RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 LTBP2Q14767 1821 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 A0A1W2PRG0 241 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 STRNO43815 780 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 RLBP1P12271 317 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 ADORA2AP29274 412 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 RTP1P59025 263 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 TTF1Q15361 905 aaPredicted RBP16.45■□□□□ 0.22
SS18-222ENST00000582792 ERC1Q8IUD2 1116 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 CRNKL1Q9BZJ0 848 aaKnown RBP16.45■□□□□ 0.22
SS18-222ENST00000582792 SPATC1LQ9H0A9 340 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 PRKAG2Q9UGJ0 569 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 EXOC6BQ9Y2D4 811 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 RLFQ13129 1914 aa16.45■□□□□ 0.22
SS18-222ENST00000582792 MPHOSPH10O00566 681 aaKnown RBP16.44■□□□□ 0.22
SS18-222ENST00000582792 EVX2Q03828 476 aa16.44■□□□□ 0.22
SS18-222ENST00000582792 GJC2Q5T442 439 aaPredicted RBP16.44■□□□□ 0.22
SS18-222ENST00000582792 ARRDC4Q8NCT1 418 aa16.44■□□□□ 0.22
SS18-222ENST00000582792 SHCBP1Q8NEM2 672 aa16.44■□□□□ 0.22
SS18-222ENST00000582792 GUCD1Q96NT3 240 aa16.44■□□□□ 0.22
SS18-222ENST00000582792 MCM9Q9NXL9 1143 aa16.44■□□□□ 0.22
SS18-222ENST00000582792 PDE6AP16499 860 aa16.43■□□□□ 0.22
SS18-222ENST00000582792 ERCC3P19447 782 aa16.43■□□□□ 0.22
SS18-222ENST00000582792 SLC9C2Q5TAH2 1124 aa16.43■□□□□ 0.22
SS18-222ENST00000582792 TANGO6Q9C0B7 1094 aa16.43■□□□□ 0.22
SS18-222ENST00000582792 ATP11BQ9Y2G3 1177 aa16.43■□□□□ 0.22
SS18-222ENST00000582792 PRUNE2Q8WUY3 3088 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 KBTBD13C9JR72 458 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 SEPT4O43236 478 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 COBLO75128 1261 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 KIAA1755Q5JYT7 1200 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 SLC39A5Q6ZMH5 540 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 TMEM179Q6ZVK1 233 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 MROH8Q9H579 483 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 DCP1AQ9NPI6 582 aaPredicted RBP16.42■□□□□ 0.22
SS18-222ENST00000582792 SLC5A4Q9NY91 659 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 ZNF532Q9HCE3 1301 aa16.42■□□□□ 0.22
SS18-222ENST00000582792 TCRBV5S4A2TA0A5A2 114 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 DSG3P32926 999 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 SNX17Q15036 470 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 HSP90AB4PQ58FF6 505 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 ANO1Q5XXA6 986 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.41■□□□□ 0.22
SS18-222ENST00000582792 ABRAQ8N0Z2 381 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 SDR42E1Q8WUS8 393 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 FAM161BQ96MY7 647 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 SWAP70Q9UH65 585 aa16.41■□□□□ 0.22
SS18-222ENST00000582792 ZNF697Q5TEC3 545 aa16.4■□□□□ 0.22
SS18-222ENST00000582792 LCORLQ8N3X6 602 aa16.4■□□□□ 0.22
SS18-222ENST00000582792 SLC44A5Q8NCS7 719 aa16.4■□□□□ 0.22
SS18-222ENST00000582792 RHPN1Q8TCX5 695 aa16.4■□□□□ 0.22
SS18-222ENST00000582792 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.4■□□□□ 0.22
SS18-222ENST00000582792 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
SS18-222ENST00000582792 COL25A1Q9BXS0 654 aaPredicted RBP16.4■□□□□ 0.22
SS18-222ENST00000582792 TMX2Q9Y320 296 aa16.4■□□□□ 0.22
SS18-222ENST00000582792 VCANP13611 3396 aa16.4■□□□□ 0.22
SS18-222ENST00000582792 MYH8P13535 1937 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 FLOT1O75955 427 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 CYP2D6P10635 497 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 PLS1Q14651 629 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 SHHQ15465 462 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 TRIM60Q495X7 471 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 NCAPG2Q86XI2 1143 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 SIAH1Q8IUQ4 282 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 ATG4CQ96DT6 458 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 DYNLL2Q96FJ2 89 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 MAML3Q96JK9 1138 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 ARHGEF10LQ9HCE6 1279 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 PRDM5Q9NQX1 630 aaPredicted RBP16.39■□□□□ 0.21
SS18-222ENST00000582792 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
SS18-222ENST00000582792 GOLIM4O00461 696 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
SS18-222ENST00000582792 FCER1AP12319 257 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 ADCYAP1R1P41586 468 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 ICA1Q05084 483 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 LRRC41Q15345 812 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 PRAMEF19Q5SWL8 479 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 C9orf50Q5SZB4 431 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 C1orf53Q5VUE5 145 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 CLEC10AQ8IUN9 316 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 SPICE1Q8N0Z3 855 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 CLASRPQ8N2M8 674 aaKnown RBP16.38■□□□□ 0.21
SS18-222ENST00000582792 BADQ92934 168 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
SS18-222ENST00000582792 VCPKMTQ9H867 229 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 PDLIM7Q9NR12 457 aa16.38■□□□□ 0.21
SS18-222ENST00000582792 WDR46O15213 610 aaKnown RBP16.37■□□□□ 0.21
SS18-222ENST00000582792 AKR1B1P15121 316 aa16.37■□□□□ 0.21
SS18-222ENST00000582792 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
SS18-222ENST00000582792 KIF1BPQ96EK5 621 aa16.37■□□□□ 0.21
SS18-222ENST00000582792 ARMT1Q9H993 441 aa16.37■□□□□ 0.21
SS18-222ENST00000582792 ATP8A2Q9NTI2 1148 aa16.37■□□□□ 0.21
SS18-222ENST00000582792 CDH23Q9H251 3354 aa16.37■□□□□ 0.21
SS18-222ENST00000582792 TRIM43BA6NCK2 446 aa16.36■□□□□ 0.21
SS18-222ENST00000582792 SLC25A27O95847 323 aa16.36■□□□□ 0.21
SS18-222ENST00000582792 TMEM132BQ14DG7 1078 aa16.36■□□□□ 0.21
SS18-222ENST00000582792 SH3RF1Q7Z6J0 888 aa16.36■□□□□ 0.21
SS18-222ENST00000582792 FERMT2Q96AC1 680 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms