RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
TOP3A-215ENST00000583328 POLR3DP05423 398 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-215ENST00000583328 GUCY1A2P33402 732 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 SHMT1P34896 483 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 PLCD1P51178 756 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 TLE2Q04725 743 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 PLS1Q14651 629 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 SEPT2Q15019 361 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 C1orf53Q5VUE5 145 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 SHCBP1Q8NEM2 672 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 TANGO6Q9C0B7 1094 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 CCDC8Q9H0W5 538 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-215ENST00000583328 TACC3Q9Y6A5 838 aa14.97□□□□□ -0.01
TOP3A-215ENST00000583328 TMEM265A0A087WTH1 108 aa14.96□□□□□ -0.01
TOP3A-215ENST00000583328 TRIM27P14373 513 aa14.96□□□□□ -0.01
TOP3A-215ENST00000583328 POLA2Q14181 598 aa14.96□□□□□ -0.01
TOP3A-215ENST00000583328 FAM47AQ5JRC9 791 aa14.96□□□□□ -0.01
TOP3A-215ENST00000583328 NCAPG2Q86XI2 1143 aa14.96□□□□□ -0.01
TOP3A-215ENST00000583328 FRAT1Q92837 279 aaPredicted RBP14.96□□□□□ -0.01
TOP3A-215ENST00000583328 CLUAP1Q96AJ1 413 aa14.96□□□□□ -0.01
TOP3A-215ENST00000583328 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
TOP3A-215ENST00000583328 A0A1W2PRG0 241 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 CLTBP09497 229 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 RAG1P15918 1043 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 DSG3P32926 999 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 ATP8B2P98198 1209 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 MAP3K12Q12852 859 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 ABRAQ8N0Z2 381 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 MB21D1Q8N884 522 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 MROH8Q9H579 483 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 DBNLQ9UJU6 430 aaKnown RBP14.95□□□□□ -0.02
TOP3A-215ENST00000583328 MAST2Q6P0Q8 1798 aa14.95□□□□□ -0.02
TOP3A-215ENST00000583328 BCAR3O75815 825 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 RARBP10826 455 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 FCER1AP12319 257 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 ITGB8P26012 769 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
TOP3A-215ENST00000583328 RNF180Q86T96 592 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 SSH3Q8TE77 659 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 MAML3Q96JK9 1138 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 XPNPEP3Q9NQH7 507 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 TLR7Q9NYK1 1049 aaKnown RBP14.94□□□□□ -0.02
TOP3A-215ENST00000583328 PHF24Q9UPV7 400 aa14.94□□□□□ -0.02
TOP3A-215ENST00000583328 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-215ENST00000583328 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-215ENST00000583328 PQBP1O60828 265 aaKnown RBP14.93□□□□□ -0.02
TOP3A-215ENST00000583328 FLOT1O75955 427 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 EPHB4P54760 987 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 GABPAQ06546 454 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 GRIN2CQ14957 1233 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 TJAP1Q5JTD0 557 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 EAF2Q96CJ1 260 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-215ENST00000583328 ATG4CQ96DT6 458 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 ANTXR1Q9H6X2 564 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 TMEM39AQ9NV64 488 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 MCM9Q9NXL9 1143 aa14.93□□□□□ -0.02
TOP3A-215ENST00000583328 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
TOP3A-215ENST00000583328 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
TOP3A-215ENST00000583328 PGK1P00558 417 aa14.92□□□□□ -0.02
TOP3A-215ENST00000583328 FPGSQ05932 587 aa14.92□□□□□ -0.02
TOP3A-215ENST00000583328 TMED8Q6PL24 325 aaPredicted RBP14.92□□□□□ -0.02
TOP3A-215ENST00000583328 RIOK1Q9BRS2 568 aaKnown RBP14.92□□□□□ -0.02
TOP3A-215ENST00000583328 NRBP1Q9UHY1 535 aa14.92□□□□□ -0.02
TOP3A-215ENST00000583328 FRMPD3Q5JV73 1810 aa14.92□□□□□ -0.02
TOP3A-215ENST00000583328 TNFRSF10AO00220 468 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 SLC25A27O95847 323 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 COL9A1P20849 921 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 DNAJB2P25686 324 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 HNRNPUQ00839 825 aaKnown RBP eCLIP14.91□□□□□ -0.02
TOP3A-215ENST00000583328 KIAA1755Q5JYT7 1200 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 TMEM179Q6ZVK1 233 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 SPICE1Q8N0Z3 855 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 TMEM57Q8N5G2 664 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 USP38Q8NB14 1042 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 MMP19Q99542 508 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 CRNKL1Q9BZJ0 848 aaKnown RBP14.91□□□□□ -0.02
TOP3A-215ENST00000583328 ARHGEF10LQ9HCE6 1279 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 NOP58Q9Y2X3 529 aaKnown RBP14.91□□□□□ -0.02
TOP3A-215ENST00000583328 TTC28Q96AY4 2481 aa14.91□□□□□ -0.02
TOP3A-215ENST00000583328 LTBP2Q14767 1821 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 A0A1W2PQ45 241 aaPredicted RBP14.9□□□□□ -0.02
TOP3A-215ENST00000583328 A0A1W2PQY0 241 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 DCDC2CA8MYV0 355 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 EVX2Q03828 476 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 PPM1EQ8WY54 764 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 TIFAQ96CG3 184 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 ZNF576Q9H609 170 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 C1orf115Q9H7X2 142 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 RLFQ13129 1914 aa14.9□□□□□ -0.02
TOP3A-215ENST00000583328 PGK2P07205 417 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 TAL1P17542 331 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-215ENST00000583328 KCTD2Q14681 263 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 TMEM132BQ14DG7 1078 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 SLC44A5Q8NCS7 719 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 TINF2Q9BSI4 451 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 SH2D4AQ9H788 454 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 VCPKMTQ9H867 229 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 STARD7Q9NQZ5 370 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 SWAP70Q9UH65 585 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 TMX2Q9Y320 296 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms