RNA–Protein interactions for RNA: ENST00000580574.1

CCDC144CP-203, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 3

Gene CCDC144CP, Length 896 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-203ENST00000580574 NTRK3Q16288 839 aa15.18■□□□□ 0.02
CCDC144CP-203ENST00000580574 MIGA2Q7L4E1 593 aa15.18■□□□□ 0.02
CCDC144CP-203ENST00000580574 SMARCC2Q8TAQ2 1214 aa15.18■□□□□ 0.02
CCDC144CP-203ENST00000580574 TMEM47Q9BQJ4 181 aa15.18■□□□□ 0.02
CCDC144CP-203ENST00000580574 NCOA5Q9HCD5 579 aaKnown RBP15.18■□□□□ 0.02
CCDC144CP-203ENST00000580574 ZNF112Q9UJU3 913 aa15.18■□□□□ 0.02
CCDC144CP-203ENST00000580574 SLC12A7Q9Y666 1083 aa15.18■□□□□ 0.02
CCDC144CP-203ENST00000580574 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 CDC27P30260 824 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 CAP2P40123 477 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 CCT2P78371 535 aaKnown RBP15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 ABCB5Q2M3G0 1257 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 NFXL1Q6ZNB6 911 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 TMEM179Q6ZVK1 233 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 PNMA8AQ86V59 439 aaPredicted RBP15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 RAB11FIP4Q86YS3 637 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 MKL1Q969V6 931 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 DCPSQ96C86 337 aaKnown RBP15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 LLPHQ9BRT6 129 aaKnown RBP15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 TRIM34Q9BYJ4 488 aa15.17■□□□□ 0.02
CCDC144CP-203ENST00000580574 DDAH1O94760 285 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 GDF11O95390 407 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 TOP1P11387 765 aaKnown RBP15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 RXRAP19793 462 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 SEPT2Q15019 361 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 PRAMEF18Q5VWM3 479 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 DLK2Q6UY11 383 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 CLEC10AQ8IUN9 316 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 NSUN7Q8NE18 718 aaKnown RBP15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 MAP3K14Q99558 947 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 NYAP2Q9P242 653 aa15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.16■□□□□ 0.02
CCDC144CP-203ENST00000580574 ADM5C9JUS6 153 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 DTNBO60941 627 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 TTLL1O95922 423 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 GH2P01242 217 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 ADD1P35611 737 aaKnown RBP15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 METAP2P50579 478 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 PPP2R5BQ15173 497 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 CATIPQ7Z7H3 387 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 MICU3Q86XE3 530 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 FANCBQ8NB91 859 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 PNMA1Q8ND90 353 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 KAT14Q9H8E8 782 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 KANSL2Q9H9L4 492 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 RRAGCQ9HB90 399 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 CWC22Q9HCG8 908 aaKnown RBP15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 ZBTB21Q9ULJ3 1066 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
CCDC144CP-203ENST00000580574 GOLGA8AA7E2F4 631 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 MPHOSPH10O00566 681 aaKnown RBP15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 HSP90AA1P07900 732 aaKnown RBP15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 CALM1P0DP23 149 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 CALM2P0DP24 149 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 CALM3P0DP25 149 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 SNHG28P0DPA3 235 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 EEF2P13639 858 aaKnown RBP15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 FDPSP14324 419 aaKnown RBP15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 VEGFAP15692 232 aaPredicted RBP15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 FUT2Q10981 343 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 DCAF15Q66K64 600 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 SYNE3Q6ZMZ3 975 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 KRT26Q7Z3Y9 468 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 SULF1Q8IWU6 871 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 HOOK2Q96ED9 719 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 ZNF341Q9BYN7 854 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 GINM1Q9NU53 330 aa15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 NAP1L2Q9ULW6 460 aaPredicted RBP15.14■□□□□ 0.01
CCDC144CP-203ENST00000580574 JAK2O60674 1132 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 CTNND1O60716 968 aaKnown RBP15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 USP2O75604 605 aaPredicted RBP15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 GJB2P29033 226 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 GRM4Q14833 912 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 RTN1Q16799 776 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 SUPT20HL1Q3ZLR7 823 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 NBPF11Q86T75 865 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 USP48Q86UV5 1035 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 CCDC144CPQ8IYA2 1237 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 CHMP4CQ96CF2 233 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 KLRG1Q96E93 195 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 CABP5Q9NP86 173 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 CLIP2Q9UDT6 1046 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 SMC3Q9UQE7 1217 aa15.13■□□□□ 0.01
CCDC144CP-203ENST00000580574 PTPRFP10586 1907 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 PALM3A6NDB9 673 aaPredicted RBP15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 DHX16O60231 1041 aaKnown RBP15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 IFNAR1P17181 557 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 INPP5BP32019 993 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 ICA1Q05084 483 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 EAPPQ56P03 285 aaPredicted RBP15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 NUP133Q8WUM0 1156 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 GLIS2Q9BZE0 524 aaPredicted RBP15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 MAD2L2Q9UI95 211 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 SYNPO2Q9UMS6 1093 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 FZD1Q9UP38 647 aa15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 BAZ2BQ9UIF8 2168 aaKnown RBP15.12■□□□□ 0.01
CCDC144CP-203ENST00000580574 PTPDC1A2A3K4 754 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms