RNA–Protein interactions for RNA: ENST00000579557.5

NUP85-212, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-212ENST00000579557 REPS2Q8NFH8 660 aa11.26□□□□□ -0.61
NUP85-212ENST00000579557 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
NUP85-212ENST00000579557 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
NUP85-212ENST00000579557 MKNK2Q9HBH9 465 aa11.26□□□□□ -0.61
NUP85-212ENST00000579557 SENP2Q9HC62 589 aa11.26□□□□□ -0.61
NUP85-212ENST00000579557 ZFYVE28Q9HCC9 887 aa11.26□□□□□ -0.61
NUP85-212ENST00000579557 CABP5Q9NP86 173 aa11.26□□□□□ -0.61
NUP85-212ENST00000579557 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
NUP85-212ENST00000579557 BTBD7Q9P203 1132 aa11.26□□□□□ -0.61
NUP85-212ENST00000579557 ANTXR2P58335 489 aa11.25□□□□□ -0.61
NUP85-212ENST00000579557 HERVK_113P62684 666 aa11.25□□□□□ -0.61
NUP85-212ENST00000579557 SP3Q02447 781 aa11.25□□□□□ -0.61
NUP85-212ENST00000579557 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
NUP85-212ENST00000579557 LRRC47Q8N1G4 583 aaKnown RBP11.25□□□□□ -0.61
NUP85-212ENST00000579557 MCOLN1Q9GZU1 580 aa11.25□□□□□ -0.61
NUP85-212ENST00000579557 RPAP3Q9H6T3 665 aaPredicted RBP11.25□□□□□ -0.61
NUP85-212ENST00000579557 TCP11L1Q9NUJ3 509 aa11.25□□□□□ -0.61
NUP85-212ENST00000579557 ZSWIM5Q9P217 1185 aa11.25□□□□□ -0.61
NUP85-212ENST00000579557 CLIP2Q9UDT6 1046 aa11.25□□□□□ -0.61
NUP85-212ENST00000579557 F5H6K3 240 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 IGHA2P01877 340 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 PDE4BQ07343 736 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 KLRC3Q07444 240 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
NUP85-212ENST00000579557 SEC23AQ15436 765 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 SLC35G1Q2M3R5 365 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 OTUD7BQ6GQQ9 843 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 ZNF444Q8N0Y2 327 aaPredicted RBP11.24□□□□□ -0.61
NUP85-212ENST00000579557 ANKRD13CQ8N6S4 541 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 ANKS1AQ92625 1134 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 KCNB2Q92953 911 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 PARK7Q99497 189 aaKnown RBP11.24□□□□□ -0.61
NUP85-212ENST00000579557 PORCNQ9H237 461 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
NUP85-212ENST00000579557 GJD2Q9UKL4 321 aa11.24□□□□□ -0.61
NUP85-212ENST00000579557 RBM8AQ9Y5S9 174 aaKnown RBP11.24□□□□□ -0.61
NUP85-212ENST00000579557 B4E1Z4 1266 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 ZNF213O14771 459 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 CDC45O75419 566 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP14P54578 494 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 FAM83BQ5T0W9 1011 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 CTU1Q7Z7A3 348 aaKnown RBP11.23□□□□□ -0.61
NUP85-212ENST00000579557 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 GMCL1P1Q8NEA9 526 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 USP6NLQ92738 828 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 ATG4CQ96DT6 458 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 TMEM47Q9BQJ4 181 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 TMOD4Q9NZQ9 345 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 GABRQQ9UN88 632 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
NUP85-212ENST00000579557 E7EWF7 191 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 SLC27A2O14975 620 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 WDR46O15213 610 aaKnown RBP11.22□□□□□ -0.61
NUP85-212ENST00000579557 RANBP6O60518 1105 aaKnown RBP11.22□□□□□ -0.61
NUP85-212ENST00000579557 KDM4AO75164 1064 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 TTLL1O95922 423 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 TSPY3P0CV98 308 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 TSPY8P0CW00 308 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 SNHG28P0DPA3 235 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 DSG3P32926 999 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 FAM110CQ1W6H9 321 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 MFSD6Q6ZSS7 791 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 MB21D2Q8IYB1 491 aaPredicted RBP11.22□□□□□ -0.61
NUP85-212ENST00000579557 ENAHQ8N8S7 591 aaPredicted RBP11.22□□□□□ -0.61
NUP85-212ENST00000579557 LPAR1Q92633 364 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 FEZ1Q99689 392 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 ZKSCAN3Q9BRR0 538 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 PTPN22Q9Y2R2 807 aa11.22□□□□□ -0.61
NUP85-212ENST00000579557 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
NUP85-212ENST00000579557 MGAMO43451 1857 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
NUP85-212ENST00000579557 PCP11498 1178 aaKnown RBP11.21□□□□□ -0.61
NUP85-212ENST00000579557 OSBPP22059 807 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 PSMC4P43686 418 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 ERVK-9P63128 1117 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 ERVK-24P63145 666 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 ATP2B2Q01814 1243 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 TMEM132BQ14DG7 1078 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 RRP12Q5JTH9 1297 aaKnown RBP11.21□□□□□ -0.61
NUP85-212ENST00000579557 CREB3L3Q68CJ9 461 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 TTBK2Q6IQ55 1244 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 RUFY2Q8WXA3 655 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 GMCL1Q96IK5 515 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.61
NUP85-212ENST00000579557 ZNF214Q9UL59 606 aaPredicted RBP11.21□□□□□ -0.61
NUP85-212ENST00000579557 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
NUP85-212ENST00000579557 ZNF536O15090 1300 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms