RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 ZNF287Q9HBT7 754 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 TCP11L1Q9NUJ3 509 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 USP40Q9NVE5 1235 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 RBM28Q9NW13 759 aaKnown RBP15.85■□□□□ 0.13
RNF43-202ENST00000577625 COL4A5P29400 1685 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 YDJCA8MPS7 323 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 TSPY3P0CV98 308 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 TSPY8P0CW00 308 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 DGKHQ86XP1 1220 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 ZNF444Q8N0Y2 327 aaPredicted RBP15.85■□□□□ 0.13
RNF43-202ENST00000577625 ZDHHC15Q96MV8 337 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 PSMD1Q99460 953 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 MRIQ9BWK5 157 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 RNF26Q9BY78 433 aaPredicted RBP15.85■□□□□ 0.13
RNF43-202ENST00000577625 POLR3EQ9NVU0 708 aa15.85■□□□□ 0.13
RNF43-202ENST00000577625 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
RNF43-202ENST00000577625 RTKN2Q8IZC4 609 aa15.84■□□□□ 0.13
RNF43-202ENST00000577625 BICD2Q8TD16 824 aa15.84■□□□□ 0.13
RNF43-202ENST00000577625 FAM53CQ9NYF3 392 aa15.84■□□□□ 0.13
RNF43-202ENST00000577625 PCDHAC2Q9Y5I4 1007 aa15.84■□□□□ 0.13
RNF43-202ENST00000577625 FER1L6Q2WGJ9 1857 aa15.84■□□□□ 0.13
RNF43-202ENST00000577625 YEATS4O95619 227 aa15.83■□□□□ 0.13
RNF43-202ENST00000577625 HDLBPQ00341 1268 aaKnown RBP15.83■□□□□ 0.13
RNF43-202ENST00000577625 CCDC178Q5BJE1 867 aa15.83■□□□□ 0.13
RNF43-202ENST00000577625 DDX19AQ9NUU7 478 aaKnown RBP15.83■□□□□ 0.13
RNF43-202ENST00000577625 TAOK2Q9UL54 1235 aa15.83■□□□□ 0.13
RNF43-202ENST00000577625 GREB1LQ9C091 1923 aaPredicted RBP15.83■□□□□ 0.12
RNF43-202ENST00000577625 GABPAQ06546 454 aa15.83■□□□□ 0.12
RNF43-202ENST00000577625 KAT14Q9H8E8 782 aa15.83■□□□□ 0.12
RNF43-202ENST00000577625 PAXBP1Q9Y5B6 917 aa15.83■□□□□ 0.12
RNF43-202ENST00000577625 CNTNAP5Q8WYK1 1306 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 LINC00301Q8NCQ3 95 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 PNMA1Q8ND90 353 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 CTCFLQ8NI51 663 aaPredicted RBP15.82■□□□□ 0.12
RNF43-202ENST00000577625 OSBPL5Q9H0X9 879 aaPredicted RBP15.82■□□□□ 0.12
RNF43-202ENST00000577625 NUP62CLQ9H1M0 184 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 YY1AP1Q9H869 796 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 DACT1Q9NYF0 836 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 NFIAQ12857 509 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 PKN1Q16512 942 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 ZNF397Q8NF99 534 aaPredicted RBP15.82■□□□□ 0.12
RNF43-202ENST00000577625 NEDD1Q8NHV4 660 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 EFCC1Q9HA90 598 aa15.82■□□□□ 0.12
RNF43-202ENST00000577625 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
RNF43-202ENST00000577625 PLIN4Q96Q06 1357 aa15.81■□□□□ 0.12
RNF43-202ENST00000577625 ERICH4A6NGS2 130 aa15.81■□□□□ 0.12
RNF43-202ENST00000577625 PRPF3O43395 683 aaKnown RBP15.81■□□□□ 0.12
RNF43-202ENST00000577625 MMP1P03956 469 aa15.81■□□□□ 0.12
RNF43-202ENST00000577625 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
RNF43-202ENST00000577625 KCNG4Q8TDN1 519 aa15.81■□□□□ 0.12
RNF43-202ENST00000577625 FUCA2Q9BTY2 467 aa15.81■□□□□ 0.12
RNF43-202ENST00000577625 MTFR1LQ9H019 292 aa15.81■□□□□ 0.12
RNF43-202ENST00000577625 SERPINA10Q9UK55 444 aa15.81■□□□□ 0.12
RNF43-202ENST00000577625 CLIC4Q9Y696 253 aa15.81■□□□□ 0.12
RNF43-202ENST00000577625 TGFB2P61812 414 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
RNF43-202ENST00000577625 GNL2Q13823 731 aaKnown RBP15.8■□□□□ 0.12
RNF43-202ENST00000577625 STK38Q15208 465 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 ANO1Q5XXA6 986 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 SHISA4Q96DD7 197 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.8■□□□□ 0.12
RNF43-202ENST00000577625 ZNF277Q9NRM2 450 aaPredicted RBP15.8■□□□□ 0.12
RNF43-202ENST00000577625 FEZ2Q9UHY8 353 aaPredicted RBP15.8■□□□□ 0.12
RNF43-202ENST00000577625 KCNJ14Q9UNX9 436 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 MYH4Q9Y623 1939 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 NR1I2O75469 434 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 ME1P48163 572 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 SAFBQ15424 915 aaKnown RBP eCLIP15.8■□□□□ 0.12
RNF43-202ENST00000577625 MAP3K14Q99558 947 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 CLSTN2Q9H4D0 955 aa15.8■□□□□ 0.12
RNF43-202ENST00000577625 V9GY48 417 aaPredicted RBP15.8■□□□□ 0.12
RNF43-202ENST00000577625 POLD1P28340 1107 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 KIF5BP33176 963 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 RBM5P52756 815 aaKnown RBP eCLIP15.79■□□□□ 0.12
RNF43-202ENST00000577625 MAP3K11Q16584 847 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 ADALQ6DHV7 355 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 RBM43Q6ZSC3 357 aaKnown RBP15.79■□□□□ 0.12
RNF43-202ENST00000577625 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
RNF43-202ENST00000577625 CCDC112Q8NEF3 446 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 TMEM47Q9BQJ4 181 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 FOXP1Q9H334 677 aaPredicted RBP15.79■□□□□ 0.12
RNF43-202ENST00000577625 PIM2Q9P1W9 311 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 SERPINB13Q9UIV8 391 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 PCDHA7Q9UN72 937 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 STX8Q9UNK0 236 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 A0A1W2PQ27 194 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 A0A1W2PQ64 194 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 A0A1W2PQD8 194 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 SPTLC2O15270 562 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 CACNB3P54284 484 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 GRM4Q14833 912 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 ZFPM1Q8IX07 1006 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 DIS3L2Q8IYB7 885 aaKnown RBP15.79■□□□□ 0.12
RNF43-202ENST00000577625 LARGE2Q8N3Y3 721 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 IDI2Q9BXS1 227 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 TNMDQ9H2S6 317 aa15.79■□□□□ 0.12
RNF43-202ENST00000577625 MYO3BQ8WXR4 1341 aa15.78■□□□□ 0.12
RNF43-202ENST00000577625 BTBD18B2RXH4 712 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms