RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 EMILIN3Q9NT22 766 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 TCP11L1Q9NUJ3 509 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 MTMR4Q9NYA4 1195 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 HOXC10Q9NYD6 342 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-212ENST00000582122 MYPNQ86TC9 1320 aa12.32□□□□□ -0.44
TOP3A-212ENST00000582122 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 WDR46O15213 610 aaKnown RBP12.31□□□□□ -0.44
TOP3A-212ENST00000582122 PRDM1O75626 825 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 VCAM1P19320 739 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 PRMT2P55345 433 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 ATP2B2Q01814 1243 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 FAM110CQ1W6H9 321 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 RNF20Q5VTR2 975 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 C17orf99Q6UX52 265 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 STK11IPQ8N1F8 1099 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 ACER1Q8TDN7 264 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 MAP4K1Q92918 833 aa12.31□□□□□ -0.44
TOP3A-212ENST00000582122 ASCC2Q9H1I8 757 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-212ENST00000582122 IGKV6D-41A0A0C4DH26 115 aa12.3□□□□□ -0.44
TOP3A-212ENST00000582122 EPB41L2O43491 1005 aaKnown RBP12.3□□□□□ -0.44
TOP3A-212ENST00000582122 COG2Q14746 738 aa12.3□□□□□ -0.44
TOP3A-212ENST00000582122 SHROOM1Q2M3G4 852 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-212ENST00000582122 TREML2Q5T2D2 321 aa12.3□□□□□ -0.44
TOP3A-212ENST00000582122 LBX2Q6XYB7 198 aa12.3□□□□□ -0.44
TOP3A-212ENST00000582122 CATSPERGQ6ZRH7 1159 aa12.3□□□□□ -0.44
TOP3A-212ENST00000582122 MB21D1Q8N884 522 aa12.3□□□□□ -0.44
TOP3A-212ENST00000582122 CEP95Q96GE4 821 aa12.3□□□□□ -0.44
TOP3A-212ENST00000582122 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.3□□□□□ -0.44
TOP3A-212ENST00000582122 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
TOP3A-212ENST00000582122 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 SMIM22K7EJ46 135 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 REC8O95072 547 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 CYP2C8P10632 490 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 BCRP11274 1271 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 HAND2P61296 217 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 CCNA1P78396 465 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 LACTBP83111 547 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-212ENST00000582122 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
TOP3A-212ENST00000582122 RRP12Q5JTH9 1297 aaKnown RBP12.29□□□□□ -0.44
TOP3A-212ENST00000582122 RCSD1Q6JBY9 416 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 GMCL1P1Q8NEA9 526 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 RPAP3Q9H6T3 665 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-212ENST00000582122 RABGAP1Q9Y3P9 1069 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 ADGRA2Q96PE1 1338 aa12.29□□□□□ -0.44
TOP3A-212ENST00000582122 FDX1P10109 184 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 NOVP48745 357 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 FCGRTP55899 365 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 HERVK_113P62684 666 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 SART3Q15020 963 aaKnown RBP12.28□□□□□ -0.44
TOP3A-212ENST00000582122 FAM47AQ5JRC9 791 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 RALYLQ86SE5 291 aaKnown RBP12.28□□□□□ -0.44
TOP3A-212ENST00000582122 DGKHQ86XP1 1220 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
TOP3A-212ENST00000582122 GPRC5AQ8NFJ5 357 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 TANGO6Q9C0B7 1094 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 R3HDMLQ9H3Y0 253 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 MORF4L1Q9UBU8 362 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 CPA4Q9UI42 421 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 STX8Q9UNK0 236 aa12.28□□□□□ -0.44
TOP3A-212ENST00000582122 RBM8AQ9Y5S9 174 aaKnown RBP12.28□□□□□ -0.44
TOP3A-212ENST00000582122 GREB1LQ9C091 1923 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-212ENST00000582122 F5H6K3 240 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 TOP1P11387 765 aaKnown RBP12.27□□□□□ -0.45
TOP3A-212ENST00000582122 PTH1RQ03431 593 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 KLRC3Q07444 240 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 TBC1D10CQ8IV04 446 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 NCOA7Q8NI08 942 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 GMCL1Q96IK5 515 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.45
TOP3A-212ENST00000582122 UBAC1Q9BSL1 405 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 MTA3Q9BTC8 594 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 LSG1Q9H089 658 aaKnown RBP12.27□□□□□ -0.45
TOP3A-212ENST00000582122 LAMA4Q16363 1823 aa12.27□□□□□ -0.45
TOP3A-212ENST00000582122 KIAA0100Q14667 2235 aaKnown RBP12.26□□□□□ -0.45
TOP3A-212ENST00000582122 ERICH2A1L162 156 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 RAD21O60216 631 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 PLA2G6O60733 806 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 FLOT1O75955 427 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 ZKSCAN1P17029 563 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-212ENST00000582122 MAPK4P31152 587 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 COPB2P35606 906 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 KRT32Q14532 448 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 FAM160B2Q86V87 743 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 CHURC1Q8WUH1 139 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 ANKS1AQ92625 1134 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 COA7Q96BR5 231 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 NBPF3Q9H094 633 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 IL25Q9H293 177 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 TRIM17Q9Y577 477 aa12.26□□□□□ -0.45
TOP3A-212ENST00000582122 KDM4AO75164 1064 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms