RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 MAP2K5Q13163 448 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 MAP3K21Q5TCX8 1036 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 ANKLE1Q8NAG6 615 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 DIS3LQ8TF46 1054 aaKnown RBP17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 CCDC17Q96LX7 622 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 TANGO6Q9C0B7 1094 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 ARHGEF10LQ9HCE6 1279 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 HOXC10Q9NYD6 342 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 BTBD7Q9P203 1132 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 IVNS1ABPQ9Y6Y0 642 aa17.96■□□□□ 0.47
RN7SL560P-201ENST00000577943 FXR1P51114 621 aaKnown RBP eCLIP17.95■□□□□ 0.46
RN7SL560P-201ENST00000577943 ICA1Q05084 483 aa17.95■□□□□ 0.46
RN7SL560P-201ENST00000577943 CACNB2Q08289 660 aaPredicted RBP17.95■□□□□ 0.46
RN7SL560P-201ENST00000577943 COG2Q14746 738 aa17.95■□□□□ 0.46
RN7SL560P-201ENST00000577943 CCL14Q16627 93 aa17.95■□□□□ 0.46
RN7SL560P-201ENST00000577943 C16orf86Q6ZW13 317 aa17.95■□□□□ 0.46
RN7SL560P-201ENST00000577943 CLEC10AQ8IUN9 316 aa17.95■□□□□ 0.46
RN7SL560P-201ENST00000577943 MYH4Q9Y623 1939 aa17.94■□□□□ 0.46
RN7SL560P-201ENST00000577943 SLC15A5A6NIM6 579 aa17.94■□□□□ 0.46
RN7SL560P-201ENST00000577943 SMIM22K7EJ46 135 aa17.94■□□□□ 0.46
RN7SL560P-201ENST00000577943 PTPREP23469 700 aa17.94■□□□□ 0.46
RN7SL560P-201ENST00000577943 TSHZ3Q63HK5 1081 aa17.94■□□□□ 0.46
RN7SL560P-201ENST00000577943 CTR9Q6PD62 1173 aa17.94■□□□□ 0.46
RN7SL560P-201ENST00000577943 SH2D4AQ9H788 454 aa17.94■□□□□ 0.46
RN7SL560P-201ENST00000577943 A0A0G2JMZ2 1700 aa17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 KIAA1755Q5JYT7 1200 aa17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 KBTBD3Q8NAB2 608 aa17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 LPAR1Q92633 364 aa17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 NBPF3Q9H094 633 aa17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 ARPP21Q9UBL0 812 aaPredicted RBP17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 OGDHLQ9ULD0 1010 aa17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
RN7SL560P-201ENST00000577943 FLOT1O75955 427 aa17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 CCND3P30281 292 aaPredicted RBP17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 ATP2B2Q01814 1243 aa17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 MFSD14CQ5VZR4 134 aa17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 SIAH1Q8IUQ4 282 aa17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 STRBPQ96SI9 672 aaKnown RBP17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 VCPKMTQ9H867 229 aa17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 RBM27Q9P2N5 1060 aaKnown RBP17.92■□□□□ 0.46
RN7SL560P-201ENST00000577943 DSG3P32926 999 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 GRB14Q14449 540 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 PLS1Q14651 629 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 MB21D1Q8N884 522 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 APPBP2Q92624 585 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 OSBP2Q969R2 916 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 MOV10L1Q9BXT6 1211 aaKnown RBP17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 SPATC1LQ9H0A9 340 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 C11orf49Q9H6J7 331 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 KANSL2Q9H9L4 492 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 GREB1LQ9C091 1923 aaPredicted RBP17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 ZNF236Q9UL36 1845 aa17.91■□□□□ 0.46
RN7SL560P-201ENST00000577943 WDR46O15213 610 aaKnown RBP17.9■□□□□ 0.46
RN7SL560P-201ENST00000577943 RNF113AO15541 343 aaKnown RBP17.9■□□□□ 0.46
RN7SL560P-201ENST00000577943 ZFYP08048 801 aaPredicted RBP17.9■□□□□ 0.46
RN7SL560P-201ENST00000577943 EEF2P13639 858 aaKnown RBP17.9■□□□□ 0.46
RN7SL560P-201ENST00000577943 MNX1P50219 401 aaPredicted RBP17.9■□□□□ 0.46
RN7SL560P-201ENST00000577943 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
RN7SL560P-201ENST00000577943 FLRT1Q9NZU1 646 aa17.9■□□□□ 0.46
RN7SL560P-201ENST00000577943 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
RN7SL560P-201ENST00000577943 PLXNA1Q9UIW2 1896 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 ERC2O15083 957 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 STRNO43815 780 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 RAD21O60216 631 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 HOXC6P09630 235 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 ERCC3P19447 782 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 LRRFIP1Q32MZ4 808 aaKnown RBP17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 SBK1Q52WX2 424 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 GIMAP6Q6P9H5 292 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 DPP9Q86TI2 863 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 C7orf61Q8IZ16 206 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 NPLOC4Q8TAT6 608 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 ATG4CQ96DT6 458 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 MKNK2Q9HBH9 465 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 GOPCQ9HD26 462 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 RANBP2P49792 3224 aaKnown RBP17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 SMCHD1A6NHR9 2005 aa17.89■□□□□ 0.45
RN7SL560P-201ENST00000577943 MINDY4BA8MYZ0 360 aa17.88■□□□□ 0.45
RN7SL560P-201ENST00000577943 GPAA1O43292 621 aa17.88■□□□□ 0.45
RN7SL560P-201ENST00000577943 ADORA2AP29274 412 aa17.88■□□□□ 0.45
RN7SL560P-201ENST00000577943 CNGA1P29973 690 aa17.88■□□□□ 0.45
RN7SL560P-201ENST00000577943 LHX8Q68G74 356 aa17.88■□□□□ 0.45
RN7SL560P-201ENST00000577943 NCAPG2Q86XI2 1143 aa17.88■□□□□ 0.45
RN7SL560P-201ENST00000577943 SHCBP1Q8NEM2 672 aa17.88■□□□□ 0.45
RN7SL560P-201ENST00000577943 TTC41PQ6P2S7 1318 aa17.88■□□□□ 0.45
RN7SL560P-201ENST00000577943 APPP05067 770 aa17.87■□□□□ 0.45
RN7SL560P-201ENST00000577943 GNAT2P19087 354 aa17.87■□□□□ 0.45
RN7SL560P-201ENST00000577943 TDO2P48775 406 aa17.87■□□□□ 0.45
RN7SL560P-201ENST00000577943 RRP1P56182 461 aaKnown RBP17.87■□□□□ 0.45
RN7SL560P-201ENST00000577943 RASA1P20936 1047 aa17.86■□□□□ 0.45
RN7SL560P-201ENST00000577943 CYP2C19P33261 490 aa17.86■□□□□ 0.45
RN7SL560P-201ENST00000577943 PRO3102Q9H379 93 aa17.86■□□□□ 0.45
RN7SL560P-201ENST00000577943 MROH8Q9H579 483 aa17.86■□□□□ 0.45
RN7SL560P-201ENST00000577943 SLC5A4Q9NY91 659 aa17.86■□□□□ 0.45
RN7SL560P-201ENST00000577943 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
RN7SL560P-201ENST00000577943 STAP2Q9UGK3 403 aa17.86■□□□□ 0.45
RN7SL560P-201ENST00000577943 ZMYND8Q9ULU4 1186 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms