RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 FRAT1Q92837 279 aaPredicted RBP23.33■■□□□ 1.33
NDEL1-209ENST00000580738 FERMT2Q96AC1 680 aa23.33■■□□□ 1.33
NDEL1-209ENST00000580738 TRIM43Q96BQ3 446 aaPredicted RBP23.33■■□□□ 1.33
NDEL1-209ENST00000580738 RLFQ13129 1914 aa23.33■■□□□ 1.32
NDEL1-209ENST00000580738 MYH1P12882 1939 aa23.32■■□□□ 1.32
NDEL1-209ENST00000580738 SEPT4O43236 478 aa23.32■■□□□ 1.32
NDEL1-209ENST00000580738 SMAD3P84022 425 aaKnown RBP23.32■■□□□ 1.32
NDEL1-209ENST00000580738 SEPT2Q15019 361 aa23.32■■□□□ 1.32
NDEL1-209ENST00000580738 SNX17Q15036 470 aa23.32■■□□□ 1.32
NDEL1-209ENST00000580738 CCDC8Q9H0W5 538 aaPredicted RBP23.32■■□□□ 1.32
NDEL1-209ENST00000580738 TTC28Q96AY4 2481 aa23.32■■□□□ 1.32
NDEL1-209ENST00000580738 A0A1W2PRG0 241 aa23.31■■□□□ 1.32
NDEL1-209ENST00000580738 IPO8O15397 1037 aaKnown RBP23.31■■□□□ 1.32
NDEL1-209ENST00000580738 STRNO43815 780 aa23.31■■□□□ 1.32
NDEL1-209ENST00000580738 SURF6O75683 361 aaKnown RBP23.31■■□□□ 1.32
NDEL1-209ENST00000580738 BCAR3O75815 825 aa23.31■■□□□ 1.32
NDEL1-209ENST00000580738 ERCC3P19447 782 aa23.31■■□□□ 1.32
NDEL1-209ENST00000580738 EVX2Q03828 476 aa23.31■■□□□ 1.32
NDEL1-209ENST00000580738 COG2Q14746 738 aa23.31■■□□□ 1.32
NDEL1-209ENST00000580738 SSH3Q8TE77 659 aa23.31■■□□□ 1.32
NDEL1-209ENST00000580738 SPATC1LQ9H0A9 340 aa23.31■■□□□ 1.32
NDEL1-209ENST00000580738 LRRC41Q15345 812 aa23.3■■□□□ 1.32
NDEL1-209ENST00000580738 CERS3Q8IU89 383 aa23.3■■□□□ 1.32
NDEL1-209ENST00000580738 ANTXR1Q9H6X2 564 aa23.3■■□□□ 1.32
NDEL1-209ENST00000580738 PRDM6Q9NQX0 595 aa23.3■■□□□ 1.32
NDEL1-209ENST00000580738 HOXC10Q9NYD6 342 aa23.3■■□□□ 1.32
NDEL1-209ENST00000580738 ITGB8P26012 769 aa23.29■■□□□ 1.32
NDEL1-209ENST00000580738 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
NDEL1-209ENST00000580738 EAF2Q96CJ1 260 aaPredicted RBP23.29■■□□□ 1.32
NDEL1-209ENST00000580738 TANGO6Q9C0B7 1094 aa23.29■■□□□ 1.32
NDEL1-209ENST00000580738 FOSL2P15408 326 aa23.28■■□□□ 1.32
NDEL1-209ENST00000580738 TLE2Q04725 743 aa23.28■■□□□ 1.32
NDEL1-209ENST00000580738 FAM47AQ5JRC9 791 aa23.28■■□□□ 1.32
NDEL1-209ENST00000580738 KIAA1755Q5JYT7 1200 aa23.28■■□□□ 1.32
NDEL1-209ENST00000580738 TMEM57Q8N5G2 664 aa23.28■■□□□ 1.32
NDEL1-209ENST00000580738 SHCBP1Q8NEM2 672 aa23.28■■□□□ 1.32
NDEL1-209ENST00000580738 ZNF236Q9UL36 1845 aa23.27■■□□□ 1.32
NDEL1-209ENST00000580738 EPHB4P54760 987 aa23.27■■□□□ 1.32
NDEL1-209ENST00000580738 GABPAQ06546 454 aa23.27■■□□□ 1.32
NDEL1-209ENST00000580738 C1orf53Q5VUE5 145 aa23.27■■□□□ 1.32
NDEL1-209ENST00000580738 RIOK1Q9BRS2 568 aaKnown RBP23.27■■□□□ 1.32
NDEL1-209ENST00000580738 C1orf115Q9H7X2 142 aa23.27■■□□□ 1.32
NDEL1-209ENST00000580738 MPHOSPH10O00566 681 aaKnown RBP23.26■■□□□ 1.31
NDEL1-209ENST00000580738 POLR3DP05423 398 aaPredicted RBP23.26■■□□□ 1.31
NDEL1-209ENST00000580738 PLS1Q14651 629 aa23.26■■□□□ 1.31
NDEL1-209ENST00000580738 MAML3Q96JK9 1138 aa23.26■■□□□ 1.31
NDEL1-209ENST00000580738 MAP3K12Q12852 859 aa23.25■■□□□ 1.31
NDEL1-209ENST00000580738 NCAPG2Q86XI2 1143 aa23.25■■□□□ 1.31
NDEL1-209ENST00000580738 MROH8Q9H579 483 aa23.25■■□□□ 1.31
NDEL1-209ENST00000580738 SLC5A4Q9NY91 659 aa23.25■■□□□ 1.31
NDEL1-209ENST00000580738 NOP58Q9Y2X3 529 aaKnown RBP23.25■■□□□ 1.31
NDEL1-209ENST00000580738 DSG3P32926 999 aa23.24■■□□□ 1.31
NDEL1-209ENST00000580738 ABRAQ8N0Z2 381 aa23.24■■□□□ 1.31
NDEL1-209ENST00000580738 ATG4CQ96DT6 458 aa23.24■■□□□ 1.31
NDEL1-209ENST00000580738 RNPC3Q96LT9 517 aaKnown RBP23.24■■□□□ 1.31
NDEL1-209ENST00000580738 PHF24Q9UPV7 400 aa23.24■■□□□ 1.31
NDEL1-209ENST00000580738 TACC3Q9Y6A5 838 aa23.24■■□□□ 1.31
NDEL1-209ENST00000580738 MUC3AQ02505 3323 aa23.24■■□□□ 1.31
NDEL1-209ENST00000580738 MB21D1Q8N884 522 aa23.23■■□□□ 1.31
NDEL1-209ENST00000580738 XPNPEP3Q9NQH7 507 aa23.23■■□□□ 1.31
NDEL1-209ENST00000580738 MCM9Q9NXL9 1143 aa23.23■■□□□ 1.31
NDEL1-209ENST00000580738 MAGEB6P1A0A0J9YX57 407 aa23.22■■□□□ 1.31
NDEL1-209ENST00000580738 FLOT1O75955 427 aa23.22■■□□□ 1.31
NDEL1-209ENST00000580738 CLTBP09497 229 aa23.22■■□□□ 1.31
NDEL1-209ENST00000580738 SAMD1Q6SPF0 538 aaPredicted RBP23.22■■□□□ 1.31
NDEL1-209ENST00000580738 CLEC10AQ8IUN9 316 aa23.22■■□□□ 1.31
NDEL1-209ENST00000580738 SIAH1Q8IUQ4 282 aa23.22■■□□□ 1.31
NDEL1-209ENST00000580738 SPICE1Q8N0Z3 855 aa23.22■■□□□ 1.31
NDEL1-209ENST00000580738 SLC44A5Q8NCS7 719 aa23.22■■□□□ 1.31
NDEL1-209ENST00000580738 A0A0G2JMZ2 1700 aa23.22■■□□□ 1.31
NDEL1-209ENST00000580738 PGK1P00558 417 aa23.21■■□□□ 1.31
NDEL1-209ENST00000580738 CYP2D6P10635 497 aa23.21■■□□□ 1.31
NDEL1-209ENST00000580738 FCER1AP12319 257 aa23.21■■□□□ 1.31
NDEL1-209ENST00000580738 GRIN2CQ14957 1233 aa23.21■■□□□ 1.31
NDEL1-209ENST00000580738 USP38Q8NB14 1042 aa23.21■■□□□ 1.31
NDEL1-209ENST00000580738 SYMPKQ92797 1274 aaKnown RBP23.21■■□□□ 1.31
NDEL1-209ENST00000580738 TMEM265A0A087WTH1 108 aa23.2■■□□□ 1.3
NDEL1-209ENST00000580738 KIAA0355O15063 1070 aa23.2■■□□□ 1.3
NDEL1-209ENST00000580738 PQBP1O60828 265 aaKnown RBP23.2■■□□□ 1.3
NDEL1-209ENST00000580738 PGK2P07205 417 aa23.2■■□□□ 1.3
NDEL1-209ENST00000580738 RARBP10826 455 aa23.2■■□□□ 1.3
NDEL1-209ENST00000580738 TAL1P17542 331 aaPredicted RBP23.2■■□□□ 1.3
NDEL1-209ENST00000580738 TMED8Q6PL24 325 aaPredicted RBP23.2■■□□□ 1.3
NDEL1-209ENST00000580738 RAG1P15918 1043 aa23.19■■□□□ 1.3
NDEL1-209ENST00000580738 TMEM132BQ14DG7 1078 aa23.19■■□□□ 1.3
NDEL1-209ENST00000580738 TMEM179Q6ZVK1 233 aa23.19■■□□□ 1.3
NDEL1-209ENST00000580738 SDR42E1Q8WUS8 393 aa23.19■■□□□ 1.3
NDEL1-209ENST00000580738 LENG1Q96BZ8 264 aaPredicted RBP23.19■■□□□ 1.3
NDEL1-209ENST00000580738 DYNLL2Q96FJ2 89 aa23.19■■□□□ 1.3
NDEL1-209ENST00000580738 CRNKL1Q9BZJ0 848 aaKnown RBP23.19■■□□□ 1.3
NDEL1-209ENST00000580738 A0A1W2PQ45 241 aaPredicted RBP23.18■■□□□ 1.3
NDEL1-209ENST00000580738 A0A1W2PQY0 241 aa23.18■■□□□ 1.3
NDEL1-209ENST00000580738 FPGSQ05932 587 aa23.18■■□□□ 1.3
NDEL1-209ENST00000580738 SLC9C2Q5TAH2 1124 aa23.18■■□□□ 1.3
NDEL1-209ENST00000580738 ZKSCAN2Q63HK3 967 aa23.18■■□□□ 1.3
NDEL1-209ENST00000580738 RNF180Q86T96 592 aa23.18■■□□□ 1.3
NDEL1-209ENST00000580738 DCP1AQ9NPI6 582 aaPredicted RBP23.18■■□□□ 1.3
NDEL1-209ENST00000580738 NRBP1Q9UHY1 535 aa23.18■■□□□ 1.3
NDEL1-209ENST00000580738 SMCHD1A6NHR9 2005 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 AKR1B1P15121 316 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms