RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 SYNGAP1Q96PV0 1343 aa16.66■□□□□ 0.26
SREBF1-217ENST00000577897 SEMA3EO15041 775 aa16.65■□□□□ 0.26
SREBF1-217ENST00000577897 SGSM2O43147 1006 aa16.65■□□□□ 0.26
SREBF1-217ENST00000577897 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-217ENST00000577897 MAP2K5Q13163 448 aa16.65■□□□□ 0.26
SREBF1-217ENST00000577897 GJC2Q5T442 439 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-217ENST00000577897 PPM1EQ8WY54 764 aa16.65■□□□□ 0.26
SREBF1-217ENST00000577897 RNPC3Q96LT9 517 aaKnown RBP16.65■□□□□ 0.26
SREBF1-217ENST00000577897 FLRT1Q9NZU1 646 aa16.65■□□□□ 0.26
SREBF1-217ENST00000577897 MYO9BQ13459 2157 aa16.65■□□□□ 0.26
SREBF1-217ENST00000577897 K7ELQ4 463 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-217ENST00000577897 MSCO60682 206 aa16.64■□□□□ 0.25
SREBF1-217ENST00000577897 MAP4K4O95819 1239 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-217ENST00000577897 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-217ENST00000577897 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
SREBF1-217ENST00000577897 BACE1P56817 501 aa16.64■□□□□ 0.25
SREBF1-217ENST00000577897 GRIN2CQ14957 1233 aa16.64■□□□□ 0.25
SREBF1-217ENST00000577897 TRIM60Q495X7 471 aa16.64■□□□□ 0.25
SREBF1-217ENST00000577897 ATG9AQ7Z3C6 839 aa16.64■□□□□ 0.25
SREBF1-217ENST00000577897 EDC3Q96F86 508 aaKnown RBP16.64■□□□□ 0.25
SREBF1-217ENST00000577897 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
SREBF1-217ENST00000577897 RHBDL3P58872 404 aa16.63■□□□□ 0.25
SREBF1-217ENST00000577897 SLC39A5Q6ZMH5 540 aa16.63■□□□□ 0.25
SREBF1-217ENST00000577897 HAUS7Q99871 368 aa16.63■□□□□ 0.25
SREBF1-217ENST00000577897 PDLIM7Q9NR12 457 aa16.63■□□□□ 0.25
SREBF1-217ENST00000577897 ARIH1Q9Y4X5 557 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-217ENST00000577897 KBTBD13C9JR72 458 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 ADORA1P30542 326 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 CYP2C19P33261 490 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 ATP2B2Q01814 1243 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 RNF20Q5VTR2 975 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 ANO1Q5XXA6 986 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
SREBF1-217ENST00000577897 SH3RF1Q7Z6J0 888 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-217ENST00000577897 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
SREBF1-217ENST00000577897 DBNLQ9UJU6 430 aaKnown RBP16.62■□□□□ 0.25
SREBF1-217ENST00000577897 RLFQ13129 1914 aa16.61■□□□□ 0.25
SREBF1-217ENST00000577897 GPR75-ASB3A0A0A6YYF3 556 aa16.61■□□□□ 0.25
SREBF1-217ENST00000577897 A0A1B0GUL7 405 aa16.61■□□□□ 0.25
SREBF1-217ENST00000577897 MECOMQ03112 1051 aa16.61■□□□□ 0.25
SREBF1-217ENST00000577897 RASGRF1Q13972 1273 aa16.61■□□□□ 0.25
SREBF1-217ENST00000577897 TTC39AQ5SRH9 613 aa16.61■□□□□ 0.25
SREBF1-217ENST00000577897 SPTY2D1Q68D10 685 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-217ENST00000577897 ADAMTS19Q8TE59 1207 aa16.61■□□□□ 0.25
SREBF1-217ENST00000577897 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-217ENST00000577897 ATXN2LQ8WWM7 1075 aaKnown RBP16.61■□□□□ 0.25
SREBF1-217ENST00000577897 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-217ENST00000577897 TRIM43BA6NCK2 446 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 C19orf81C9J6K1 198 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 USP17L10C9JJH3 530 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 ASNSP08243 561 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 DNAJB2P25686 324 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 TRIM43Q96BQ3 446 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-217ENST00000577897 KIF2CQ99661 725 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 DBNDD2Q9BQY9 259 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
SREBF1-217ENST00000577897 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
SREBF1-217ENST00000577897 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
SREBF1-217ENST00000577897 GDF11O95390 407 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 HSPA4P34932 840 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 CCNA1P78396 465 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 JAG1P78504 1218 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 SHROOM1Q2M3G4 852 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-217ENST00000577897 POTEEQ6S8J3 1075 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 NPLOC4Q8TAT6 608 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 FERMT2Q96AC1 680 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 IL17RAQ96F46 866 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 UHRF1Q96T88 793 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-217ENST00000577897 C1QTNF1Q9BXJ1 281 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 TLR7Q9NYK1 1049 aaKnown RBP16.59■□□□□ 0.25
SREBF1-217ENST00000577897 THEGQ9P2T0 379 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 IVNS1ABPQ9Y6Y0 642 aa16.59■□□□□ 0.25
SREBF1-217ENST00000577897 MUC6Q6W4X9 2439 aa16.58■□□□□ 0.25
SREBF1-217ENST00000577897 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
SREBF1-217ENST00000577897 ZFYP08048 801 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-217ENST00000577897 EPHB4P54760 987 aa16.58■□□□□ 0.24
SREBF1-217ENST00000577897 ZSCAN25Q6NSZ9 544 aa16.58■□□□□ 0.24
SREBF1-217ENST00000577897 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
SREBF1-217ENST00000577897 KBTBD3Q8NAB2 608 aa16.58■□□□□ 0.24
SREBF1-217ENST00000577897 ASB2Q96Q27 587 aa16.58■□□□□ 0.24
SREBF1-217ENST00000577897 GAS2L1Q99501 681 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-217ENST00000577897 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
SREBF1-217ENST00000577897 ZNF576Q9H609 170 aa16.58■□□□□ 0.24
SREBF1-217ENST00000577897 CNMDO75829 334 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 UQCRFS1P1P0C7P4 283 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 CYBAP13498 195 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 PTPREP23469 700 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 ITGB8P26012 769 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 PSMA5P28066 241 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 ADCYAP1R1P41586 468 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 TIMM10P62072 90 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-217ENST00000577897 ZYXQ15942 572 aaKnown RBP16.57■□□□□ 0.24
SREBF1-217ENST00000577897 ZNF384Q8TF68 577 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms