RNA–Protein interactions for RNA: ENST00000582590.1

SLC46A1-203, Transcript of solute carrier family 46 member 1, humanhuman

TSL 2

Gene SLC46A1, Length 1,435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-203ENST00000582590 RNF41Q9H4P4 317 aaPredicted RBP22.54■■□□□ 1.2
SLC46A1-203ENST00000582590 RPAP3Q9H6T3 665 aaPredicted RBP22.54■■□□□ 1.2
SLC46A1-203ENST00000582590 TNS4Q8IZW8 715 aa22.53■■□□□ 1.2
SLC46A1-203ENST00000582590 SPICE1Q8N0Z3 855 aa22.53■■□□□ 1.2
SLC46A1-203ENST00000582590 P2RX7Q99572 595 aaKnown RBP22.53■■□□□ 1.2
SLC46A1-203ENST00000582590 CDC45O75419 566 aa22.52■■□□□ 1.2
SLC46A1-203ENST00000582590 TTLL1O95922 423 aa22.52■■□□□ 1.2
SLC46A1-203ENST00000582590 GCLCP48506 637 aaPredicted RBP22.52■■□□□ 1.2
SLC46A1-203ENST00000582590 LACTBP83111 547 aaPredicted RBP22.52■■□□□ 1.2
SLC46A1-203ENST00000582590 CAP1Q01518 475 aa22.52■■□□□ 1.2
SLC46A1-203ENST00000582590 CATSPERGQ6ZRH7 1159 aa22.52■■□□□ 1.2
SLC46A1-203ENST00000582590 GOPCQ9HD26 462 aa22.52■■□□□ 1.2
SLC46A1-203ENST00000582590 CLIP2Q9UDT6 1046 aa22.52■■□□□ 1.2
SLC46A1-203ENST00000582590 NEDD4P46934 1319 aa22.51■■□□□ 1.19
SLC46A1-203ENST00000582590 HERVK_113P62684 666 aa22.51■■□□□ 1.19
SLC46A1-203ENST00000582590 ANKRD13CQ8N6S4 541 aa22.51■■□□□ 1.19
SLC46A1-203ENST00000582590 MKL1Q969V6 931 aa22.51■■□□□ 1.19
SLC46A1-203ENST00000582590 IL17RBQ9NRM6 502 aa22.51■■□□□ 1.19
SLC46A1-203ENST00000582590 U3KPZ7 1027 aaPredicted RBP22.51■■□□□ 1.19
SLC46A1-203ENST00000582590 NMT2O60551 498 aa22.5■■□□□ 1.19
SLC46A1-203ENST00000582590 CASC1Q6TDU7 716 aa22.5■■□□□ 1.19
SLC46A1-203ENST00000582590 KIAA1211Q6ZU35 1233 aa22.5■■□□□ 1.19
SLC46A1-203ENST00000582590 MAP4K1Q92918 833 aa22.5■■□□□ 1.19
SLC46A1-203ENST00000582590 MCOLN1Q9GZU1 580 aa22.5■■□□□ 1.19
SLC46A1-203ENST00000582590 SYNPO2Q9UMS6 1093 aa22.5■■□□□ 1.19
SLC46A1-203ENST00000582590 KIF22Q14807 665 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 FAM110CQ1W6H9 321 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 PPP4R3BQ5MIZ7 849 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 OTOP1Q7RTM1 612 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 NKX2-3Q8TAU0 364 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 ESR2Q92731 530 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 TANGO6Q9C0B7 1094 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 ARHGAP39Q9C0H5 1083 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 EFCC1Q9HA90 598 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 TRIM17Q9Y577 477 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 LAMA4Q16363 1823 aa22.49■■□□□ 1.19
SLC46A1-203ENST00000582590 F5H6K3 240 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 WDR46O15213 610 aaKnown RBP22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 RAD21O60216 631 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 KLRC3Q07444 240 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 LRRC47Q8N1G4 583 aaKnown RBP22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 GTF3C2Q8WUA4 911 aaPredicted RBP22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 LSG1Q9H089 658 aaKnown RBP22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 STX8Q9UNK0 236 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 ECM2O94769 699 aaPredicted RBP22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 NDUFB10O96000 172 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 CYP21A2P08686 494 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 CTGFP29279 349 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 NT5C2P49902 561 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 ARHGEF6Q15052 776 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 TCP11L1Q9NUJ3 509 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 MORF4L1Q9UBU8 362 aa22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 RBM8AQ9Y5S9 174 aaKnown RBP22.48■■□□□ 1.19
SLC46A1-203ENST00000582590 NOVP48745 357 aa22.47■■□□□ 1.19
SLC46A1-203ENST00000582590 PKN2Q16513 984 aaKnown RBP22.47■■□□□ 1.19
SLC46A1-203ENST00000582590 POTEEQ6S8J3 1075 aa22.47■■□□□ 1.19
SLC46A1-203ENST00000582590 GMCL1P1Q8NEA9 526 aa22.47■■□□□ 1.19
SLC46A1-203ENST00000582590 TRIM47Q96LD4 638 aa22.47■■□□□ 1.19
SLC46A1-203ENST00000582590 TXNRD2Q9NNW7 524 aa22.47■■□□□ 1.19
SLC46A1-203ENST00000582590 ANO2Q9NQ90 1003 aa22.47■■□□□ 1.19
SLC46A1-203ENST00000582590 RBPJLQ9UBG7 517 aa22.47■■□□□ 1.19
SLC46A1-203ENST00000582590 SPDYE16A6NNV3 312 aaPredicted RBP22.46■■□□□ 1.19
SLC46A1-203ENST00000582590 B4E1Z4 1266 aa22.46■■□□□ 1.19
SLC46A1-203ENST00000582590 PEX10O60683 326 aa22.46■■□□□ 1.19
SLC46A1-203ENST00000582590 PSMC4P43686 418 aa22.46■■□□□ 1.19
SLC46A1-203ENST00000582590 COG2Q14746 738 aa22.46■■□□□ 1.19
SLC46A1-203ENST00000582590 FAM83BQ5T0W9 1011 aa22.46■■□□□ 1.19
SLC46A1-203ENST00000582590 LBX2Q6XYB7 198 aa22.46■■□□□ 1.19
SLC46A1-203ENST00000582590 CNNM2Q9H8M5 875 aa22.46■■□□□ 1.19
SLC46A1-203ENST00000582590 KDM4AO75164 1064 aa22.45■■□□□ 1.18
SLC46A1-203ENST00000582590 FLOT1O75955 427 aa22.45■■□□□ 1.18
SLC46A1-203ENST00000582590 NUP88Q99567 741 aaPredicted RBP22.45■■□□□ 1.18
SLC46A1-203ENST00000582590 PAGR1Q9BTK6 254 aa22.45■■□□□ 1.18
SLC46A1-203ENST00000582590 KRT23Q9C075 422 aa22.45■■□□□ 1.18
SLC46A1-203ENST00000582590 FMNL1O95466 1100 aaPredicted RBP22.44■■□□□ 1.18
SLC46A1-203ENST00000582590 FCGRTP55899 365 aa22.44■■□□□ 1.18
SLC46A1-203ENST00000582590 SLFN13Q68D06 897 aa22.44■■□□□ 1.18
SLC46A1-203ENST00000582590 GPRC5AQ8NFJ5 357 aa22.44■■□□□ 1.18
SLC46A1-203ENST00000582590 HOXC10Q9NYD6 342 aa22.44■■□□□ 1.18
SLC46A1-203ENST00000582590 RABGAP1Q9Y3P9 1069 aa22.44■■□□□ 1.18
SLC46A1-203ENST00000582590 TAF6LQ9Y6J9 622 aa22.44■■□□□ 1.18
SLC46A1-203ENST00000582590 CNMDO75829 334 aa22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 GNRH1P01148 92 aa22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 DSG3P32926 999 aa22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 ERVK-9P63128 1117 aa22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 ERVK-24P63145 666 aa22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 FBXO46Q6PJ61 603 aaPredicted RBP22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 FBXO28Q9NVF7 368 aa22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 ZSWIM5Q9P217 1185 aa22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 MYPNQ86TC9 1320 aa22.43■■□□□ 1.18
SLC46A1-203ENST00000582590 RCSD1Q6JBY9 416 aa22.42■■□□□ 1.18
SLC46A1-203ENST00000582590 IQCA1Q86XH1 822 aa22.42■■□□□ 1.18
SLC46A1-203ENST00000582590 ZKSCAN3Q9BRR0 538 aa22.42■■□□□ 1.18
SLC46A1-203ENST00000582590 PTPN22Q9Y2R2 807 aa22.42■■□□□ 1.18
SLC46A1-203ENST00000582590 ZSWIM8A7E2V4 1837 aa22.42■■□□□ 1.18
SLC46A1-203ENST00000582590 E7EWF7 191 aa22.41■■□□□ 1.18
SLC46A1-203ENST00000582590 TOP1P11387 765 aaKnown RBP22.41■■□□□ 1.18
SLC46A1-203ENST00000582590 TRDNQ13061 729 aa22.41■■□□□ 1.18
SLC46A1-203ENST00000582590 Q3C1V9 767 aa22.41■■□□□ 1.18
SLC46A1-203ENST00000582590 ATG4CQ96DT6 458 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms