RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 PBX4Q9BYU1 374 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 AKAP2Q9Y2D5 859 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 FLT1P17948 1338 aa17.38■□□□□ 0.37
PPP4R1-206ENST00000577779 SPDYE16A6NNV3 312 aaPredicted RBP17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 ADGRE1Q14246 886 aa17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 NEUROD6Q96NK8 337 aa17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.37■□□□□ 0.372e-13■■■■□ 22.1
PPP4R1-206ENST00000577779 TSPYL2Q9H2G4 693 aaPredicted RBP17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 XPNPEP3Q9NQH7 507 aa17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 SLC5A4Q9NY91 659 aa17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 SAP30BPQ9UHR5 308 aaKnown RBP17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 CDK5RAP2Q96SN8 1893 aa17.37■□□□□ 0.37
PPP4R1-206ENST00000577779 GRXCR1A8MXD5 290 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 HLA-DOAP06340 250 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 TFCP2Q12800 502 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 GORABQ5T7V8 394 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 RNF180Q86T96 592 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 SLC44A5Q8NCS7 719 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 MOV10L1Q9BXT6 1211 aaKnown RBP17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 KIAA1683Q9H0B3 1180 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 SMCHD1A6NHR9 2005 aa17.36■□□□□ 0.37
PPP4R1-206ENST00000577779 FOCADQ5VW36 1801 aa17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 A0A1W2PQ45 241 aaPredicted RBP17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 A0A1W2PQY0 241 aa17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 COBLO75128 1261 aa17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 RARBP10826 455 aa17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 FAAP100Q0VG06 881 aa17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 CXXC1Q9P0U4 656 aaPredicted RBP17.35■□□□□ 0.37
PPP4R1-206ENST00000577779 DCDC2CA8MYV0 355 aa17.34■□□□□ 0.37
PPP4R1-206ENST00000577779 PGK1P00558 417 aa17.34■□□□□ 0.37
PPP4R1-206ENST00000577779 TIMP1P01033 207 aa17.34■□□□□ 0.37
PPP4R1-206ENST00000577779 CCDC174Q6PII3 467 aa17.34■□□□□ 0.37
PPP4R1-206ENST00000577779 LRFN3Q9BTN0 628 aa17.34■□□□□ 0.37
PPP4R1-206ENST00000577779 BMP1P13497 986 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 ERCC3P19447 782 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 PPP4CP60510 307 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 PPIGQ13427 754 aaKnown RBP eCLIP17.33■□□□□ 0.361e-10■□□□□ 10.2
PPP4R1-206ENST00000577779 ANKRD33Q7Z3H0 272 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 SHCBP1Q8NEM2 672 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 ACER1Q8TDN7 264 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 TOX2Q96NM4 488 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 SPATC1LQ9H0A9 340 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 MSRAQ9UJ68 235 aa17.33■□□□□ 0.36
PPP4R1-206ENST00000577779 ARID4AP29374 1257 aaPredicted RBP17.32■□□□□ 0.36
PPP4R1-206ENST00000577779 TMEM240Q5SV17 173 aa17.32■□□□□ 0.36
PPP4R1-206ENST00000577779 MFSD5Q6N075 450 aa17.32■□□□□ 0.36
PPP4R1-206ENST00000577779 SSH1Q8WYL5 1049 aa17.32■□□□□ 0.36
PPP4R1-206ENST00000577779 MAML3Q96JK9 1138 aa17.32■□□□□ 0.36
PPP4R1-206ENST00000577779 MCAMP43121 646 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 TFF2Q03403 129 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 RAB30Q15771 203 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 AAK1Q2M2I8 961 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 RASIP1Q5U651 963 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 C16orf59Q7L2K0 433 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 ADGRA1Q86SQ6 560 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 ABRAQ8N0Z2 381 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 MROH8Q9H579 483 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 STARD7Q9NQZ5 370 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 HOXC10Q9NYD6 342 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 NRBP1Q9UHY1 535 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 HDAC5Q9UQL6 1122 aa17.31■□□□□ 0.36
PPP4R1-206ENST00000577779 PLS1Q14651 629 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 COG2Q14746 738 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 ABCB5Q2M3G0 1257 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 TMEM31Q5JXX7 168 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 NCAPG2Q86XI2 1143 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 MICALL1Q8N3F8 863 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 TANGO6Q9C0B7 1094 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 EPHX3Q9H6B9 360 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 TBX21Q9UL17 535 aa17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.3■□□□□ 0.36
PPP4R1-206ENST00000577779 MYH1P12882 1939 aa17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 UQCRFS1P1P0C7P4 283 aa17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 ACLYP53396 1101 aa17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 CERKLQ49MI3 558 aaPredicted RBP17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 PSRC1Q6PGN9 363 aaPredicted RBP17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 NUP133Q8WUM0 1156 aa17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 TSEN34Q9BSV6 310 aaKnown RBP17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 NKX2-4Q9H2Z4 354 aa17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 SLC28A3Q9HAS3 691 aa17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 MRS2Q9HD23 443 aa17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
PPP4R1-206ENST00000577779 A0A0G2JMZ2 1700 aa17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 ZNFX1Q9P2E3 1918 aaKnown RBP17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 ACRP10323 421 aa17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 FCER1AP12319 257 aa17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 CSF2RAP15509 400 aa17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 KCNQ1P51787 676 aa17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 ZNF365Q70YC5 407 aa17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 TMEM199Q8N511 208 aa17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 LENG1Q96BZ8 264 aaPredicted RBP17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 SNRKQ9NRH2 765 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms