RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 TNFRSF25Q93038 417 aa12.23□□□□□ -0.45
CDK5RAP3-225ENST00000582482 TEX33O43247 280 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 TRIM37O94972 964 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 TPM3P06753 285 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 TERF1P54274 439 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PICALMQ13492 652 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 MTF1Q14872 753 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 TTC38Q5R3I4 469 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 CPLX3Q8WVH0 158 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 MTRQ99707 1265 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 NYXQ9GZU5 481 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PCDHAC2Q9Y5I4 1007 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 SRPRBQ9Y5M8 271 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 KIAA1551Q9HCM1 1747 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 CCDC196A0A1B0GTZ2 297 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PRPF3O43395 683 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 NCBP1Q09161 790 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 MKRN4PQ13434 485 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 SYT10Q6XYQ8 523 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 LRRC15Q8TF66 581 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PPP1R13BQ96KQ4 1090 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 DESI2Q9BSY9 194 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 NID2Q14112 1375 aa12.22□□□□□ -0.45
CDK5RAP3-225ENST00000582482 CAVIN2O95810 425 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 DDR1Q08345 913 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 GRAPQ13588 217 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 HEATR3Q7Z4Q2 680 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 GRAPLQ8TC17 118 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 SMARCE1Q969G3 411 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PAGE5Q96GU1 130 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 AFF2P51816 1311 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 FAM237AA0A1B0GTK4 181 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 SCG2P13521 617 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 BTDP43251 543 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 CBX1P83916 185 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PTPN14Q15678 1187 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 TMTC2Q8N394 836 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 UBA5Q9GZZ9 404 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 TMEM60Q9H2L4 133 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 KCNQ5Q9NR82 932 aa12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 MKRN1Q9UHC7 482 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 ZNF215Q9UL58 517 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-225ENST00000582482 XDHP47989 1333 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 FRMPD2Q68DX3 1309 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 GYS1P13807 737 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CUL4BQ13620 913 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 KARSQ15046 597 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 GJA10Q969M2 543 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TIGD1Q96MW7 591 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 BPIFA3Q9BQP9 254 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 ANKRD2Q9GZV1 360 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 PDCL3Q9H2J4 239 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 KAT14Q9H8E8 782 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 IGSF3O75054 1194 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 FGRP09769 529 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SCNN1DP51172 638 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 MORC3Q14149 939 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 INF2Q27J81 1249 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 MSL1Q68DK7 614 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 WWC2Q6AWC2 1192 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 NYAP1Q6ZVC0 841 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RPGRQ92834 1020 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 OSBPL5Q9H0X9 879 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 EPC1Q9H2F5 836 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SMTNL1A8MU46 457 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SERPINB2P05120 415 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CCT6AP40227 531 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 TOGARAM2Q6ZUX3 1019 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RTFDC1Q9BY42 306 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 MAD2L2Q9UI95 211 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CTNND2Q9UQB3 1225 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 GDAQ9Y2T3 454 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 LAMB1P07942 1786 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 HSPA1LP34931 641 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 GTF2F1P35269 517 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 SARSP49591 514 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 CACNB3P54284 484 aa12.19□□□□□ -0.46
CDK5RAP3-225ENST00000582482 RC3H1Q5TC82 1133 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms