RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 RPAP3Q9H6T3 665 aaPredicted RBP28.44■■■□□ 2.14
LIMD2-207ENST00000579329 HOXD10P28358 340 aa28.43■■■□□ 2.14
LIMD2-207ENST00000579329 CTDSPL2Q05D32 466 aa28.43■■■□□ 2.14
LIMD2-207ENST00000579329 VCPKMTQ9H867 229 aa28.43■■■□□ 2.14
LIMD2-207ENST00000579329 MORF4L1Q9UBU8 362 aa28.43■■■□□ 2.14
LIMD2-207ENST00000579329 CENPFP49454 3210 aa28.43■■■□□ 2.14
LIMD2-207ENST00000579329 PLIN4Q96Q06 1357 aa28.42■■■□□ 2.14
LIMD2-207ENST00000579329 CCDC136Q96JN2 1154 aa28.42■■■□□ 2.14
LIMD2-207ENST00000579329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.42■■■□□ 2.14
LIMD2-207ENST00000579329 MKI67P46013 3256 aaKnown RBP28.42■■■□□ 2.14
LIMD2-207ENST00000579329 IGKV6D-41A0A0C4DH26 115 aa28.41■■■□□ 2.14
LIMD2-207ENST00000579329 TSPY3P0CV98 308 aa28.41■■■□□ 2.14
LIMD2-207ENST00000579329 TSPY8P0CW00 308 aa28.41■■■□□ 2.14
LIMD2-207ENST00000579329 NYAP2Q9P242 653 aa28.41■■■□□ 2.14
LIMD2-207ENST00000579329 SRRDQ9UH36 339 aa28.41■■■□□ 2.14
LIMD2-207ENST00000579329 PTCH2Q9Y6C5 1203 aa28.41■■■□□ 2.14
LIMD2-207ENST00000579329 MGAMO43451 1857 aa28.4■■■□□ 2.14
LIMD2-207ENST00000579329 NEDD1Q8NHV4 660 aa28.4■■■□□ 2.14
LIMD2-207ENST00000579329 GOPCQ9HD26 462 aa28.4■■■□□ 2.14
LIMD2-207ENST00000579329 RAD50Q92878 1312 aa28.4■■■□□ 2.14
LIMD2-207ENST00000579329 TNPO2O14787 897 aaKnown RBP28.39■■■□□ 2.14
LIMD2-207ENST00000579329 KIAA1755Q5JYT7 1200 aa28.39■■■□□ 2.14
LIMD2-207ENST00000579329 TANGO6Q9C0B7 1094 aa28.39■■■□□ 2.14
LIMD2-207ENST00000579329 MYPNQ86TC9 1320 aa28.39■■■□□ 2.13
LIMD2-207ENST00000579329 WDR46O15213 610 aaKnown RBP28.38■■■□□ 2.13
LIMD2-207ENST00000579329 TFAP4Q01664 338 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 FAM47AQ5JRC9 791 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 SPICE1Q8N0Z3 855 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 GPRC5AQ8NFJ5 357 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 RUFY2Q8WXA3 655 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 PAGR1Q9BTK6 254 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 DSCC1Q9BVC3 393 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 TXNRD2Q9NNW7 524 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 RBPJLQ9UBG7 517 aa28.38■■■□□ 2.13
LIMD2-207ENST00000579329 POTEFA5A3E0 1075 aa28.37■■■□□ 2.13
LIMD2-207ENST00000579329 ORC4O43929 436 aa28.37■■■□□ 2.13
LIMD2-207ENST00000579329 CHMLP26374 656 aa28.37■■■□□ 2.13
LIMD2-207ENST00000579329 LBX2Q6XYB7 198 aa28.37■■■□□ 2.13
LIMD2-207ENST00000579329 CEP95Q96GE4 821 aa28.37■■■□□ 2.13
LIMD2-207ENST00000579329 MTMR4Q9NYA4 1195 aa28.37■■■□□ 2.13
LIMD2-207ENST00000579329 TSPY2A6NKD2 308 aa28.36■■■□□ 2.13
LIMD2-207ENST00000579329 FGRP09769 529 aa28.36■■■□□ 2.13
LIMD2-207ENST00000579329 HAND2P61296 217 aa28.36■■■□□ 2.13
LIMD2-207ENST00000579329 COA7Q96BR5 231 aa28.36■■■□□ 2.13
LIMD2-207ENST00000579329 CLIP2Q9UDT6 1046 aa28.36■■■□□ 2.13
LIMD2-207ENST00000579329 RABGAP1Q9Y3P9 1069 aa28.36■■■□□ 2.13
LIMD2-207ENST00000579329 SPDYE16A6NNV3 312 aaPredicted RBP28.35■■■□□ 2.13
LIMD2-207ENST00000579329 TTLL1O95922 423 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 ERVK-9P63128 1117 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 ERVK-24P63145 666 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 PRKCZQ05513 592 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 COG2Q14746 738 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 PPP4R3BQ5MIZ7 849 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 INCENPQ9NQS7 918 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 TOMM22Q9NS69 142 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 HOXC10Q9NYD6 342 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 SYNPO2Q9UMS6 1093 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 TACC3Q9Y6A5 838 aa28.35■■■□□ 2.13
LIMD2-207ENST00000579329 RAD21O60216 631 aa28.34■■■□□ 2.13
LIMD2-207ENST00000579329 RANBP6O60518 1105 aaKnown RBP28.34■■■□□ 2.13
LIMD2-207ENST00000579329 PCP11498 1178 aaKnown RBP28.34■■■□□ 2.13
LIMD2-207ENST00000579329 SLC9C1Q4G0N8 1177 aa28.34■■■□□ 2.13
LIMD2-207ENST00000579329 POTEEQ6S8J3 1075 aa28.34■■■□□ 2.13
LIMD2-207ENST00000579329 RAET1EQ8TD07 263 aa28.34■■■□□ 2.13
LIMD2-207ENST00000579329 ARMC5Q96C12 935 aa28.34■■■□□ 2.13
LIMD2-207ENST00000579329 IL25Q9H293 177 aa28.34■■■□□ 2.13
LIMD2-207ENST00000579329 BRCA2P51587 3418 aa28.33■■■□□ 2.13
LIMD2-207ENST00000579329 ZNF213O14771 459 aa28.33■■■□□ 2.13
LIMD2-207ENST00000579329 PEX10O60683 326 aa28.33■■■□□ 2.13
LIMD2-207ENST00000579329 FLOT1O75955 427 aa28.33■■■□□ 2.13
LIMD2-207ENST00000579329 MKL1Q969V6 931 aa28.33■■■□□ 2.13
LIMD2-207ENST00000579329 RNF41Q9H4P4 317 aaPredicted RBP28.33■■■□□ 2.13
LIMD2-207ENST00000579329 CTNNA3Q9UI47 895 aa28.33■■■□□ 2.13
LIMD2-207ENST00000579329 LAMA4Q16363 1823 aa28.32■■■□□ 2.12
LIMD2-207ENST00000579329 MYH4Q9Y623 1939 aa28.32■■■□□ 2.12
LIMD2-207ENST00000579329 CNMDO75829 334 aa28.32■■■□□ 2.12
LIMD2-207ENST00000579329 RRP12Q5JTH9 1297 aaKnown RBP28.32■■■□□ 2.12
LIMD2-207ENST00000579329 AKNAD1Q5T1N1 836 aa28.32■■■□□ 2.12
LIMD2-207ENST00000579329 NBPF11Q86T75 865 aa28.32■■■□□ 2.12
LIMD2-207ENST00000579329 TBC1D10CQ8IV04 446 aa28.32■■■□□ 2.12
LIMD2-207ENST00000579329 STAG1Q8WVM7 1258 aa28.32■■■□□ 2.12
LIMD2-207ENST00000579329 GABRQQ9UN88 632 aa28.32■■■□□ 2.12
LIMD2-207ENST00000579329 F5H6K3 240 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 MAPK4P31152 587 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 DSG3P32926 999 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 FLT3LGP49771 235 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 CCNA1P78396 465 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 KLRC3Q07444 240 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 Q3C1V9 767 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 MFSD6Q6ZSS7 791 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 SKAP1Q86WV1 359 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 CCAR1Q8IX12 1150 aaKnown RBP28.31■■■□□ 2.12
LIMD2-207ENST00000579329 NBPF3Q9H094 633 aa28.31■■■□□ 2.12
LIMD2-207ENST00000579329 NDUFB10O96000 172 aa28.3■■■□□ 2.12
LIMD2-207ENST00000579329 FAM83BQ5T0W9 1011 aa28.3■■■□□ 2.12
LIMD2-207ENST00000579329 LRRC47Q8N1G4 583 aaKnown RBP28.3■■■□□ 2.12
LIMD2-207ENST00000579329 MB21D1Q8N884 522 aa28.3■■■□□ 2.12
LIMD2-207ENST00000579329 IMMTQ16891 758 aaKnown RBP28.29■■■□□ 2.12
LIMD2-207ENST00000579329 BMP2KLQ5H9B9 411 aa28.29■■■□□ 2.12
LIMD2-207ENST00000579329 GMCL1P1Q8NEA9 526 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms