RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 PCDHB6Q9Y5E3 794 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 PLIN4Q96Q06 1357 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 TTLL6Q8N841 843 aa31.82■■■□□ 2.68
LIMD2-203ENST00000578067 SCN9AQ15858 1988 aa31.82■■■□□ 2.68
LIMD2-203ENST00000578067 FAM237AA0A1B0GTK4 181 aa31.82■■■□□ 2.68
LIMD2-203ENST00000578067 CAVIN2O95810 425 aa31.82■■■□□ 2.68
LIMD2-203ENST00000578067 RESP18Q5W5W9 173 aa31.82■■■□□ 2.68
LIMD2-203ENST00000578067 HPSEQ9Y251 543 aa31.82■■■□□ 2.68
LIMD2-203ENST00000578067 NLRP5P59047 1200 aa31.81■■■□□ 2.68
LIMD2-203ENST00000578067 TNFRSF25Q93038 417 aa31.81■■■□□ 2.68
LIMD2-203ENST00000578067 SH3GLB2Q9NR46 395 aa31.81■■■□□ 2.68
LIMD2-203ENST00000578067 HLA-DOAP06340 250 aa31.8■■■□□ 2.68
LIMD2-203ENST00000578067 CLIC6Q96NY7 704 aa31.8■■■□□ 2.68
LIMD2-203ENST00000578067 MTMR7Q9Y216 660 aa31.8■■■□□ 2.68
LIMD2-203ENST00000578067 PPIP5K2O43314 1243 aa31.8■■■□□ 2.68
LIMD2-203ENST00000578067 HS1BP3Q53T59 392 aa31.8■■■□□ 2.68
LIMD2-203ENST00000578067 TIGD1Q96MW7 591 aa31.8■■■□□ 2.68
LIMD2-203ENST00000578067 CBX8Q9HC52 389 aa31.8■■■□□ 2.68
LIMD2-203ENST00000578067 MYO3BQ8WXR4 1341 aa31.8■■■□□ 2.68
LIMD2-203ENST00000578067 ZNF646O15015 1829 aaPredicted RBP31.79■■■□□ 2.68
LIMD2-203ENST00000578067 VEGFAP15692 232 aaPredicted RBP31.79■■■□□ 2.68
LIMD2-203ENST00000578067 NFIAQ12857 509 aa31.79■■■□□ 2.68
LIMD2-203ENST00000578067 STX1AQ16623 288 aa31.79■■■□□ 2.68
LIMD2-203ENST00000578067 EARS2Q5JPH6 523 aaKnown RBP31.79■■■□□ 2.68
LIMD2-203ENST00000578067 SERPINA10Q9UK55 444 aa31.79■■■□□ 2.68
LIMD2-203ENST00000578067 NOL7Q9UMY1 257 aaKnown RBP31.79■■■□□ 2.68
LIMD2-203ENST00000578067 FAM205CA6NFA0 338 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 ATP2B1P20020 1258 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 PTPREP23469 700 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 SYKP43405 635 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 RBM5P52756 815 aaKnown RBP eCLIP31.78■■■□□ 2.68
LIMD2-203ENST00000578067 DNAJC25Q9H1X3 360 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 FBXO2Q9UK22 296 aaPredicted RBP31.78■■■□□ 2.68
LIMD2-203ENST00000578067 TRIM75PA6NK02 468 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 CALML3P27482 149 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 SLC35G1Q2M3R5 365 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 CCDC93Q567U6 631 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 MTMR4Q9NYA4 1195 aa31.78■■■□□ 2.68
LIMD2-203ENST00000578067 MORC2Q9Y6X9 1032 aaPredicted RBP31.78■■■□□ 2.68
LIMD2-203ENST00000578067 KLRF2D3W0D1 207 aa31.77■■■□□ 2.68
LIMD2-203ENST00000578067 CYTH3O43739 400 aa31.77■■■□□ 2.68
LIMD2-203ENST00000578067 PARP1P09874 1014 aaKnown RBP31.77■■■□□ 2.68
LIMD2-203ENST00000578067 AKR1B1P15121 316 aa31.77■■■□□ 2.68
LIMD2-203ENST00000578067 ZNF165P49910 485 aa31.77■■■□□ 2.68
LIMD2-203ENST00000578067 RTKN2Q8IZC4 609 aa31.77■■■□□ 2.68
LIMD2-203ENST00000578067 PCDHAC2Q9Y5I4 1007 aa31.77■■■□□ 2.68
LIMD2-203ENST00000578067 LUZP1Q86V48 1076 aa31.76■■■□□ 2.68
LIMD2-203ENST00000578067 SPZ1Q9BXG8 430 aa31.76■■■□□ 2.68
LIMD2-203ENST00000578067 EHD4Q9H223 541 aa31.76■■■□□ 2.68
LIMD2-203ENST00000578067 IGKV6D-41A0A0C4DH26 115 aa31.76■■■□□ 2.67
LIMD2-203ENST00000578067 ADCY5O95622 1261 aa31.76■■■□□ 2.67
LIMD2-203ENST00000578067 IDI2Q9BXS1 227 aa31.76■■■□□ 2.67
LIMD2-203ENST00000578067 GOLGA8HP0CJ92 632 aa31.75■■■□□ 2.67
LIMD2-203ENST00000578067 SHMT1P34896 483 aa31.75■■■□□ 2.67
LIMD2-203ENST00000578067 RTN4Q9NQC3 1192 aaKnown RBP31.75■■■□□ 2.67
LIMD2-203ENST00000578067 ANO10Q9NW15 660 aa31.75■■■□□ 2.67
LIMD2-203ENST00000578067 KIAA1468Q9P260 1216 aa31.75■■■□□ 2.67
LIMD2-203ENST00000578067 SRPRBQ9Y5M8 271 aaKnown RBP31.75■■■□□ 2.67
LIMD2-203ENST00000578067 YDJCA8MPS7 323 aa31.75■■■□□ 2.67
LIMD2-203ENST00000578067 ESPNB1AK53 854 aa31.75■■■□□ 2.67
LIMD2-203ENST00000578067 ZNF579Q8NAF0 562 aaKnown RBP31.75■■■□□ 2.67
LIMD2-203ENST00000578067 GPKOWQ92917 476 aaPredicted RBP eCLIP31.75■■■□□ 2.67
LIMD2-203ENST00000578067 DHX36Q9H2U1 1008 aaKnown RBP31.75■■■□□ 2.67
LIMD2-203ENST00000578067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP31.74■■■□□ 2.67
LIMD2-203ENST00000578067 DPEP1P16444 411 aa31.74■■■□□ 2.67
LIMD2-203ENST00000578067 KCNA3P22001 575 aa31.74■■■□□ 2.67
LIMD2-203ENST00000578067 ZFPM1Q8IX07 1006 aa31.74■■■□□ 2.67
LIMD2-203ENST00000578067 PSMD1Q99460 953 aa31.74■■■□□ 2.67
LIMD2-203ENST00000578067 BAZ2BQ9UIF8 2168 aaKnown RBP31.74■■■□□ 2.67
LIMD2-203ENST00000578067 BMP15O95972 392 aa31.73■■■□□ 2.67
LIMD2-203ENST00000578067 SMARCA1P28370 1054 aa31.73■■■□□ 2.67
LIMD2-203ENST00000578067 USP17L2Q6R6M4 530 aa31.73■■■□□ 2.67
LIMD2-203ENST00000578067 NPM3O75607 178 aaKnown RBP31.73■■■□□ 2.67
LIMD2-203ENST00000578067 CACNB3P54284 484 aa31.73■■■□□ 2.67
LIMD2-203ENST00000578067 NOM1Q5C9Z4 860 aaKnown RBP31.73■■■□□ 2.67
LIMD2-203ENST00000578067 BLIDQ8IZY5 108 aa31.73■■■□□ 2.67
LIMD2-203ENST00000578067 ERCC4Q92889 916 aaPredicted RBP31.73■■■□□ 2.67
LIMD2-203ENST00000578067 RRAGDQ9NQL2 400 aaPredicted RBP31.73■■■□□ 2.67
LIMD2-203ENST00000578067 KCNH3Q9ULD8 1083 aa31.73■■■□□ 2.67
LIMD2-203ENST00000578067 RASGRP2Q7LDG7 609 aa31.72■■■□□ 2.67
LIMD2-203ENST00000578067 FAM177A1Q8N128 213 aaPredicted RBP31.72■■■□□ 2.67
LIMD2-203ENST00000578067 FAM13BQ9NYF5 915 aa31.72■■■□□ 2.67
LIMD2-203ENST00000578067 FAM198AQ9UFP1 575 aa31.72■■■□□ 2.67
LIMD2-203ENST00000578067 PCDHA4Q9UN74 947 aa31.72■■■□□ 2.67
LIMD2-203ENST00000578067 TRAPPC10P48553 1259 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 PLCB2Q00722 1185 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 WWC2Q6AWC2 1192 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 CCDC148Q8NFR7 591 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 CCDC39Q9UFE4 941 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 AP5Z1O43299 807 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 TCP10Q12799 353 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 TTC38Q5R3I4 469 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 C11orf57Q6ZUT1 292 aaPredicted RBP31.71■■■□□ 2.67
LIMD2-203ENST00000578067 BARHL2Q9NY43 387 aa31.71■■■□□ 2.67
LIMD2-203ENST00000578067 TTLL1O95922 423 aa31.7■■■□□ 2.67
LIMD2-203ENST00000578067 GRIN1Q05586 938 aa31.7■■■□□ 2.67
LIMD2-203ENST00000578067 PIK3AP1Q6ZUJ8 805 aa31.7■■■□□ 2.67
LIMD2-203ENST00000578067 MYH8P13535 1937 aa31.7■■■□□ 2.66
LIMD2-203ENST00000578067 USP17L5A8MUK1 530 aa31.7■■■□□ 2.66
LIMD2-203ENST00000578067 GALNT17Q6IS24 598 aa31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms