RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TEX11Q8IYF3 940 aa9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 SH3RF3Q8TEJ3 882 aaPredicted RBP9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 PAWRQ96IZ0 340 aaKnown RBP9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 ASCC2Q9H1I8 757 aaPredicted RBP9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 USP17L5A8MUK1 530 aa9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 SOX1O00570 391 aaPredicted RBP9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 PEX10O60683 326 aa9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 HMGCRP04035 888 aa9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 GCLCP48506 637 aaPredicted RBP9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 PPP4CP60510 307 aa9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 POM121Q96HA1 1249 aa9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 AS3MTQ9HBK9 375 aa9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 AATFQ9NY61 560 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 STAP2Q9UGK3 403 aa9.58□□□□□ -0.88
SMCHD1-210ENST00000583800 LAMA3Q16787 3333 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 MAP4K4O95819 1239 aaPredicted RBP9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 TRIM27P14373 513 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 JAG1P78504 1218 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 PABPC4Q13310 644 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 MTMR2Q13614 643 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 SHROOM1Q2M3G4 852 aaPredicted RBP9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 NECAB2Q7Z6G3 386 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 ADGRA1Q86SQ6 560 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 MAPKAPK5Q8IW41 473 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 C7orf61Q8IZ16 206 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 TRIB2Q92519 343 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 ARHGAP45Q92619 1136 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 REPIN1Q9BWE0 567 aaKnown RBP9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 TBC1D2Q9BYX2 928 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 DNAJC18Q9H819 358 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 SNRKQ9NRH2 765 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 LRP2BPQ9P2M1 347 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 HERC5Q9UII4 1024 aaKnown RBP9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 GJD2Q9UKL4 321 aa9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 ZMYND8Q9ULU4 1186 aaPredicted RBP9.57□□□□□ -0.88
SMCHD1-210ENST00000583800 FLT1P17948 1338 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 NAV1Q8NEY1 1877 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 A0A1W2PPC1 479 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 GDF11O95390 407 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 GNAI2P04899 355 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 UQCRFS1P1P0C7P4 283 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 CYP2B6P20813 491 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 IRX3P78415 501 aaPredicted RBP9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 G3BP1Q13283 466 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 NAA16Q6N069 864 aaPredicted RBP9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 TGFBRAP1Q8WUH2 860 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 FRAT1Q92837 279 aaPredicted RBP9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 DBNDD2Q9BQY9 259 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 NOL10Q9BSC4 688 aaKnown RBP9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 TXNRD2Q9NNW7 524 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 HMX1Q9NP08 348 aaPredicted RBP9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 PI4KBQ9UBF8 816 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 MORF4L1Q9UBU8 362 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 RPTORQ8N122 1335 aa9.56□□□□□ -0.88
SMCHD1-210ENST00000583800 BCAR3O75815 825 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 SYN1P17600 705 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 CAPN2P17655 700 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 BACE1P56817 501 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 SKIV2LQ15477 1246 aaKnown RBP9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 TNNI3KQ59H18 835 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 TTC39AQ5SRH9 613 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 PPP1R18Q6NYC8 613 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 ATF7IPQ6VMQ6 1270 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 PACS2Q86VP3 889 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 ANKLE1Q8NAG6 615 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 P2RX7Q99572 595 aaKnown RBP9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 WDR18Q9BV38 432 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 DHX36Q9H2U1 1008 aaKnown RBP9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 TMOD4Q9NZQ9 345 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 FPGT-TNNI3KV9GXZ4 949 aa9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
SMCHD1-210ENST00000583800 MYH8P13535 1937 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 BAG3O95817 575 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 CYP2E1P05181 493 aaPredicted RBP9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 ASNSP08243 561 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 HERVK_113P62684 666 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 TMCO4Q5TGY1 634 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 CRACR2BQ8N4Y2 399 aaPredicted RBP9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 GDF15Q99988 308 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 NUDT12Q9BQG2 462 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 TMUB1Q9BVT8 246 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 C11orf49Q9H6J7 331 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 SAP30BPQ9UHR5 308 aaKnown RBP9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 PALD1Q9ULE6 856 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 ZBTB21Q9ULJ3 1066 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 MTMR7Q9Y216 660 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 PFASO15067 1338 aa9.54□□□□□ -0.88
SMCHD1-210ENST00000583800 C19orf81C9J6K1 198 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 USP17L10C9JJH3 530 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 IPO8O15397 1037 aaKnown RBP9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 ZKSCAN1P17029 563 aaPredicted RBP9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 HOXA7P31268 230 aaPredicted RBP9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 ZAP70P43403 619 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 ERVK-9P63128 1117 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 ERVK-24P63145 666 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 DYNLL1P63167 89 aaKnown RBP9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 OS9Q13438 667 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms