RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 ZNRF3Q9ULT6 936 aa12.92□□□□□ -0.34
GGA3-213ENST00000582486 MYO3BQ8WXR4 1341 aa12.92□□□□□ -0.34
GGA3-213ENST00000582486 PLIN4Q96Q06 1357 aa12.92□□□□□ -0.34
GGA3-213ENST00000582486 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
GGA3-213ENST00000582486 PALM3A6NDB9 673 aaPredicted RBP12.91□□□□□ -0.34
GGA3-213ENST00000582486 SCG2P13521 617 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 GNAQP50148 359 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 PFKFB3Q16875 520 aaPredicted RBP12.91□□□□□ -0.34
GGA3-213ENST00000582486 ADALQ6DHV7 355 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 SGIP1Q9BQI5 828 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 NUP62CLQ9H1M0 184 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 EHD4Q9H223 541 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 TSPY26PQ9H489 355 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 GOLPH3LQ9H4A5 285 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
GGA3-213ENST00000582486 PI4KBQ9UBF8 816 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 IGKV6D-41A0A0C4DH26 115 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 FAM196BA6NMK8 535 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
GGA3-213ENST00000582486 TOB1P50616 345 aaPredicted RBP12.91□□□□□ -0.34
GGA3-213ENST00000582486 EIF6P56537 245 aaKnown RBP12.91□□□□□ -0.34
GGA3-213ENST00000582486 SLC39A14Q15043 492 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 SLC35G1Q2M3R5 365 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 CLEC10AQ8IUN9 316 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.343e-6■■□□□ 13.9
GGA3-213ENST00000582486 PSME4Q14997 1843 aa12.91□□□□□ -0.34
GGA3-213ENST00000582486 CYTH3O43739 400 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.34
GGA3-213ENST00000582486 PTPAQ15257 358 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 USP17L2Q6R6M4 530 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 TAOK3Q9H2K8 898 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 SRCAPQ6ZRS2 3230 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 KLRF2D3W0D1 207 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 MPHOSPH10O00566 681 aaKnown RBP12.9□□□□□ -0.34
GGA3-213ENST00000582486 PARP1P09874 1014 aaKnown RBP12.9□□□□□ -0.34
GGA3-213ENST00000582486 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 KRT2P35908 639 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
GGA3-213ENST00000582486 NPY5RQ15761 445 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 OGFOD1Q8N543 542 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 FSIP1Q8NA03 581 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 TNMDQ9H2S6 317 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 CPVLQ9H3G5 476 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 CABP5Q9NP86 173 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 HDAC9Q9UKV0 1011 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 MYH8P13535 1937 aa12.9□□□□□ -0.34
GGA3-213ENST00000582486 USP17L5A8MUK1 530 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 CXCL9Q07325 125 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 CCDC73Q6ZRK6 1079 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 LRRC47Q8N1G4 583 aaKnown RBP12.89□□□□□ -0.35
GGA3-213ENST00000582486 FAM43AQ8N2R8 423 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 RNF214Q8ND24 703 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 CLSTN2Q9H4D0 955 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 A0A1B0GVL5 298 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 A0A1W2PQ27 194 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 A0A1W2PQ64 194 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 A0A1W2PQD8 194 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 CLRN2A0PK11 232 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 NFKBIEO00221 500 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 TTLL1O95922 423 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 PTGER2P43116 358 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 DLGAP5Q15398 846 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 MAP3K11Q16584 847 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 RILPL1Q5EBL4 403 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 EARS2Q5JPH6 523 aaKnown RBP12.89□□□□□ -0.35
GGA3-213ENST00000582486 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
GGA3-213ENST00000582486 CKAP2LQ8IYA6 745 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 ENGASEQ8NFI3 743 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
GGA3-213ENST00000582486 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
GGA3-213ENST00000582486 LZTS2Q9BRK4 669 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
GGA3-213ENST00000582486 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 PPP6R2O75170 966 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 ENTPD3O75355 529 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 PDHBP11177 359 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 NLRP5P59047 1200 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 FAM160A1Q05DH4 1040 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 FOXP4Q8IVH2 680 aaPredicted RBP12.88□□□□□ -0.35
GGA3-213ENST00000582486 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 BRMS1Q9HCU9 246 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
GGA3-213ENST00000582486 SIPA1L1O43166 1804 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 BRCA1P38398 1863 aaKnown RBP12.88□□□□□ -0.35
GGA3-213ENST00000582486 TCP10L2B9ZVM9 353 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 SHROOM1Q2M3G4 852 aaPredicted RBP12.88□□□□□ -0.35
GGA3-213ENST00000582486 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
GGA3-213ENST00000582486 AGBL3Q8NEM8 1001 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.88□□□□□ -0.35
GGA3-213ENST00000582486 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
GGA3-213ENST00000582486 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 NDUFA8P51970 172 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms