RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 TANGO6Q9C0B7 1094 aa19.63■□□□□ 0.73
SREBF1-221ENST00000583080 UNC80Q8N2C7 3258 aa19.63■□□□□ 0.73
SREBF1-221ENST00000583080 POTEB2H3BUK9 544 aa19.62■□□□□ 0.73
SREBF1-221ENST00000583080 MPHOSPH10O00566 681 aaKnown RBP19.62■□□□□ 0.73
SREBF1-221ENST00000583080 CYP2D6P10635 497 aa19.62■□□□□ 0.73
SREBF1-221ENST00000583080 PDE6AP16499 860 aa19.62■□□□□ 0.73
SREBF1-221ENST00000583080 SLC44A5Q8NCS7 719 aa19.62■□□□□ 0.73
SREBF1-221ENST00000583080 IL1RAPL2Q9NP60 686 aa19.62■□□□□ 0.73
SREBF1-221ENST00000583080 MCM9Q9NXL9 1143 aa19.62■□□□□ 0.73
SREBF1-221ENST00000583080 ERCC3P19447 782 aa19.61■□□□□ 0.73
SREBF1-221ENST00000583080 DPP9Q86TI2 863 aa19.61■□□□□ 0.73
SREBF1-221ENST00000583080 SDR42E1Q8WUS8 393 aa19.61■□□□□ 0.73
SREBF1-221ENST00000583080 SPATC1LQ9H0A9 340 aa19.61■□□□□ 0.73
SREBF1-221ENST00000583080 ATP11BQ9Y2G3 1177 aa19.61■□□□□ 0.73
SREBF1-221ENST00000583080 LAMA2P24043 3122 aaKnown RBP19.61■□□□□ 0.73
SREBF1-221ENST00000583080 COBLO75128 1261 aa19.6■□□□□ 0.73
SREBF1-221ENST00000583080 COG2Q14746 738 aa19.6■□□□□ 0.73
SREBF1-221ENST00000583080 SLC9C2Q5TAH2 1124 aa19.6■□□□□ 0.73
SREBF1-221ENST00000583080 OLFML2BQ68BL8 750 aa19.6■□□□□ 0.73
SREBF1-221ENST00000583080 FAM109BQ6ICB4 259 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-221ENST00000583080 TMED8Q6PL24 325 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-221ENST00000583080 LCORLQ8N3X6 602 aa19.6■□□□□ 0.73
SREBF1-221ENST00000583080 CRNKL1Q9BZJ0 848 aaKnown RBP19.6■□□□□ 0.73
SREBF1-221ENST00000583080 PARP14Q460N5 1801 aa19.6■□□□□ 0.73
SREBF1-221ENST00000583080 ZNF532Q9HCE3 1301 aa19.59■□□□□ 0.73
SREBF1-221ENST00000583080 ERC1Q8IUD2 1116 aa19.59■□□□□ 0.73
SREBF1-221ENST00000583080 SHCBP1Q8NEM2 672 aa19.59■□□□□ 0.73
SREBF1-221ENST00000583080 DYNLL2Q96FJ2 89 aa19.59■□□□□ 0.73
SREBF1-221ENST00000583080 COL25A1Q9BXS0 654 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-221ENST00000583080 DCP1AQ9NPI6 582 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-221ENST00000583080 PRKAG2Q9UGJ0 569 aa19.59■□□□□ 0.73
SREBF1-221ENST00000583080 MYH8P13535 1937 aa19.59■□□□□ 0.73
SREBF1-221ENST00000583080 TCRBV5S4A2TA0A5A2 114 aa19.58■□□□□ 0.72
SREBF1-221ENST00000583080 MYCNP04198 464 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-221ENST00000583080 TRIM60Q495X7 471 aa19.58■□□□□ 0.72
SREBF1-221ENST00000583080 PRAMEF19Q5SWL8 479 aa19.58■□□□□ 0.72
SREBF1-221ENST00000583080 C9orf50Q5SZB4 431 aa19.58■□□□□ 0.72
SREBF1-221ENST00000583080 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.58■□□□□ 0.72
SREBF1-221ENST00000583080 SPICE1Q8N0Z3 855 aa19.58■□□□□ 0.72
SREBF1-221ENST00000583080 ATG4CQ96DT6 458 aa19.58■□□□□ 0.72
SREBF1-221ENST00000583080 PRDM5Q9NQX1 630 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-221ENST00000583080 KBTBD13C9JR72 458 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 SMIM22K7EJ46 135 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 GOLIM4O00461 696 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 SEPT4O43236 478 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 STRNO43815 780 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 AKR1B1P15121 316 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 PLS1Q14651 629 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 SNX17Q15036 470 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 TTF1Q15361 905 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-221ENST00000583080 SHHQ15465 462 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 FAM47AQ5JRC9 791 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 SLC39A5Q6ZMH5 540 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 TMEM179Q6ZVK1 233 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 SIAH1Q8IUQ4 282 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 ARRDC4Q8NCT1 418 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 RHPN1Q8TCX5 695 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 DNAJC2Q99543 621 aaKnown RBP19.57■□□□□ 0.72
SREBF1-221ENST00000583080 HOXC10Q9NYD6 342 aa19.57■□□□□ 0.72
SREBF1-221ENST00000583080 FLOT1O75955 427 aa19.56■□□□□ 0.72
SREBF1-221ENST00000583080 DSG3P32926 999 aa19.56■□□□□ 0.72
SREBF1-221ENST00000583080 ZNF697Q5TEC3 545 aa19.56■□□□□ 0.72
SREBF1-221ENST00000583080 SAMD1Q6SPF0 538 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-221ENST00000583080 NCAPG2Q86XI2 1143 aa19.56■□□□□ 0.72
SREBF1-221ENST00000583080 PANK1Q8TE04 598 aa19.56■□□□□ 0.72
SREBF1-221ENST00000583080 ARMT1Q9H993 441 aa19.56■□□□□ 0.72
SREBF1-221ENST00000583080 PDLIM7Q9NR12 457 aa19.56■□□□□ 0.72
SREBF1-221ENST00000583080 BAZ2AQ9UIF9 1905 aaKnown RBP19.56■□□□□ 0.72
SREBF1-221ENST00000583080 COL11A1P12107 1806 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-221ENST00000583080 APBB1O00213 710 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 PRKAB2O43741 272 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 ADCYAP1R1P41586 468 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 ICA1Q05084 483 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 LRRC41Q15345 812 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 SH3RF1Q7Z6J0 888 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 MB21D1Q8N884 522 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 BADQ92934 168 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 FERMT2Q96AC1 680 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 MAML3Q96JK9 1138 aa19.55■□□□□ 0.72
SREBF1-221ENST00000583080 CYP2D7A0A087X1C5 515 aa19.54■□□□□ 0.72
SREBF1-221ENST00000583080 MROH8Q9H579 483 aa19.54■□□□□ 0.72
SREBF1-221ENST00000583080 VCPKMTQ9H867 229 aa19.54■□□□□ 0.72
SREBF1-221ENST00000583080 SWAP70Q9UH65 585 aa19.54■□□□□ 0.72
SREBF1-221ENST00000583080 TRIM43BA6NCK2 446 aa19.53■□□□□ 0.72
SREBF1-221ENST00000583080 MBD4O95243 580 aa19.53■□□□□ 0.72
SREBF1-221ENST00000583080 TMEM132BQ14DG7 1078 aa19.53■□□□□ 0.72
SREBF1-221ENST00000583080 ABRAQ8N0Z2 381 aa19.53■□□□□ 0.72
SREBF1-221ENST00000583080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
SREBF1-221ENST00000583080 TRIM43Q96BQ3 446 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-221ENST00000583080 BCL11AQ9H165 835 aa19.53■□□□□ 0.72
SREBF1-221ENST00000583080 ARHGEF10LQ9HCE6 1279 aa19.53■□□□□ 0.72
SREBF1-221ENST00000583080 TMX2Q9Y320 296 aa19.53■□□□□ 0.72
SREBF1-221ENST00000583080 EYSQ5T1H1 3165 aa19.53■□□□□ 0.72
SREBF1-221ENST00000583080 CHGBP05060 677 aa19.52■□□□□ 0.72
SREBF1-221ENST00000583080 CDX2Q99626 313 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-221ENST00000583080 FBXO28Q9NVF7 368 aa19.52■□□□□ 0.72
SREBF1-221ENST00000583080 SLC5A4Q9NY91 659 aa19.52■□□□□ 0.72
SREBF1-221ENST00000583080 ZNFX1Q9P2E3 1918 aaKnown RBP19.51■□□□□ 0.71
SREBF1-221ENST00000583080 WDR46O15213 610 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms