RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SNIP1Q8TAD8 396 aaKnown RBP6.61□□□□□ -1.35
VAPA-207ENST00000583879 SSH1Q8WYL5 1049 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 TBC1D2Q9BYX2 928 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 OSBPL5Q9H0X9 879 aaPredicted RBP6.61□□□□□ -1.35
VAPA-207ENST00000583879 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.61□□□□□ -1.35
VAPA-207ENST00000583879 SENP2Q9HC62 589 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 ATP13A2Q9NQ11 1180 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 PRDM9Q9NQV7 894 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.61□□□□□ -1.35
VAPA-207ENST00000583879 OGDHLQ9ULD0 1010 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 ZMYND8Q9ULU4 1186 aaPredicted RBP6.61□□□□□ -1.35
VAPA-207ENST00000583879 HDAC5Q9UQL6 1122 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 ZSWIM8A7E2V4 1837 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 A0A1B0GUL6 1792 aa6.61□□□□□ -1.35
VAPA-207ENST00000583879 RANBP2P49792 3224 aaKnown RBP6.61□□□□□ -1.35
VAPA-207ENST00000583879 ZNF521Q96K83 1311 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 USP17L5A8MUK1 530 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 MAP4K4O95819 1239 aaPredicted RBP6.6□□□□□ -1.35
VAPA-207ENST00000583879 HMGCRP04035 888 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 UBTFL1P0CB47 393 aaPredicted RBP6.6□□□□□ -1.35
VAPA-207ENST00000583879 ADORA1P30542 326 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 CAP2P40123 477 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 GCGRP47871 477 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 RHBDL3P58872 404 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 PABPC4Q13310 644 aaKnown RBP eCLIP6.6□□□□□ -1.35
VAPA-207ENST00000583879 MSS51Q4VC12 460 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 SH3D19Q5HYK7 790 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 BRICD5Q6PL45 260 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.6□□□□□ -1.35
VAPA-207ENST00000583879 C7orf61Q8IZ16 206 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 TDHQ8IZJ6 230 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 ZNF280CQ8ND82 737 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 C11orf49Q9H6J7 331 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 COPRSQ9NQ92 184 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 MTMR10Q9NXD2 777 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 STXBP5LQ9Y2K9 1186 aa6.6□□□□□ -1.35
VAPA-207ENST00000583879 MROH7-TTC4A0A0A0MT08 1334 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 PDS5AQ29RF7 1337 aaKnown RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 LDHCP07864 332 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 XRCC5P13010 732 aaKnown RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 SMPD1P17405 629 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 SYN1P17600 705 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 CYP2B6P20813 491 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 FECHP22830 423 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 HOXA7P31268 230 aaPredicted RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 MAGEA10P43363 369 aaPredicted RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 HMGCS2P54868 508 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 MECOMQ03112 1051 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 TRIM32Q13049 653 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 RASGRF1Q13972 1273 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 RRP1BQ14684 758 aaKnown RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 ALDH1L2Q3SY69 923 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 MAP3K21Q5TCX8 1036 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 Q7L0L9 218 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 ZNF384Q8TF68 577 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 TRIB2Q92519 343 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 XAGE2Q96GT9 111 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 UBE2OQ9C0C9 1292 aaKnown RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 ASCC2Q9H1I8 757 aaPredicted RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 AS3MTQ9HBK9 375 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 MORF4L1Q9UBU8 362 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 PA2G4Q9UQ80 394 aaKnown RBP6.59□□□□□ -1.35
VAPA-207ENST00000583879 AKAP2Q9Y2D5 859 aa6.59□□□□□ -1.35
VAPA-207ENST00000583879 CACNA1FO60840 1977 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 RFX7Q2KHR2 1363 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 A0A1B0GUL7 405 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 FAM196BA6NMK8 535 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 E9PSI1 815 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 GPR37O15354 613 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 COL6A1P12109 1028 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 SNRPBP14678 240 aaKnown RBP6.58□□□□□ -1.36
VAPA-207ENST00000583879 BACE1P56817 501 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 GSTO1P78417 241 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 MVPQ14764 893 aaKnown RBP6.58□□□□□ -1.36
VAPA-207ENST00000583879 Q3C1V9 767 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 TRMT44Q8IYL2 757 aaKnown RBP6.58□□□□□ -1.36
VAPA-207ENST00000583879 GPRC5AQ8NFJ5 357 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 NSUN4Q96CB9 384 aaKnown RBP6.58□□□□□ -1.36
VAPA-207ENST00000583879 NEUROD6Q96NK8 337 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 P2RX7Q99572 595 aaKnown RBP6.58□□□□□ -1.36
VAPA-207ENST00000583879 NUDT12Q9BQG2 462 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 WDR18Q9BV38 432 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 PI4KBQ9UBF8 816 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 HERC5Q9UII4 1024 aaKnown RBP6.58□□□□□ -1.36
VAPA-207ENST00000583879 COL6A3P12111 3177 aa6.58□□□□□ -1.36
VAPA-207ENST00000583879 TRIOBPQ9H2D6 2365 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 C19orf81C9J6K1 198 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 USP17L10C9JJH3 530 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 ASNSP08243 561 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 IRX3P78415 501 aaPredicted RBP6.57□□□□□ -1.36
VAPA-207ENST00000583879 CACNB2Q08289 660 aaPredicted RBP6.57□□□□□ -1.36
VAPA-207ENST00000583879 SLFN5Q08AF3 891 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 TFCP2Q12800 502 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 RNF19BQ6ZMZ0 732 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 TBC1D9Q6ZT07 1266 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 FOXP4Q8IVH2 680 aaPredicted RBP6.57□□□□□ -1.36
VAPA-207ENST00000583879 SPATA5Q8NB90 893 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 SOCS4Q8WXH5 440 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 USP6NLQ92738 828 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms