LQ9C091 1923 aaPredicted RBP7.78□□□□□ -1.16
CDH8-212ENST00000584506 MYH15Q9Y2K3 1946 aa7.78□□□□□ -1.16
CDH8-212ENST00000584506 CLRN2A0PK11 232 aa7.78□□□□□ -1.16
CDH8-212ENST00000584506 PTPDC1A2A3K4 754 aa7.78□□□□□ -1.16
CDH8-212ENST00000584506 DDTLA6NHG4 134 aaPredicted RBP7.78□□□□□ -1.16
CDH8-212ENST00000584506 TCP10L2B9ZVM9 353 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms