RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 ATN1P54259 1190 aaPredicted RBP25.44■■□□□ 1.66
TSEN54-205ENST00000578415 HNRNPUQ00839 825 aaKnown RBP eCLIP25.44■■□□□ 1.66
TSEN54-205ENST00000578415 SLC44A5Q8NCS7 719 aa25.44■■□□□ 1.66
TSEN54-205ENST00000578415 PANK1Q8TE04 598 aa25.44■■□□□ 1.66
TSEN54-205ENST00000578415 SPATC1LQ9H0A9 340 aa25.44■■□□□ 1.66
TSEN54-205ENST00000578415 DCP1AQ9NPI6 582 aaPredicted RBP25.44■■□□□ 1.66
TSEN54-205ENST00000578415 NAV1Q8NEY1 1877 aa25.43■■□□□ 1.66
TSEN54-205ENST00000578415 OLFML2BQ68BL8 750 aa25.43■■□□□ 1.66
TSEN54-205ENST00000578415 LCORLQ8N3X6 602 aa25.43■■□□□ 1.66
TSEN54-205ENST00000578415 TANGO6Q9C0B7 1094 aa25.43■■□□□ 1.66
TSEN54-205ENST00000578415 HOXC10Q9NYD6 342 aa25.43■■□□□ 1.66
TSEN54-205ENST00000578415 GOLIM4O00461 696 aa25.42■■□□□ 1.66
TSEN54-205ENST00000578415 ERCC3P19447 782 aa25.42■■□□□ 1.66
TSEN54-205ENST00000578415 HSP90AB4PQ58FF6 505 aa25.42■■□□□ 1.66
TSEN54-205ENST00000578415 DPP9Q86TI2 863 aa25.42■■□□□ 1.66
TSEN54-205ENST00000578415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.42■■□□□ 1.66
TSEN54-205ENST00000578415 COBLO75128 1261 aa25.41■■□□□ 1.66
TSEN54-205ENST00000578415 TMEM179Q6ZVK1 233 aa25.41■■□□□ 1.66
TSEN54-205ENST00000578415 SIAH1Q8IUQ4 282 aa25.41■■□□□ 1.66
TSEN54-205ENST00000578415 SHCBP1Q8NEM2 672 aa25.41■■□□□ 1.66
TSEN54-205ENST00000578415 DNAJC2Q99543 621 aaKnown RBP25.41■■□□□ 1.66
TSEN54-205ENST00000578415 ZNF236Q9UL36 1845 aa25.41■■□□□ 1.66
TSEN54-205ENST00000578415 A0A0G2JMZ2 1700 aa25.4■■□□□ 1.66
TSEN54-205ENST00000578415 STRNO43815 780 aa25.4■■□□□ 1.66
TSEN54-205ENST00000578415 RTP1P59025 263 aa25.4■■□□□ 1.66
TSEN54-205ENST00000578415 GJC2Q5T442 439 aaPredicted RBP25.4■■□□□ 1.66
TSEN54-205ENST00000578415 CLEC10AQ8IUN9 316 aa25.4■■□□□ 1.66
TSEN54-205ENST00000578415 DYNLL2Q96FJ2 89 aa25.4■■□□□ 1.66
TSEN54-205ENST00000578415 LBHD1Q9BQE6 289 aaPredicted RBP25.4■■□□□ 1.66
TSEN54-205ENST00000578415 DNAH12Q6ZR08 3092 aa25.4■■□□□ 1.66
TSEN54-205ENST00000578415 RLFQ13129 1914 aa25.39■■□□□ 1.66
TSEN54-205ENST00000578415 POTEB2H3BUK9 544 aa25.39■■□□□ 1.66
TSEN54-205ENST00000578415 DSG3P32926 999 aa25.39■■□□□ 1.66
TSEN54-205ENST00000578415 ANO1Q5XXA6 986 aa25.39■■□□□ 1.66
TSEN54-205ENST00000578415 CLASRPQ8N2M8 674 aaKnown RBP25.39■■□□□ 1.66
TSEN54-205ENST00000578415 MB21D1Q8N884 522 aa25.39■■□□□ 1.66
TSEN54-205ENST00000578415 ARMT1Q9H993 441 aa25.39■■□□□ 1.66
TSEN54-205ENST00000578415 SWAP70Q9UH65 585 aa25.39■■□□□ 1.66
TSEN54-205ENST00000578415 CUL9Q8IWT3 2517 aa25.39■■□□□ 1.65
TSEN54-205ENST00000578415 APBB1O00213 710 aa25.38■■□□□ 1.65
TSEN54-205ENST00000578415 SLFNL1Q499Z3 407 aa25.38■■□□□ 1.65
TSEN54-205ENST00000578415 ATG4CQ96DT6 458 aa25.38■■□□□ 1.65
TSEN54-205ENST00000578415 KIF1BPQ96EK5 621 aa25.38■■□□□ 1.65
TSEN54-205ENST00000578415 TMX2Q9Y320 296 aa25.38■■□□□ 1.65
TSEN54-205ENST00000578415 SMIM22K7EJ46 135 aa25.37■■□□□ 1.65
TSEN54-205ENST00000578415 SEPT4O43236 478 aa25.37■■□□□ 1.65
TSEN54-205ENST00000578415 PRKAB2O43741 272 aa25.37■■□□□ 1.65
TSEN54-205ENST00000578415 AKR1B1P15121 316 aa25.37■■□□□ 1.65
TSEN54-205ENST00000578415 FAM109BQ6ICB4 259 aaPredicted RBP25.37■■□□□ 1.65
TSEN54-205ENST00000578415 SPICE1Q8N0Z3 855 aa25.37■■□□□ 1.65
TSEN54-205ENST00000578415 ARRDC4Q8NCT1 418 aa25.37■■□□□ 1.65
TSEN54-205ENST00000578415 FLOT1O75955 427 aa25.36■■□□□ 1.65
TSEN54-205ENST00000578415 IFIT2P09913 472 aaKnown RBP25.36■■□□□ 1.65
TSEN54-205ENST00000578415 ICA1Q05084 483 aa25.36■■□□□ 1.65
TSEN54-205ENST00000578415 PLS1Q14651 629 aa25.36■■□□□ 1.65
TSEN54-205ENST00000578415 ABRAQ8N0Z2 381 aa25.36■■□□□ 1.65
TSEN54-205ENST00000578415 GUCD1Q96NT3 240 aa25.36■■□□□ 1.65
TSEN54-205ENST00000578415 MROH8Q9H579 483 aa25.36■■□□□ 1.65
TSEN54-205ENST00000578415 ATP11BQ9Y2G3 1177 aa25.36■■□□□ 1.65
TSEN54-205ENST00000578415 ADD2P35612 726 aa25.35■■□□□ 1.65
TSEN54-205ENST00000578415 PRAMEF19Q5SWL8 479 aa25.35■■□□□ 1.65
TSEN54-205ENST00000578415 SLC39A5Q6ZMH5 540 aa25.35■■□□□ 1.65
TSEN54-205ENST00000578415 NCAPG2Q86XI2 1143 aa25.35■■□□□ 1.65
TSEN54-205ENST00000578415 SIRT2Q8IXJ6 389 aa25.35■■□□□ 1.65
TSEN54-205ENST00000578415 VCPKMTQ9H867 229 aa25.35■■□□□ 1.65
TSEN54-205ENST00000578415 ARHGEF10LQ9HCE6 1279 aa25.35■■□□□ 1.65
TSEN54-205ENST00000578415 PRKAG2Q9UGJ0 569 aa25.35■■□□□ 1.65
TSEN54-205ENST00000578415 CYP2D7A0A087X1C5 515 aa25.34■■□□□ 1.65
TSEN54-205ENST00000578415 KBTBD13C9JR72 458 aa25.34■■□□□ 1.65
TSEN54-205ENST00000578415 MBD4O95243 580 aa25.34■■□□□ 1.65
TSEN54-205ENST00000578415 SNX17Q15036 470 aa25.34■■□□□ 1.65
TSEN54-205ENST00000578415 MAML3Q96JK9 1138 aa25.34■■□□□ 1.65
TSEN54-205ENST00000578415 SLC5A4Q9NY91 659 aa25.34■■□□□ 1.65
TSEN54-205ENST00000578415 CHGBP05060 677 aa25.33■■□□□ 1.65
TSEN54-205ENST00000578415 RPAP2Q8IXW5 612 aaPredicted RBP25.33■■□□□ 1.65
TSEN54-205ENST00000578415 BCL11AQ9H165 835 aa25.33■■□□□ 1.65
TSEN54-205ENST00000578415 SH2D4AQ9H788 454 aa25.33■■□□□ 1.65
TSEN54-205ENST00000578415 ATP8A2Q9NTI2 1148 aa25.33■■□□□ 1.65
TSEN54-205ENST00000578415 PAG1Q9NWQ8 432 aa25.33■■□□□ 1.65
TSEN54-205ENST00000578415 LTBP2Q14767 1821 aa25.33■■□□□ 1.64
TSEN54-205ENST00000578415 WDR46O15213 610 aaKnown RBP25.32■■□□□ 1.64
TSEN54-205ENST00000578415 CDK8P49336 464 aa25.32■■□□□ 1.64
TSEN54-205ENST00000578415 TMEM132BQ14DG7 1078 aa25.32■■□□□ 1.64
TSEN54-205ENST00000578415 TRIM60Q495X7 471 aa25.32■■□□□ 1.64
TSEN54-205ENST00000578415 FAM47AQ5JRC9 791 aa25.32■■□□□ 1.64
TSEN54-205ENST00000578415 C12orf60Q5U649 245 aa25.32■■□□□ 1.64
TSEN54-205ENST00000578415 CCDC17Q96LX7 622 aa25.32■■□□□ 1.64
TSEN54-205ENST00000578415 BOLA2Q9H3K6 86 aa25.32■■□□□ 1.64
TSEN54-205ENST00000578415 LAMA2P24043 3122 aaKnown RBP25.31■■□□□ 1.64
TSEN54-205ENST00000578415 MYCNP04198 464 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-205ENST00000578415 FCER1AP12319 257 aa25.31■■□□□ 1.64
TSEN54-205ENST00000578415 LRRC41Q15345 812 aa25.31■■□□□ 1.64
TSEN54-205ENST00000578415 SAMD1Q6SPF0 538 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-205ENST00000578415 FAM161BQ96MY7 647 aa25.31■■□□□ 1.64
TSEN54-205ENST00000578415 ADAMTS5Q9UNA0 930 aa25.31■■□□□ 1.64
TSEN54-205ENST00000578415 USP17L12C9JPN9 530 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 USP17L21D6R901 530 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 HMMRO75330 724 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 ATP5JP18859 108 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 ADCYAP1R1P41586 468 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms