RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 LTKP29376 864 aa6.16□□□□□ -1.42
SMG8-205ENST00000580798 SNX17Q15036 470 aa6.16□□□□□ -1.42
SMG8-205ENST00000580798 FEZF2Q8TBJ5 459 aa6.16□□□□□ -1.42
SMG8-205ENST00000580798 DACT3Q96B18 629 aaPredicted RBP6.16□□□□□ -1.42
SMG8-205ENST00000580798 TMEM87BQ96K49 555 aa6.16□□□□□ -1.42
SMG8-205ENST00000580798 WWC3Q9ULE0 1092 aa6.16□□□□□ -1.42
SMG8-205ENST00000580798 PGRP06401 933 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 ADRB1P08588 477 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 TRIM26Q12899 539 aaPredicted RBP6.15□□□□□ -1.42
SMG8-205ENST00000580798 SLC6A19Q695T7 634 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 SPPL2CQ8IUH8 684 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 ZSCAN29Q8IWY8 852 aaPredicted RBP6.15□□□□□ -1.42
SMG8-205ENST00000580798 DTWD2Q8NBA8 298 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 SIGLEC10Q96LC7 697 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 MBD1Q9UIS9 605 aaPredicted RBP6.15□□□□□ -1.42
SMG8-205ENST00000580798 CEP131Q9UPN4 1083 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 CDK11AQ9UQ88 783 aaPredicted RBP6.15□□□□□ -1.42
SMG8-205ENST00000580798 IRAK3Q9Y616 596 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 TACC3Q9Y6A5 838 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 IVNS1ABPQ9Y6Y0 642 aa6.15□□□□□ -1.42
SMG8-205ENST00000580798 AFF3P51826 1226 aaKnown RBP6.14□□□□□ -1.43
SMG8-205ENST00000580798 CHRNEQ04844 493 aa6.14□□□□□ -1.43
SMG8-205ENST00000580798 ALG1LQ6GMV1 187 aa6.14□□□□□ -1.43
SMG8-205ENST00000580798 TTBK2Q6IQ55 1244 aa6.14□□□□□ -1.43
SMG8-205ENST00000580798 PPP1R13LQ8WUF5 828 aa6.14□□□□□ -1.43
SMG8-205ENST00000580798 ASB16Q96NS5 453 aa6.14□□□□□ -1.43
SMG8-205ENST00000580798 TMPRSS5Q9H3S3 457 aa6.14□□□□□ -1.43
SMG8-205ENST00000580798 OR14I1A6ND48 311 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 SLC22A31A6NKX4 558 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 GIPC1O14908 333 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 SEPT6Q14141 434 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 SV2BQ7L1I2 683 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 MCATQ8IVS2 390 aaKnown RBP6.13□□□□□ -1.43
SMG8-205ENST00000580798 ZDHHC14Q8IZN3 488 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 ANKS4BQ8N8V4 417 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 SYTL4Q96C24 671 aaPredicted RBP6.13□□□□□ -1.43
SMG8-205ENST00000580798 C12orf49Q9H741 205 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 EPB41L4AQ9HCS5 686 aaPredicted RBP6.13□□□□□ -1.43
SMG8-205ENST00000580798 KCNH3Q9ULD8 1083 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 PCDHB5Q9Y5E4 795 aa6.13□□□□□ -1.43
SMG8-205ENST00000580798 NOTOA8MTQ0 251 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 EFEMP2O95967 443 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 P4HBP07237 508 aaKnown RBP6.12□□□□□ -1.43
SMG8-205ENST00000580798 USP17L7P0C7H9 530 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 EPHB3P54753 998 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 SRSF3P84103 164 aaKnown RBP6.12□□□□□ -1.43
SMG8-205ENST00000580798 ATP2B2Q01814 1243 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 TEKQ02763 1124 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 VMACQ2NL98 169 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 ADGRF1Q5T601 910 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 SIRT2Q8IXJ6 389 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 LINC01599Q8WXQ3 324 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 ACSF2Q96CM8 615 aaPredicted RBP6.12□□□□□ -1.43
SMG8-205ENST00000580798 BORCS6Q96GS4 357 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 SPG7Q9UQ90 795 aa6.12□□□□□ -1.43
SMG8-205ENST00000580798 LRRN2O75325 713 aa6.11□□□□□ -1.43
SMG8-205ENST00000580798 CDK11BP21127 795 aaKnown RBP6.11□□□□□ -1.43
SMG8-205ENST00000580798 DUSP4Q13115 394 aa6.11□□□□□ -1.43
SMG8-205ENST00000580798 ERICH6BQ5W0A0 696 aa6.11□□□□□ -1.43
SMG8-205ENST00000580798 NLRX1Q86UT6 975 aa6.11□□□□□ -1.43
SMG8-205ENST00000580798 G6PC3Q9BUM1 346 aa6.11□□□□□ -1.43
SMG8-205ENST00000580798 FAM8A1Q9UBU6 413 aa6.11□□□□□ -1.43
SMG8-205ENST00000580798 N4BP3O15049 544 aa6.1□□□□□ -1.43
SMG8-205ENST00000580798 KCNA1Q09470 495 aa6.1□□□□□ -1.43
SMG8-205ENST00000580798 SYT8Q8NBV8 401 aa6.1□□□□□ -1.43
SMG8-205ENST00000580798 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
SMG8-205ENST00000580798 ADAM7Q9H2U9 754 aa6.1□□□□□ -1.43
SMG8-205ENST00000580798 CNTD2Q9H8S5 307 aa6.1□□□□□ -1.43
SMG8-205ENST00000580798 SIRT5Q9NXA8 310 aa6.1□□□□□ -1.43
SMG8-205ENST00000580798 TTF2Q9UNY4 1162 aaKnown RBP6.1□□□□□ -1.43
SMG8-205ENST00000580798 ZNF281Q9Y2X9 895 aa6.1□□□□□ -1.43
SMG8-205ENST00000580798 HRKO00198 91 aa6.09□□□□□ -1.43
SMG8-205ENST00000580798 RPS26P62854 115 aaKnown RBP6.09□□□□□ -1.43
SMG8-205ENST00000580798 ZXDCQ2QGD7 858 aaPredicted RBP6.09□□□□□ -1.43
SMG8-205ENST00000580798 SHISA3A0PJX4 238 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 IRS4O14654 1257 aaPredicted RBP6.08□□□□□ -1.44
SMG8-205ENST00000580798 VIPR1P32241 457 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 PDE4BQ07343 736 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 EFEMP1Q12805 493 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 SP8Q8IXZ3 490 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 CYB5D2Q8WUJ1 264 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 TEPSINQ96N21 525 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 ADAM30Q9UKF2 790 aa6.08□□□□□ -1.44
SMG8-205ENST00000580798 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
SMG8-205ENST00000580798 RBM47A0AV96 593 aaKnown RBP6.07□□□□□ -1.44
SMG8-205ENST00000580798 UPK3BL1B0FP48 263 aa6.07□□□□□ -1.44
SMG8-205ENST00000580798 UPK3BL2E5RIL1 263 aa6.07□□□□□ -1.44
SMG8-205ENST00000580798 USP2O75604 605 aaPredicted RBP6.07□□□□□ -1.44
SMG8-205ENST00000580798 LDHBP07195 334 aaKnown RBP6.07□□□□□ -1.44
SMG8-205ENST00000580798 LMNB1P20700 586 aa6.07□□□□□ -1.44
SMG8-205ENST00000580798 TMEFF1Q8IYR6 380 aa6.07□□□□□ -1.44
SMG8-205ENST00000580798 SPATS1Q496A3 300 aa6.06□□□□□ -1.44
SMG8-205ENST00000580798 AGMOQ6ZNB7 445 aa6.06□□□□□ -1.44
SMG8-205ENST00000580798 LUC7LQ9NQ29 371 aaKnown RBP6.06□□□□□ -1.44
SMG8-205ENST00000580798 ZC3H12DA2A288 527 aaKnown RBP6.05□□□□□ -1.44
SMG8-205ENST00000580798 SDHBP21912 280 aa6.05□□□□□ -1.44
SMG8-205ENST00000580798 EIF4BP23588 611 aaKnown RBP6.05□□□□□ -1.44
SMG8-205ENST00000580798 GNA15P30679 374 aa6.05□□□□□ -1.44
SMG8-205ENST00000580798 CDR1P51861 262 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms